Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------------->AGL15                                                               <---------------AGL15                                                               <---------YAB1                                                  --------------->AGL15                                                  <---------------AGL15                                                 ----------------->AGL1                                                 <-----------------AGL1                                                 <-----------------AGL2          <---------------------WRI1             <-----------------AGL3         ------->GAMYB                           ==============================MADS_MADS      --------->MYB52(1)                         ----------------->AGL2      ----------->RAV1(1)                        <-----------------AG             <------ZmHOX2a(1)     --------->YAB1                      --------->TOE2(3) <---------ARR14(2)    ----------->GT1 <---    --------->MYB46(3)                --------->GLK1(1)    --------->ARR14(2)  <---------At4g35610    <---------ATHB12        <---------YAB1       ----------------->AG<---------HSFB2a(2)       <-----  --------->WOX13(1) ---------->DOF2  <---------GLK1(1)    <---------GLK1(2)   --------->At4g35610  <   aacccaatcaacagagaagaaatcaaagtcacaattggagaaatctcaattacccaaaatggattctgattttagaagttcagaggaaaaacagagactt  13937100                                                                         <----------DOF2     ----------->GT1                                                     <---------DAG2   <---------ANAC58                                                   --------->ANAC58   <---------ANAC46                           <---------ICU4 --------->ZAT6   <---------ANAC58                --------->ANAC58         <---------ZAT14  <------NtERF2                    --------->ANAC58         --------->ZAT14 ------AtMYB61                  <------ZmHOX2a(2)         --------->At4g35610 -----DOF2       --------->YAB1--------->ARR11(3)         <---------At4g35610      --------->LBD16 ---------DEAR3(1)             <---------ARR11(3)<-----------GT1      --------->ANAC58   tggtggcgagtaacaacaaaaatcacaaacccagatcacgaattacaaaaattacgaggcagaacactacatacgcttttcattccgaaaattcaaaact  13937200                                                                                                    >                        --------->At5g28300                                              <<<<<<<<<<<<                       ----------->GT1                                                   ------>MYB46(1)                   <---------ZAT14                                                    <---------HSFB2a(1)              <---------ZAT14                                --------->ANAC46         --------->HSFB2a(1)  --------->YAB1   --------->ZAT14                ---------->DOF2       <------ZmHOX2a(1)------>MYB83   tcaaccagaataagagaacagagaactgtaatttgaaaaacagagtttcagagaaagacttacacgagagaagaggaaggaatagcaaaccttccattgg  13937300                                                          --------->bZIP60(2)                                                          <---------bZIP60(1)                                                          --------->ANAC58                                                          --------->bZIP60(1)                                                          <---------TGA2(1)                                             <----------CDC5                                             <------NtERF2--------->ANAC58                                             =======================MYC_MYB                                            ------>NtERF2 --------->ANAC46                                            <---------At4g35610                                            --------->At4g35610                                           <---------DEAR3(1)                                           <---------ANAC46                                          --------->ATERF1(1)                                          --------->RAP2.3(1)                                          <------NtERF2   <---------TGA1a                                         <---------RAP2.6(1)                                         ------>NtERF2    --------->TGA1a                                         <---------ORA47(2)                                         <---------DEAR4(2)                                         <---------RAP2.3(1)                                         <---------ERF1   --------->TGA2(1)                                         <---------ATERF1(1)                                         <---------RRTF1(1)                                        <---------DEAR3(1)<---------ANAC55(2)                                        <---------RAP2.6(2)     <---------ALFIN1                                        <---------ATERF1(2)    --------->MYB46(3)                                        <---------RAP2.3(2) --------->TGA2(2)                                        <---------DREB2C(2)<-----------TGA1                         <--------P--------->ARR14(2)    <-----------STF1                 --------->ANAC46                         ===========================================MYC_MYB          --------->ARR14(2)                      --------->LBD16   <---------RRTF1(2)<---------O2               <---------ARR14(2)                     <-----------RAV1(2)<---------RAP2.3(3)<-----------HVH21         <---------TOE1(2)                 <---------At4g35610    <---------RRTF1(3)--------->O2            <---------ANAC46 >>>>>>>>TBF1    --------->At4g35610--------->CCA1(2)---------->DOF2              <---------ANAC58 <<<<<LFY        --------->ZAT2    <---------ARR14(2)===============bZIP_DOF      <---------ANAC58  <   aagaagaaaactgagcatcagctccaggtaagaagaagataggcggcgctgaagagaaagacgtcaccaccatttctaagcctttcgtattttcgcaacg  13937400                                                     --------->YAB1                                              --------->ANAC46                                           ---------->DOF2   <---------DEAR3(1)                                   ----------->GT1 --------->ANAC58                 --------->ANAC58  <---------ANAC58               <------ZmHOX2a(1) --------->ANAC58                 --------->ANAC58  <---------ANAC58          --------->HSFB2a(2) --------->ZAT18               --------->MYB46(3) -----------GT1             <---------HSFB2a(2) <---------ZAT18<------NtERF2  --------->ANAC46   tttttcgtctctgttttatatacacttggtctagaggatgaaaaacaaaggccactcaaaacgtcgtcgtttgtatttccacgaccaaggaaaaacaaaa  13937500                                   --------------->AGL15                                   <---------------AGL15                                   <----------DOF2                           ---------->DOF2          <---------YAB1              <-----------ARR10   --------------->AGL15    --------->ANAC46              <---------ARR11(1)  <---------------AGL15    --------->ANAC58              --------->ARR14(2) ----------------->AGL3    --------->ANAC58                        --              *TSS       <---------MYB52(2)  --------->ATHB12  XXXXXXXXXXXXXXXXXXXXX>MIR848      ----              <---------ARR11(3) <-----------------AGL3  --------->ANAC46                    --------             <---------CCA1(2)   <-----------------AGL2<-----------GT1 --------->MYB52(1)    <-------   tacagaaaacatcccaaatcttatccaactaaagttccttttatgggtgatttgattatacacgacaagggactaactaaaccaagtgttttctgtgcaa  13937600                                                                       <---------AHL20(2)                                                                  <---------ATHB12                                                             <---------At4g35610    <---------ZAT6                                <---------ANAC55(2)     <----------DOF2--------->AHL20(2) --------->GT1          --------->ETT(2)               --------->TOE2(3)<---------AHL20(2)       <--- ----->ICU4             <---------ETT(2)     ----------->GT1<---------TOE1(3)       ----------->GT1 ---->CBF      <------MYB83--------->ANAC46--------->ICU4 ---------->DOF2    <---------ANAC46  <----- --ZAT18       <------MYB46(1)  --------->ANAC55(2) <-----------GT1--------->AHL20(2)     ---------->DOF2   ttagtaaaatagaatgttggtatatgtagacatcacatatttgtaattagtaatttacctttaagctaatgaattaattttgtggagagttataaagctt  13937700                                                                            <------ZmHOX2a(1)                                                                          --------->MYB59       <----                                                                          --------->MYB111(2)   -----                                                                         <--------P --------->ANAC58                                                                       <------MYB83 --------->ANAC58                                                                       <------MYB46(1)         ------    <---------WOX13(1)                                                <---------AtMYB61        <-----   <---------ANAC58                            <---------YAB1   <---------WOX13(1)<---------ANAC58  <   <---------ANAC58                          <-----------GT1  --------->ATHB12    <---------ANAC58<--  --------->ATHB12              --------->ARR11(3)           --------->ICU4<------MYB83<-----------RAV1(2) ------YAB1                     --------->AHL20(1)           <---------YAB1<------MYB46(1)   -------- -----DOF2        <--------P    <---------ARR11(3) --------->AHL20(2) --------->MYB111(1)   <------ZmHOX2a(1)   ttattgattgccaagaacaggttgacatattggatatattggaaaatttacaattacatggacatgattggggaggtaggaagggcgagccagaggagga  13937800       <---------ANAC58       ----------------->AGL1       <-----------------AGL1       <---------ANAC58       <---------ANAC46    <---------RAP2.6(2) <---------MYB52(1) -----ARR14(2)                     ------>NtERF2 ---->ARR14(2)                 --------->ANAC58                                                 ----- --->ATERF1(1)          <---------ANAC58 <---------At4g35610   <---------DAG2                   <---- -ZmHOX2a(1)            <---------ANAC58 --------->At4g35610   <----------DOF2            --------->ATHB12 ---------RAP2.6(3)    <---------ZAT2  ---------->CDC5       ------>MYB46(1)            <----------DOF2 ----NtERF2            --------->ZAT2  <-----------RAV1(2)   ------>MYB83             --------->At4g35610 ->ALFIN1     <---------TOE2(3)--------->ANAC58             <---------ALFIN1       <---------At4g35610   gccgttgtggcctattgaggtatcgagcttgccacgctggctcagcggtctcttgctcaaacccacttttcatgtatagactcttcgctgcttcattgtc  13937900           --------->ANAC58           --------->ANAC58          ------->TEIL          --------------->AtSPL3       --------->ANAC58       --------->ANAC58      ------->MYC3     <---------MYB52(1)      <-------MYC3--------->ARR14(2) <-----------TGA1<---------GLK1(1)    <---------ARR14(2)                                            < <-----------HVH21<---------ARR14(2)  --------->ARR14(2)                                  --------->AHL20(2) ---->ETT(2)  ------->TEIL  ----------->RAV1(2)  <----------DOF2                <------ZmHOX2a(1)---- -----ETT(2)  <-------TEIL<---------YAB1 <-----------GT1           --------->ZAT18        <---------AHL20(2)   taccgtcacatgcacgtacatatccgttatgcctgaaccatattcacaactctttttaaaaacttcaattgcacaagtctaaggagtttgatttaaatgt  13938000  Previous    Next  AGI:  At4g28025.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO66511.1); contains domain Chlorophyll a-b binding protein (SSF103511) Range:  from: 13935610    to: 13937514    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g28030.1    Description:  GCN5-related N-acetyltransferase (GNAT) family protein. similar to GCN5-related N-acetyltransferase (GNAT) family protein [Arabidopsis thaliana] (TAIR:AT2G06025.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66575.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) Range:  from: 13937682    to: 13939150    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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