Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------GLK1(2)     <---------ARR14(2)     --------->ARR14(2)   --------->LBD16  <---------------AGL15  --------->HSFB2a(2)  <---------HSFB2a(2)  --------------->AGL15                                                                  <-------GAMYB <-----------------AGL3                      --------->ATHB12                           --------->LBD16 ----------------->AG                      <---------ARR11(3)                         <---------LBD16 <-----------------AGL2            <---------YAB1                                  <---------WRKY18(1) ----------------->AGL3          --------->YAB1                            <---------TOE1(2) ----------------->AGL2          <---------ICU4                           <---------ANAC58 <-----------------AGL1          -------->HAHB4                --------->YAB1     ----------->HVH21 <-----------------AG           <---------ATHB51     --------->GLK1(2)    <---------ANAC46 ----------------->AGL1         --------->ICU4      <---------GLK1(2)     <---------ANAC58   ttttccagatttggcatttgtctgaaactggctaattatgagcaaaatcatttggaatctgtgaatcaaaatagtcgcttgttcttgacccggttgaatt  13992600                 <---------------------WRI1               <---------WOX13(1)        --------->At4g35610             --------->ATHB12            <---------ZAT2            ------>ZmHOX2a(2)        <------ZmHOX2a(1)                           <---------ZAT18    <            ================================HOX2a_HOX2a           --------->ALFIN1   <----------DOF2<   cgatgtgaattggatcgattgctaaacaaacaaaaacgaggacagcttgaatttgtgggattaatagagtgttgccattcttgtgggctttggaccttgg  13992700                                                                           <-------MYC3                                                                           ------->MYC3                                                                           ------->MYC2                                                                           <-------MYC2                                                                     --------->ARR14(2)                                                                    --------->GLK1(1)     --------->YAB1                                                               <---------bZIP60(1)       <---------YAB1                                                               --------->ETT(2)          <---------AHL20(2)        <---------WOX13(1)                                     <---------ETT(2)         --------->AHL20(1)   <---------At4g35610                                         --------->bZIP60(1)      <---------AHL20(1)   --------->At4g35610         ------>MYB83                 ----------->HVH21     --------->TOE2(3) --------->ZAT18               ------>MYB46(1)            <---------At4g35610  ----------->RAV1(1) ---------ANAC58             <---------MYB59----------->RAV1(1)<---------TGA2(1) --------->REM1(1)<-- ---------ANAC58 ----------->HVH21    <-----------RAV1(1)------->TEIL<---------ARR14(2) --------->AHL20(2)   atgtgtgctgatttataaactgacccttctaccaaattttgtgttgcgacataaacttgaatctgacgacatatccatgtgcaacatcaatataatagtt  13992800                   <---------ANAC58                  <---------MYB46(3)                <---------WOX13(1)                           --------->MYB52(1)              --------->ATHB12                             <---------MYB111(1)              --------->ATHB51                             <---------MYB59           --------->ANAC55(1)                             <---------MYB52(2)           --------->ANAC46                                <<<<<<<<<<AtMYB44           --------->YAB1                                <-----------GT1    <-----------GT1<---------ANAC58                   ----------->GT1   <---------AHL20(2)                      --------->ANAC58<------------MYB.PH3(2)   --------->AHL20(2)                      --------->ANAC58<---------MYB46(2)        ------->TEIL  --------->AHL20(2)        --------->GLK1(1)         --------->YAB1     <---------ATHB12         --- -------YAB1 <---------YAB1 <---------GLK1(1)    <---------ATHB12   <---------At4g35610       -------   cttatttaatcacacataattggttgcacgatttccgaatggcacaagctaatcaattgtaactaacttaagctaatcaattgtatgtaacttgaataat  13992900                                 --------->ANAC58                                 --------->bZIP60(2)                            --------->ARR14(2)                            <---------ARR14(2)                              ---------->DOF2               --------->DAG2    --------->ANAC46                        <---------ZAT6      ----------->GT1      <---------CCA1(2)                           ----------->GT1 ------>WOX13(1)       <----------DOF2--------->At4g35610         --------->AHL20(2) -->YAB1      ---------->DOF2    --------->ANAC58                 <---------AHL20(2)    ---------->DOF2   caatcgaccagataaaaaaaggagactttgtatccacgacatctggattatggagacactaagcgtttttaattagtgaaaagtcgctactaaagctcag  13993000                             ------>ZmHOX2a(2)                            --------->GLK1(1)                                                      <-                            <---------GLK1(1)                                                  ======                           <---------AGP1                                                      ------                           --------->ARR11(3)                                                --------                 <---------ARR14(2)       ---------->ID1                                  <----------DOF2                 --------->ARR14(2)   <----------DOF2                          <---------ICU4<-------           <---------WRKY12<---------ARR11(3)                            <-----------GT1 <---------ANAC58   *TSS  <-----------HVH21<---------CCA1(2)                          <----------DOF2     <---------ANAC58   tacttgaactcggtcagaggtttctcttggatctcttcaactttgtcttctcagaatcaaacctctgaagacttttcaccaaaatgacattactttcctc  13993100                                                  <---------ZAT18                                                  <------NtERF2                                                --------->ANAC46                   --------->At4g35610         ------>ZmHOX2a(1)                 =====================================HOX2a_HOX2a                 ===============================HOX2a_HOX2a            <----------DOF2    ----------->ARR10  <---------ALFIN1     ------>ZmHOX2a(1)        <---------ANAC58 --------LBD16   ------>ZmHOX2a(2)         <---------ALFIN1          <---------ANAC58 =======================HOX2a_HOX2a      ------>ZmHOX2a(1)<---------TOE1(2)                        -- >ZmHOX2a(1)     ==================================HOX2a_HOX2a  --------->ATHB12               <----- --------->AGL1<---------ARR14(2)       <---------ALFIN1  <---------TOE2(2)            <-----------HVH21 ----------AGL1--------->ARR14(2)   <---------At4g35610  <-----------RAV1(2)        <----------DOF2<-   tctcggaagagcctctcgatctgctccacttgcctctaagctcctcctcctcggcactctcaggtttcattgcctttcaatgttcactttgtcatcgctt  13993200                                                       --------->GLK1(2)                                                       --------->ARR14(2)                                                       <---------ARR14(2)                         ---                                                       ------->TEIL    <---------RAP2.6(3)       ----                                                       <---------ARR11(1) <----------DOF2        ----                                                      <---------ARR14(1)<------NtERF2 <---------AHL20(1)                                                      <---------CCA1(2)------>NtERF2  --------->AHL20(1)        <------NtERF2                              --------->HSFB2a(2)--------->DEAR3(1)     ------>ZmHOX2a(1) ---------->DOF2                                ------->TEIL          --------->RAP2.6(2)   <-------- ------->HSFB2a(2)                     --------->ARR14(2)            ---------->ID1   <---------ARR11(3) -----DOF2   <----------DOF2           <---------ARR14(2)            <---------RAP2.6(2) <-----------GT1 --------HSFB2a(2)            <----------DOF2  <---------CCA1(2)<----------DOF2 --------->TOE2(3)<---   tccaaaagtcgggacctttcttagatgttttccttttctcaaatccgatgtatctcgaatctttgacttttgccgcctttaatctcaatattttcctaac  13993300    <---------ZAT14                         --------->ARR11(3)    --------->ZAT14               <----------DOF2  --------->ZAT6               <---------ARR11(1)     <---------MYB46(3) ------>DOF5.7(2)              <---------ARR11(3)    <---------ANAC46 ----->TOE2(3)                 ------->TEIL <---------ARR11(3) ----->TOE1(3)       <---------ANAC58 --------->At4g35610 -MYB59              <---------ANAC58 <---------At4g35610        --------->AHL20(2)    --------->ATHB12 -------DOF2  <---------YAB1  <---------CCA1(2)    <-----------RAV1(1)           --------->GLK1(1)   tttaactgtagtatttctgattagcttgttctgtatctttagctaagttcttgttgtgggtgaacaaaaaaatcacatttgggaattgctcattgagagt  13993400                                          <---------ANAC58                                          <---------ANAC58                      <------ZmHOX2a(1)                                   --------->ZAT14                       ---------->DOF2                                   <---------ZAT14                  --------->MYB52(1)                            --------->ALFIN1                     --------->At4g35610                          <---------MYB46(3)            --------->MYB52(1)    --------->ALFIN1                         <---------DEAR3(1)     <---------------------WRI1    -----------------------                        --------->At4g35610  --------->SPL7 <---------------------WRI1         ------                        <---------At4g35610<---------SPL7<---------TOE2(3)--------->DAG2    >>>>>>>>>TBF1   gtgtttgtgtattcttacacatttgcagcggtggaagtatagtggcatacgctgatgctaacgaagaagctaacaaaaaggaggagcataagaagaagaa  13993500  Previous    Next  AGI:  At4g28220.1    Description:  NDB1 (NAD(P)H DEHYDROGENASE B1); NADH dehydrogenase/ disulfide oxidoreductase. similar to NDB3, NADH dehydrogenase [Arabidopsis thaliana] (TAIR:AT4G21490.1); similar to NDB4 (NAD(P)H DEHYDROGENASE B4), NADH dehydrogenase [Arabidopsis thaliana] (TAIR:AT2G20800.1); similar to NDB2 (NAD(P)H DEHYDROGENASE B2), disulfide oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G05020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41235.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59739.1); similar to external rotenone-insensitive NADPH dehydrogenase [Solanum tuberosum] (GB:CAB52797.1); contains InterPro domain FAD-dependent py Range:  from: 13993003    to: 13995837    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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