Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->TOE2(3)                                       <---------MYB59                                       --------->TOE2(2)                                       --------->TOE1(2)                                      --------->ANAC55(2)                                 <---------ICU4                                 <--------HAHB4                                 --------->YAB1                                <---------YAB1                                --------->ICU4                               --------->ARR11(3)                               <---------ARR11(3)                              -------->HAHB4             --------->YAB1   <---------ICU4            <---------YAB1    --------->YAB1      <---------ANAC46       --------->ICU4  <---------ANAC58           <---------YAB1                             <---------ARR14(2)  <---------ANAC58         --------->YAB1                               --------->ARR14(2) ---------YAB1             <---------ICU4                               <---------ARR11(3) ----->ARR11(3)           --------->ICU4                                --------->ARR11(3)    <------ZmHOX2a(1) ------ARR14(2)        <------NtERF2  <---------ANAC55(2)               --------->GLK1(2)   --------- ----->ARR14(2)        <---------At4g35610                         ----------->GT1          --------- ------ARR11(3)        --------->At4g35610        --------->YAB1 ----------->GT1 <---------ZAT14   atatgcttgtgtttatgaaaatggcagcataatgatcattacctaagagtattgataacagaatgagaggtgaaaatctggattgcagagaggtaaggaa  13978600                                                             <---------ZAT18                                                             --------->ZAT14                                                             <---------ZAT14                                                           --------->ANAC46                                                           --------->ANAC58                                                       --------->ANAC58                                                       --------->ANAC58                                                      --------->SPL7                                                     <---------MYB52(1)                        ------                                                    <---------SPL7                             ------                                                <---------ALFIN1                              -------                                               <---------ABI4(2)                             ------>MYB46(1)                                               <---------ZAT14<---------ALFIN1               --------                         <---------ARR14(2) <---------At4g35610                              ------>MYB83                         --------->ARR14(2) ----------->RAV1(2)                             <-------- >ANAC58             <---------TOE1(2)      --------->At4g35610                      <---------ARR11(3) >ANAC58     <---------ATHB12             <---------ALFIN1 --------->ANAC58          --------->ARR11(3)   catagtattggaccaatgtttcgcccgtttccgatacaatggggacacctgcaccgtaagcactccactcgtcgaaacaatcccaaaaatctcccaacct  13978700                                                                                        ------>ZmHOX2a(1)                                                                                       --------->TOE2(3)                                                                                      ------>ZmHOX2a(2)                                                      ------>ZmHOX2a(2)              <------ZmHOX2a(2)                                                    <---------ARR11(3)              <---------ARR11(3)                                           <---------TOE2(3)                        --------->ARR14(2)                                      <------ZmHOX2a(1)                             --------->AGP1 --->TOE1(3)                          =======================HOX2a_HOX2a            <---------ARR14(2) --->TOE2(3)                --------->GLK1(1)       <---------AGP1                  <---------GLK1(2) ---->RAV1(2)              <---------ARR14(2)  <-------TEIL                         --------->ARR11(3) >P  --------->ANAC46      --------->ARR14(2) --------->ARR11(3)         --------->ANAC46 -ALFIN1              --------->MYB52(1)   <---------TOE1(3)       ---------->DOF2 <---------At4g35610   gaaatactcgacgctctggctctccaacggataccatagaggattaaggttcttgatctgtgtctgccaaaaaacacacagtttcagatcctaaattcag  13978800                        <---------ANAC46                               <---------ANAC46                        <---------ANAC58                              <---------At4g35610                        <---------ANAC58                              --------->At4g35610                     --------->DAG2                                --------->ZAT18                    --------->DAG2                              <---------ANAC46                    <                   ---------->DOF2                            --------->ZAT14 --------->GLK1(2)  <---               <----------ID1                                 <---------ZAT14<---------GLK1(2) <-----             ---------->DOF2                      --------->ANAC58 <---------ZAT14         ----------         <---------TOE2(3)                        --------->ANAC58 --------->ZAT14 --------->WRKY18(1)   agaattgttttaagaaaaagaaaaaggcgtaaacctttgggagggaataggcaggcacaatcggtgtagtgcagcgtaagaatcggtctaggttagattc  13978900                                                                                                 <---                                                                                                 <---                                                                                        =============                                                                                        <----------DOF2                                                                                  --------->ARR14(2)                                                                                  <---------GLK1(2)                                                                                  <---------ARR14(2)              <---------YAB1                                                   --------->LBD16   ====            <---------ICU4                                                    <---------ANAC46   <---            <--------HAHB4                                                    --------->ANAC55(2)====            --------->YAB1                                                    <---------ANAC55(2)<---  <<<<<<<<<WRKY18               ------>MYB46(1)                               <---------ANAC58   <--- -----------HVH21      ---------->DOF2                                        <---------ANAC58------- ------At5g28300    ----------->RAV1(1)    --------->LBD16                    <---------LBD16 ------- --TEIL    <---------YAB1       ------>MYB83                      <------ZmHOX2a(1)--------->GLK1(2) ->ARR10   --------->ICU4     <---------MYB59           ---------->DOF2      <---------LBD16---------   actgtcaaaaaccatcattatccaacaaagaaccaaacttcgacccagaaaaaaaaaaaaaagagagaggagagagtattgcgggattctctttccctga  13979000       <---------ARR11(3)       --------->ARR11(3)   ---------->DOF2 ------bZIP60(2) ------TGA1a ======bZIP_DOF                                                       <-----------HVH21           --- =============bZIP_DOF                                           ------------>CBF                 <-- ------ANAC58                                                  --------->ANAC58                  ---- =============================================bZIP_DOF         --------->ANAC58                 ----- ------O2                                                      --------->ANAC46              -------- ------ANAC58                      <---------DAG2             <---------LBD16                -------- ---->HVH21                        <----------DOF2            <---------At5g28300      <------------CBF ---->TGA1                  <---------ZAT6                 <-----------HVH21          --------->ATHB12 -->RAV1(2) *TSS        ---------->DOF2                   <----------DOF2            --------->ICU4 <   cgtttcaaagagcttagttttcggacaaaagtgttagctttattagacgagcatttgagactttcacggcaatgtcagaaacagggaaagattgaacgaa  13979100        --------------->AGL15        <---------------AGL15 ------>DAG2                   --------->GLK1(1) -------------AtSPL8           <---------GLK1(1) ----->DAG2                --------->ANAC46                  --------->ANAC58          ---------->DOF2 ----->DOF2                --------->ANAC58                  ----------->GT1      <---------TOE2(3)<- ->ANAC58                  --------->ANAC58                  --------->ANAC58 <----------DOF2    <--- ->ANAC58    ---------->DOF2------->GAMYB        ----------->GT1        ------->TEIL --------->CCA1(2) ----------ID1           --------->MYB52(1)     --------->YAB1         <---------CCA1(2)   ----------   aagggacaaactttttaaagaaaactccaacggaactctgttttgagcaatgagaaaaaaaacaagtaaaattgtatctactttgagataaaagaaagta  13979200                       ------>MYB46(1)                             <---------ARR14(2)                       ------>MYB83                                --------->ARR14(2)                     ------->GAMYB                        --------->ATHB12                     <---------MYB59                     <---------YAB1 ----------->RAV1(2)                     --------->AtMYB61                   --------->ICU4 <---------At4g35610     ----------->GT1--------->MYB46(3)               <------ZmHOX2a(1)<-----------GT1 -----ZmHOX2a(1)   -------->P                       <---------At4g35610 --------->At4g35610 ------TOE2(3)    --------->WOX13(1)              <-----------RAV1(2)<-------TEIL               <---- >DOF2       <---------AHL20(2)                <---------TOE2(3)<--------P    <----------DOF2<-------   aggaaataggtttatataatcaaccaaactccatgagacccattcttctaaggcaggagattattggtagattcacctgtctttctcacaactctccacc  13979300                      <---------AHL20(2)                      --------->AHL20(2)                     --------->AHL20(2)                 <---------YAB1       <---------ANAC58      <---------AHL20(2)              <---------ANAC58   <---------At4g35610      --------->AHL20(2)  <---------AHL20(1)             <-------GAMYB     --------->AHL20(2)   <---------AHL20(2)           --------->ETT(1) -----DAG2 <---------YAB1 --------->AHL20(1)         <-----------HVH21                 <---------ANAC46 --ALFIN1 <-----------GT1 --------->AHL20(2)      <----------DOF2                      ----------->GT1   ttctccatttattttcattttcatttaataaaatatagtttcgtttctctaactttgtcggatgagattgagttttgtttgtttgggtttagtataaaac  13979400             --------->ARR14(2)             --------->ARR11(3)             <---------ARR11(3)        ----------->RAV1(1)            --------->RVE1(1)   <---------ANAC58                  ------>ZmHOX2a(1)            --------->CCA1(1)   <---------ANAC46           <---------YAB1                       -----    <---------ANAC58            <---------ANAC58 --------->MYB52(1)                  <---------At4g35610    <---------ANAC58     <---------AtLEC2   ----------->RAV1(1)  --------->TOE2(3)   --------->At4g35610   gttatggcttcttaatatcttcattttgcatagttcgtgaacaacacaacaaaacagagctattattcctaagtcttagatgatgacatctcccaataca  13979500  Previous    Next  AGI:  At4g28150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G03420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24103.1); contains InterPro domain Protein of unknown function DUF789 (InterPro:IPR008507) Range:  from: 13977309    to: 13979012    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version