Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->ANAC58                        --------->O2<---------AHL20(2)                        <---------ANAC46<---------AHL20(2)                        --------->ANAC58--------->AHL20(2)                        --------->ANAC55(2)                        <---------ANAC55(2)                        --------->ANAC55(1)                    <-----------HVH21 <---------YAB1                 <---------MYB52(1) --------->YAB1                ------>NtERF2       <--------HAHB4           --------->KAN4(2)        <---------ICU4          --------->KAN4(1)         --------->ATHB51          <----------TaMYB80        -------->HAHB4          <---------KAN4(1)         -------->ATHB1         --------->ATHB12         <---------KAN4(2)         <---------ATHB51      <---------WOX13(1)         --------->ARR14(2)        <---------YAB1 --------->YAB1              --------->ANAC58         <---------ARR14(2)        --------->ICU4<---------YAB1               --------->ANAC58    <--         ---------->TaMYB80   ----------->GT1--------->TOE2(3)------>ZmHOX2a(2)     ----------->GT1 -   gacaactgtagaatatgccgctagtcacgtaaatgtaattattaaaacattatcaaaagattgatcggagaagaaaactcaagaaatggtcaaatatgtt  13979900                                                                         ------>NtERF2                                                                        --------->WRKY12                                                                        ----------->HVH21                                                             <------NtERF2          ---------->DOF2                                    --------->ATERF1(1)   ------>MYB46(1)                                          <---------RAP2.6(3)   ------>MYB83              ---------->DOF2                <-----------HVH21 <---------MYB59         ----------->GT1                   --------->DEAR3(1)   <<<<<<<<<TBF1 ---------GT1    ---------->DOF2                    --------->ALFIN1  <---------At4g35610           - ---------------->AGL1 ---------->DOF2          ---------->DOF2 <---------CCA1(2)                 <--   ttaccaacttcgtaaagaataaagagaaagtaaaagaaatcaaactctttcaaagtggaagccgtcgtctctcgctgacttcttcttcatcggtttttct  13980000                                                                                 --------->DAG2            --------->ANAC58                                               ---------->DOF2            --------->ANAC58                                              <---------AHL20(2) <---------ANAC58                                                      --------->YAB1 <---------ANAC55(1)                                              --------->AHL20(2) <---------ANAC46                  <---------LBD16                <---------AHL20(2) <---------ANAC58                  <---------At5g28300       <------ZmHOX2a(1)  ---------->DOF2 -------->MYB52(2)                --------->MYB52(1)     --------->TOE1(2)--------->AHL20(2)     ---- -------MYB52(1)                  <-----------GT1     ---------->DOF2 <---------AHL20(2)     <-------   gttacttgtatgtgaagccaaataaacctgcagaattcacggtttgaatatgagaagaaagtaggattttaaataataaaagaaaagtgagagagaagac  13980100                                                                                           ------>NtERF2                                                                                          --------->DEAR3(1)                                                                                          --------->DREB2C(2)                                                                                   --------->ATHB51                                                                                   <------------ATHB5                                                                                   <---------ICU4                                                                                   <--------ATHB1                                                                                  <---------ATHB12                                   <-----------GT1                                <---------ATHB51                                <---------ICU4                               --------->ANAC58                             --------->TOE2(3)                               --------->ANAC58                             ------->GAMYB                                   --------->AtLEC2                            --------->MYB46(3)    --------->ALFIN1        <---------YAB1  --------->ANAC46 --------->ARR11(3)        --------->ANAC58       <-----------RAV1(1)   <---------ICU4   --------->MYB46(3) <---------ARR11(3)        --------->ANAC58      ------->MYC3           --------->YAB1  <---------At5g28300 ------>DOF2           --------->YAB1  <---------ICU4              <---------WOX13(1)  <-----------GT1 ---ID1       ---------->DOF2--------->YAB1      <-------MYC3   <---------YAB1    --------->ICU4   aaagacctcgttgcacaaaagcccatcacaaccaaaattactaattagacatgtgtggcaaatgttatgactgatcatcatgcaataattcaccgccaat  13980200                                                                              --------->ATHB51                                                                              <---------ICU4                                                                              <--------HAHB4                                                                             --------->ICU4                                                                             <---------ATHB12                                                                           --------->ANAC46                                                                           <---------------AGL15                                                                          ----------------->AGL3                                                                          <-----------------AGL3                                                                          ===========================                                                                        ------->TEIL                                                                    <---------------AtSPL8        ---                                            --------->DAG2          --------------->AtSPL8        ---                                           ---------->DOF2   <-------TEIL ----------------->AGL2<----                <----------DOF2     ----------->GT1 <XXXXXXXXXXXXXXXXXXXXMIR827         <-----------GT1         -------->P              <----------DOF2  <----------DOF2   <---------TOE2(3)<----------DOF2-   accatagatgctaccagactttgtaggctctctctctttagtaaataaagcactttgtttatgttcgtttaatgtacccataattagctttaactatttc  13980300         --------->AHL20(2)         <---------AHL20(1)                                                             <<<<<<<<<<<<<         <---------ARR11(3)                                  <---------ARR11(3)    --------->MYB52(1)         --------->AHL20(1)                                  --------->ARR11(3)  --------->MYB46(3)        ----------->TBP                            <---------ALFIN1              <---------MYB52(2)    --------------->AGL15                        --------->AtMYB61           ------>ZmHOX2a(1) ===================MADS_MADS                   --------->MYB46(3)          --------->TOE1(3) ------>ZAT6                                  --------->ANAC58              --------->ANAC46    <---- ------>ANAC46        *TSS                    --------->ANAC46       <----------DOF2 --------->ZAT6 -------GT1        --------->ANAC46           --------->ANAC58      <---------DAG2------->GAMYB <---- -------->ZAT14  --------->ANAC46      --------->ANAC46  ---------->DOF2    --------->TOE2(3)   <----   actctactctatatattacacacactatctcttccatcttccctccacaaaccacacattcaagctcttaccttttatcctcaactaacacaacaatggc  13980400                                                                            <---------ANAC58                                                                            <---------ANAC58                                     --------->ANAC58                 --------->LBD16           --------->GLK1(2)         --------->ANAC58                --------->ANAC46           <---------ARR11(3)      <--------P                       <---------LBD16 <<<<LFY   --------->ARR14(2)   --------->HSFB2a(2)                --------->MYB52(1) -----ANAC58         ----------->RAV1(1)    <---------YAB1        <---------ARR14(2)            <---- -----ANAC58         --------->RAP2.6(2)   <---------GLK1(2)      --------->MYB52(1)         -------- -----ANAC46  ----------->HVH21 <---------HSFB2a(2)          <------ZmHOX2a(1)            --------->ARR14(2)   ttatactctgcaaaatctgacagccacaattgttctggtaagcctgattcttggatgtacagaggaagtaaccggaatgcgttacattcccatttccccc  13980500                                                                                <---------ANAC58                                                                               <-------TEIL                                                                              --------->ARR11(3)                                                                            <---------HSFC1(2)                                                                            <---------HSFB2a(1)                                                                            --------->HSFB2a(1)                                                                            --------->HSFC1(2)                                                                            <------MYB46(1)                                                                            <------MYB83                                                                       --------->HSFB2a(2)       ----                                                                 --------->LBD16<---------ANAC58-----                                                                 <---------------AGL15          -----                                                                 ------>ZmHOX2a(1)              -----                                                                =====================================                             ------>ZmHOX2a(1)                  <-----------------AGL1        <------                           <---------ANAC46      ------->GAMYB  <-----------------AG        <-------- -----ALFIN1            <----------DOF2         --------->MYB46(3)     <---------HSFB2a(2)------>MYB83 ->ANAC46     <---------ATHB12           ------>NtERF2          <-----------------AGL2    ------>MYB46(1)   actcccagtgagagcaaacattcagactttcctgtaaacatggtgcctcaaccatctagtctcattcctggttttggaaggttcttgctacctcccacac  13980600                                   <---------At4g35610    ------>NtERF2         ------>ZmHOX2a(2) --------->ZAT2          <------ZmHOX2a(2)                                      --------->DEAR3(1) <---------ZAT2         <---------ARR11(3)                                    <------NtERF2 <---------At4g35610    <---------ARR14(2)       --------------->AGL15        --------->LBD16 --------->At4g35610    --------->ARR14(2) --------->ANAC46                  --------->ANAC58 ----->AtMYB61          --------->ARR11(3) --------->ANAC58                  --------->ANAC46 ---->ANAC46            --------->ARR14(3)<---------ALFIN1          --------->YAB1        <---------- ---->ANAC58        ---------->DOF2<-------GAMYB<-----------------AGL3 ---------->DOF2    <---------LBD16 ---->ANAC58    ================HOX2a_HOX2a--------->ANAC58<---------GLK1(1) --------->ANAC58 =================================================================MADS_MADS <---------LBD16  <------ZmHOX2a(1) ---ALFIN1      ------>ZmHOX2a(1) <-----------RAV1(1)      --------->GLK1(1)--------->ZAT18 --------- -ALFIN1        =================HOX2a_HOX2a  <---------ALFIN1  ------>ZmHOX2a(1)<---------SPL7   ctaagctgccattccttccttacaaagatccccttgctgttgccccagccacttcaaatggaactcctagtaataaagcccgcagtccgagttcaggaga  13980700                                    --------->MYB46(3)                                 <---------ETT(2)                               <-----------HVH21                            <---------bZIP60(2)                            <---------ANAC58                            <---------ANAC58                          <---------WRKY18(1)                                               <--------     <---------ARR14(2)  ----------->HVH21                                                  ---------     --------->ARR14(2)--------->YAB1                                                       --------- -RAV1(2)              <---------ICU4                   <-------TEIL              --------->ANAC55(2) >LBD16            --------->MYB46(3)        <----------DOF2                      --------->ANAC46  <   agatgaagttccaccagtgccacaaccatgacctgtcaacaaataagcttttgctagatgcagaagggtattcaattctggttcacataacaagtatact  13980800  Previous    Next  AGI:  At4g28160.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to cell wall protein precursor, putative [Arabidopsis thaliana] (TAIR:AT2G20870.1); similar to putative cell-wall P4 protein [Brassica napus] (GB:AAF29528.1); similar to putative cell-wall P8 protein [Brassica napus] (GB:AAF29529.1) Range:  from: 13980322    to: 13981007    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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