Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->MYB46(3)                                                                             <---------ARR14(2)                                                                             --------->ARR14(2)                                                                          <---------ANAC55(2)                                              --------->ANAC58          --------->MYB52(1)                                              --------->ANAC58          ------->TEIL                                       ------->GAMYB                ------>MYB83  <---------ALFIN1                                     ------>MYB83                   ------>MYB46(1)  --------->REM1(1)                  -------->P  <-----------GT1  --------->DEAR3(1) ------->TOE2(3)                     ------>MYB46(1)   <-----------HVH21--------->SPL7 ------->TOE1(3)                   <---------ALFIN1<------------MYB.PH3(1)--------->ANAC55(2)  ------ -->LBD16                      --------->At4g35610--------->RAP2.6(3) <---------SPL7--------->ANAC58 ->ANAC46                     --------->DEAR3(1) --------->MYB52(1)--------->MYB52(1)     ------>ZmHOX2a(1) ->ANAC58                   <---------At5g28300 ----------->HVH21 --------->AtMYB61 --------->ANAC58 ->ANAC58                  <-----------GT1   <---------TOE1(2)   --------->MYB46(3) --------->ANAC46 -LBD16                 --------->ARR14(2)   <---------TOE2(2)--------->MYB46(3)------->GAMYB------>ZmHOX2a(1)   accttcaccatttttgaagagaattggattcaccgctccaaccctcgcatgtaacggcttcacatccaccaacgtaccgtaaccacacgctcctcctaca  14001700                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                               ------                                                                                              -------                                                                                            <--------                                                                  <---------ANAC55(1)       <--------                                                                  <---------ANAC55(2)       ---------                                                                <---------ICU4             <---------DEAR3(1)                                                         ----------->GT1                 <-----------HVH21                                                         <---------MYB46(3)           <---------At5g28300                                                      --------->ALFIN1               <-----------GT1                                                  <---------ZAT14 <---------ANAC46--------->YAB1 <---     --------->At5g28300<---------ZAT6            --------->ZAT14 --------->ANAC55(2)<<<<<<<<<GT-2<--    ----------->GT1--------->TOE2(3)       <---------ZAT14     --------->ICU4     <---------ICU4 ----  <---------LBD16<---------TOE1(3)         --------->ZAT14<-------GAMYB          <---------YAB1<----- --->ANAC46      <---------TOE2(3) <------ZmHOX2a(1)<---------ANAC46           --------->YAB1--------   caattgcggtatataagttaatgttagtgtttaactaggaatcactagactgtgaagtgtggttaattatgtgttatagacttataattaccgtcgctgc  14001800      --------->ALFIN1                                    -------->ABF1     <---------MYB52(1)                                   <-------PIF5    <-------GAMYB                                         <-------MYC4    <-----------HVH21                                     ------->MYC2 --------->HVH21                                          ------->MYC4 -----NtERF2                                              ------->PIF5 ------->ATERF1(1)                                        <-------MYC2 ---------HVH21                                           ------->MYC3 --->NtERF2                                               <-------MYC3 ---------TGA1                                           >>>>>>>>>>ABI5 ------bZIP60(1)                                         >>>>>>>>>>AtMYC2 ----->bZIP60(1)          <---------At4g35610            >>>>>>>>>>HY5               <---------ANAC58 ----->RAP2.6(2)         ------->TEIL                    <---------ANAC55(2)         <---------bZIP60(2) >NtERF2       <---------ANAC58                          <---------TGA1a             <---------ANAC58 -->DEAR3(1)   --------->ANAC55(2)           --------->YAB1--------->ALFIN1       ----------->HVH21 -ATERF1(1)    <---------ANAC55(2)          <---------ATHB12 <------NtERF2      <---------ZAT2     -- -At4g35610<---------ANAC58           --------->ANAC58   <---------bZIP60(2)    <---------At4g35610<- >At4g35610<---------ANAC58       --------->LBD16        --------->TGA1a        --------->ZAT2------- ------ATERF1(2)<---------SPL7    <---------HSFB2a(2)    --------->O2           --------->At4g35610-- -------RAP2.6(3) --------->SPL7  --------->HSFB2a(2)    <---------O2 <---------ANAC58 --------->ANAC58 ----->ATERF1(2)--------->LBD16  <---------ANAC46        --------->ANAC55(2) ---------->DOF2 <------- ----ATERF1(1) <---------ANAC58 <---------LBD16     ----------->HVH21 <---------ANAC58 --------->ANAC58 ->ATERF1(1)  --------------->AtSPL3  --------->ANAC58   ===============================bZIP_DOF  ---   cgtcaccgttggggcttccgtaccatgtagctactgcgggaagccaatgagagtttgacacgtggcgatttgtcgtagccaaagctgacgagccaatgag  14001900                                                                                      --------->HSFB2a(2)                                                                                      --------->ETT(1)                                                                                      --------->ATERF1(2)                                                                                      <---------HSFB2a(2)                                                                                <---------ICU4                                                         <------NtERF2        --------->GLK1(2)      <------ZmHOX2a(1)                           <---------ANAC58       <---------ZAT2    --------->DAG2 ------->ZAT2                                     <---------ANAC58    --------->LBD16 <---------ANAC46 --------At4g35610                     --------->DAG2  <---------ANAC46  --------->At4g35610--------- -->YAB1    --------->ZAT14   --------->ATHB12<----------DOF2        --------->HSFB2a(2)  ---------->DOF2 ------->At4g35610           <---------YAB1 <-------TEIL--------->LBD16  --------->ZAT2--------->LBD16 --ATHB12   <---------ZAT14--------->YAB1--------->At4g35610        <---------LBD16  <---------LBD16 ------>GLK1(2)   --------->ALFIN1    ---------->DOF2 <---------LBD16<---------HSFB2a(2)<------NtERF2   aagctgcaggacaatgcagagtgtggctaacatgactggaaaaagctgcattttgtgccggagttgtttttcccgagcagaatcagtgccggaaaagtga  14002000            ------>NtERF2            ----------->RAV1(1)            <---------RAP2.6(3)           --------->ATERF1(2)           <---------ETT(1)           ----------->HVH21                                                                    -----           --------->ETT(2)                                                                     -----    --------->MYB52(2)                                     <-----------RAV1(1)           --------->DAG2  <---------MYB52(1)                       xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         ---------->DOF2 -->GT1    <---------ATERF1(2)     <XXXXXXXXXXXXXXXXXXXXMIR403             *TSS    --------->YAB1   -   ataagttagtttgccgacagtgagagagtgagagtgagtttatgtgtgaattgatatgtcaatgttgttgttgttatatagacaaaaataaaaggtagaa  14002100          <-----------RAV1(1)      <----------DOF2                                                           ----------->GT1 ---->ANAC58         <----------DOF2          <---------LBD16    <------------CBF--------->At5g28300 ---->ANAC58 <---------MYB46(3)  ---------->DOF2       ---------->ID1         <---------At5g28300 -------->MYB52(1)   <---------DAG2         <-----------GT1<----------DOF2   <-----------GT1       --   gcaaactgctttctgtggtttctctttttgttttctaaagttctatttgccggtttagtccctttgccattggtcttatttacggtgaaatgccactaga  14002200           ----------->RAV1(1)           ------------>AtMYB77          --------->MYB46(3)          --------->At1g77200          --------->DREB2C(2)          ------->GAMYB          --------->DEAR4(1)          --------->DEAR3(1)          ----------->HVH21         --------->DEAR3(2)         --------->MYB46(3)        ------>MYB46(1)        ------>MYB83        --------->MYB52(1)       --------->MYB55(1)       <---------ALFIN1                    <---------ANAC58      <---------MYB55(2)                   <---------ANAC58       ---------->DOF2      --------->MYB46(3)             <---------ARR14(2)        --------------->AGL15      <---------ABI4(2)            --------->ANAC58            <---------------AGL15               <-    <---------TCP15(1)             --------->ANAC58            <---------MYB59                    <--    --------->PCF2      <------NtERF2--------->ARR14(2)       <-----------------AGL1          -------   <------ZmHOX2a(1)  <---------DEAR3(1)   <---------ANAC46   ----------------->AGL1         <-------TEIL --------->MYB59      <---------ANAC46<------ZmHOX2a(2)     <---------PCF2          <---------AHL20(2) ------->ICU4  <-------GAMYB      <---------TOE1(2) <-----------HVH21      <----------DOF2  ---------   aattaggacccaccgacagttaaggcgtcgatttcgcacgatccagcgtgtcattgtcagagggacctaaaagggtactttagtaatttatgagattcga  14002300                    <-----------RAV1(1)                            --------->AHL20(2)                 --------->GLK1(2)                  ----------->RAV1(2)                <---------GLK1(2)                   <---------ANAC55(2)                --------->ARR14(2)        <---------MYB52(1)       <---------AHL20(2)              ----------->ARR10      --------->ARR14(2)          <----------DOF2          <---------HSFB2a(2)        --------->GLK1(2)           ------>ZmHOX2a(1) ------GAMYB--------->LBD16          <---------ARR14(2)         --------->TOE2(3)               <---- -------MYB46(3)<---------ARR14(2)  --------->GLK1(1) ----------->HVH21                         ----- ---->HVH21--------->ANAC46         <---------GLK1(1)<---------MYB59                 <-----------GT1 >CCA1(2) <---------LBD16          <------ZmHOX2a(1)--------->ANAC55(2)     <---------MYB52(1) <-----   ccgttgaaatttcccgcagattctgtggtagagaagaggaatccgttaagagatacctgactcaatcctttaatttctgttttttttttccgatacagat  14002400    --------->ANAC58    --------->ANAC58                  --------->MYB52(2)                        ------->TEIL    --------->ANAC46   <---------AHL20(2)                              <----------DOF2 -----GLK1(1)          --------->ATHB12                      <----------ID1   <-------TEIL ---->GLK1(1)         <---------AHL20(2)                --------->CCA1(2)--------->AHL20(2) ----GLK1(2)          --------->AHL20(2)         <---------YAB1        --------->TOE2(3)  <----------   ttcttcacgatatatgttttttcatttattgatatcaagttagtttgttttcttatagataagagaacaaatactttaaatgcatttcaatataactgtt  14002500                                                       --------->ANAC55(2)                                                       --------->ANAC46                                                       --------->ANAC58                                                       --------->ANAC58                                                       <---------ANAC46                <---------ZAT18                                                       <---------ANAC55(2)        <---------ANAC58                                                <---------GLK1(1)                 <---------ANAC58                                               <---------ARR14(2)  --------->TOE2(3)   --------->ZAT14                                               --------->ARR14(2)<---------ARR11(3)    <---------ZAT14                                          <---------ANAC46       --------->ARR11(3)    --------->ZAT18                              <---------YAB1--------->ALFIN1 --------->ANAC58     <---------ANAC46 --       --------->ZAT6 --------->ZAT14     --------->ALFIN1   --------->ANAC46 ------>MYB46(1)-------- -GT1 <---------YAB1  <---------ZAT14    <------ZmHOX2a(1)   --------->ANAC58 ------>MYB83   --------   tgtatgttatcagtatgtatagagtatagtctatgaatagagaggagtggatatgttacgcaaacgaaatcttagtgaccaatctcgtgtgcacaacgca  14002600  Previous    Next  AGI:  At4g28250.1    Description:  ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3). Identical to Expansin-B3 precursor (EXPB3) [Arabidopsis Thaliana] (GB:Q9M0I2); similar to ATEXPB1 (ARABIDOPSIS THALIANA EXPANSIN B1) [Arabidopsis thaliana] (TAIR:AT2G20750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23954.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Major pollen allergen Lol pI; (InterPro:IPR005795); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Pollen allergen/expansin, C-terminal (InterPro:IP Range:  from: 14000044    to: 14002075    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version