Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------ARR11(3)                           --------->MYB52(1)                      <------- ------->ANAC58                                   --------->ANAC58             --------->AtMYB61 ------->ANAC58                                   <---------ALFIN1           ----------->RAV1(1) --->HSFB2a(2)                  ------>ZmHOX2a(1) --------->ANAC58         --------->ZAT18   -------- ----HSFB2a(2)       --------->GLK1(2)    ------->TEIL                ---------->DOF2       <--------   gaagaaacaatatcagcgttgagaacctggtttcctccacaatgcatttggcacacatcggaactatggattcaaagagcaccaaaacgagtctatatct  14014300                                                                                                    -                                                                                               ------                                                                                      --------->ARR11(3)                                                                                      <---------ARR11(3)                                                                                     --------->GLK1(1)                                                                                     --------->CCA1(1)                                                                                     --------->RVE1(1)                                   --------->ANAC58                                  <---------CCA1(1)                                   --------->ANAC58                                  <---------GLK1(1)                       <---------At4g35610                                           <---------RVE1(1) --ARR11(3)            --------->At4g35610                                          <---------ARR11(3) ->ARR11(3)         ------->GAMYB ------>NtERF2              <----------DOF2        --------->ARR11(3) -CCA1(2)        ----------->RAV1(1)          --------->TOE2(3)          --------->YAB1        ------   ctcagttttatgccaatgccaacagagctcaaatggcacccataaaaacatcaaaacagtcttctttatagataataagaatataagatatctagcctag  14014400                                                                                   <---------bZIP60(1)                                                                                   --------->bZIP60(1)                                               --------->AHL20(2)                  <---------O2                                               --------->YAB1                      --------->O2     <------ZmHOX2a(2)                    ------>ZmHOX2a(1)                    --------->SPL7    --------->ARR11(3)            --------->TOE1(3)                          --------->TOE1(2)    <---------ARR11(3)            --------->TOE2(3)                         --------->MYB46(3)     -- --------->DOF2               --------->DOF5.7(2)                           <---------MYB52(2)     <- --->ANAC58       <---------GLK1(1)      --------->TOE2(3)    <---------ATHB12--------->MYB52(1)   <- --->ANAC58 <----------DOF2   <---------MYB52(1)    --------->AHL20(2)   --------->ZAT18       <-----   caaaaagatcgaaactttgggtttcccccttcgttacctcaatcctcaataaaaaaaaattccaatgaaacgaagtgaacgaacgacgtcgttctatttt  14014500                                                     <---------AHL20(2)          -------->HAHB4                            <---------AHL20(2)          --------->ATHB51                          --------->AHL20(2)          <---------ICU4                            <---------AHL20(1)          --------->ATHB12                          --------->ARR11(3)          <--------ATHB1                            --------->AHL20(1)         <---------ATHB12                           <---------ARR11(3)         <---------AHL20(2)                     --------->YAB1         --------->AHL20(2)               --------->ANAC58         <---------ATHB51                 --------->ANAC55(1)         --------->ICU4                   --------->ANAC58 ------->MYB59                            --------->ANAC46  <----------ID1    --------->AHL20(2) --------TOE2(3)             <----------ID1     <---------ICU4             --------->AHL20(2) --------TOE1(3)           --------->ANAC46    --------->ICU4  --------->ANAC58 ----AHL20(2)            --------->MYB52(1)    <---------ATHB12--------->ANAC58<---------AHL20(2)   ttaggttgcaaataattgaaaacaaataaacgggacaaattcacaagtaatcaatatatttagggacgaaattacaaatatttaatagaaaaacaagagt  14014600                                                                                    --------->YAB1                                                                                   <---------YAB1                                                                                   <---------AHL20(2)                                                                                  --------->AHL20(2)                                                                                  --------->AHL20(1)                                                                                  <---------AHL20(1)                                                           *TSS                --------->AHL20(2)                                                        <---------YAB1   --------->ANAC58                           <-----------GT1            ----------->GT1    --------->ANAC58                       ------>ZmHOX2a(1)              --------->YAB1     ----------->GT1               <----------DOF2                   ------------>CBF       --------->DAG2            ------>ZmHOX2a(1)       <---------ZAT14 <------------CBF   ---------->DOF2             --         ------>ZmHOX2a(1) --------->YAB1       --------->TOE2(3)   --------->AHL20(2)           <---  <---------MYB46(3)  --------->TOE2(3)         --------->TOE1(3)   <---------AHL20(2) ---------->DOF2   ttggctgtttcctccttctttcatccttatcacaagtctgaactaaaaaacctcaattgtaataaacaaattaaaaagcaaaaatataataaagagaaaa  14014700                                                                              <---------DAG2                                                                              <----------DOF2                                                                             <---------ANAC58                                     --------->ARR14(2)                 <----------DOF2                                     <---------ARR14(2)              --------->ANAC58              <---------ANAC58    <---------ANAC58                   --------->ANAC46              <---------ANAC58<---------ANAC58   <-------TEIL        --------->ANAC58             --------->ZAT2   <---------ANAC46--------->HSFB2a(1)  <---------ALFIN1            ------>ZmHOX2a(1) <---------ANAC58<---------HSFB2a(1) --------->MYB46(3)        <-----------GT1   <----------DOF2  ---------->DOF2      --------->ARR14(2) ------->MYB52(1) <---------ANAC58<---------ANAC46              <---------ARR14(2) ------MYB52(2)   <---------ANAC58<---------ANAC58         <----------ID1    <---------ANAC58    ----   caaacgtttttttcctgcttgcttctctctttgcttgcgttttctcaaaggttcgaagaaaacgaagaaccacgcttttgcttttttcccaagacttaat  14014800                                                                                        <---------WRKY12                                                                             <---------LBD16                                                                          <---------GLK1(1)                                                                         --------->ARR14(2)                                                                         <---------AGP1 <---------WRKY45                                                                         <---------ARR14(2)                                                                         --------->ARR11(3)      <---                                                                         <---------ARR11(3)      ----                                                                         <-----------ARR10       <---                                                                        <---------CCA1(2)       <----                                                                      --------->HSFB2a(2) <---------At4g35610                                                                      <---------HSFB2a(2) --------->At4g35610                                                                   <---------SPL7       <---------WRKY38(1)                                  --------------->AGL15           <---------ANAC58  <---------DEAR3(2)          <---------GLK1(1)       <---------------AGL15           <---------ANAC58  <---------MYB46(3)          --------->GLK1(1)      <-----------------AGL1           <---------ANAC46 --------->ETT(1)--         <---------ARR11(3)    <-----------GT1                    <---------RAP2.6(2) <-----------HVH21  --------->DAG2           <----------DOF2               --------->ARR14(2)========================== ---------->DOF2       <---------GLK1(2)                 <---------ARR14(2)------>ZmHOX2a(2) <------- ----->TOE2(3)    <----------DOF2<-----------GT1     <---------LBD16<------NtERF2<-----------HVH21<--   ctaaaaagcgagatttccttctttcgattcttttttctcaatctggttttcagtcttcggattcaatggcgtctggatcttcgggtcgggtcaactcagg  14014900                                                                                                    <                                                                   ===========================HOX2a_HOX2a                                                          ------->GAMYB                             -                                                        ------>MYB46(1)                             -                                                        -------->P ------>ZmHOX2a(1)             <---                                                       --------->MYB55(1)                 ===========                                                      <---------MYB55(2)                  ------>ZmHOX2a(1)                                                      --------->AtMYB61                  --------->TOE1(2)                                                      --------->DEAR3(1)                 --------->TOE2(2)                                ------>ZmHOX2a(1)     <---------MYB111(2)              <------ZmHOX2a(2)                            <---------ARR11(3)        <---------MYB46(2)              <---------ARR14(2) ------ARR14(2)             --------->ARR11(3)        <---------MYB111(1)             --------->ARR14(2) ----->ARR14(2)            --------->GLK1(1)          --------->MYB46(3)       <---------ALFIN1 ----- ------ARR11(3)            <---------GLK1(1)       --------->REM1(1)          ------>ZmHOX2a(1)<----- --ZmHOX2a(1)             <---------ARR11(3)      <---------ZAT14  ================================== ---->ZmHOX2a(2)          --------->ARR11(3) <---------YAB1        ================================== ==HOX2a_HOX2a           --------->YAB1    <---------ICU4--------->MYB46(3)   ================HOX2a_HOX2a --LBD16              <---------At4g35610  --------->YAB1<---------ATHB12     ======================= ----ZmHOX2a(2)     <------NtERF2         <---------YAB1------>MYB83          =======================   atccaaaggtttcgattttggctccgatgatatcctttgctcttatgatgactacaccaaccaagactcctctaatggtcctcactccgatcctgcgatc  14015000 ---------At4g35610 -------->ZAT2 -------->At4g35610                             --------------->AGL15 ------At4g35610                                <---------------AGL15 ==HOX2a_HOX2a                     <---------At5g28300      <---------ANAC46 ->ZmHOX2a(2)                      <-----------GT1         <-------TEIL -ZmHOX2a(2)             <---------ZAT14        <----------DOF2<---------MYB52(1)  <----------DOF2 =HOX2a_HOX2a           ------->GAMYB  <----------DOF2 <---------TOE2(3)     <---------DEAR3(1) ==HOX2a_HOX2a         --------->MYB46(3)      <-----------------AGL3        ------>ZmHOX2a(2) =HOX2a_HOX2a        <-----------GT1  <---------DAG2   --------->MYB59     --------->ARR14(2) ==HOX2a_HOX2a  <---------TOE2(3) <-----------GT1      <---------TOE1(3)   <---------ARR14(2)   gctgcttccaactccaacaaggttaaccacactgatttacccttttcttcctttttttaggttcgggtattttgctcgatcggcgatttttgtttgattt  14015100                                      --------->ANAC55(2)                                      <---------ANAC58                                      <---------ANAC55(1)                                      <---------ANAC46                                      <---------ANAC58                                     <-------TEIL                                    --------->CCA1(2)                                   --------->ARR14(2)      ----------->GT1                        <---------ANAC58               <---------LBD16               --------->ATHB12    <---------ARR14(2)  <---------HSFB2a(2)                 <---------At4g35610              <---------YAB1       --------->ARR11(1) <---------ANAC46               <---------ZAT6   --------->GLK1(2)    <---------ANAC58----------->GT1--------->HSFB2a(2)     ------>ZmHOX2a(1)   <---------ARR14(2)<---------TOE2(3)<---------ANAC55(2) <------ZmHOX2a(1)  <---------ZAT18   ttgggaatctagagttttgatttgtggtttgctcagagatacgtgtaaaaacaatttcgaggagtcaatatcgaactagtcctcttagtgttgagctaat  14015200  Previous    Next  AGI:  At4g28300.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT5G14540.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71577.1); contains InterPro domain Protein of unknown function DUF1421 (InterPro:IPR010820) Range:  from: 14014659    to: 14017074    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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