Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------ALFIN1                                                                                     --------->ANAC58                                                                                     --------->ANAC46                                                                                     --------->ANAC58                                                                                   <---------------AGL15                                                                                   ----------->RAV1(1)                         ------>NtERF2                                          --------->ANAC46                        <---------RAP2.6(2)                                     --------->ANAC58                        <---------RAP2.3(3)             <---------CCA1(2)       --------->ANAC58                      <-----------GT1    --------->ARR14(2)                   ---------->DOF2            <-----------GT1              <---------ARR14(2)            --------->CCA1(2)        <----------DOF2--------->RAP2.6(3)      <---------WOX13(1)    --------->ARR14(2)   --------->At5g28300 ------>TOE2(3)      ----------->HVH21   --------->GLK1(2)            <---------ARR14(2)  -----------   tcttaaaacacttttaagcgtttttgacggcccaattgatgcgaatatggattgactcttatctatacttcagatatgttcaaagccacacaaggtaaat  13900800                                                                                         --------->ANAC55(2)                                                                                         <---------ANAC55(2)                                                                                         <---------ANAC46                                                                                         <---------ANAC55(1)                                                                                     <-------GAMYB                                                                                    <---------MYB46(3)                                                                                   ---------->ID1                                                                                   <---------TOE2(3)                                       <-----------HVH21                     <---------GLK1(2)  --------->MYB52(1)                <---------ANAC58       --------->GLK1(2) --------->ARR11(3) >GT1                               <---------ANAC58       --------->ICU4    <---------ARR11(3)   ---   tgcataacggataacaattcccataagaaaaaatgtttcggtgtcaaactgtatatgagcaattctgaaacattctaaagattttgtggttatgtgttaa  13900900                                                ----------->GT1           ------------>CBF                                               <---------TOE2(3)         <-----------GT1                                    ----------->GT1                   <---------ICU4                            ---------->DOF2 --------->AHL20(1)  --------->TOE2(3)                    <---------CCA1(1)      --------->YAB1    <---------ALFIN1                    <---------RVE1(1) <------ZmHOX2a(1)    ------>ZmHOX2a(1)                        < ---------->DOF2   --------->ARR11(3)----------->GT1------------>CBF --------->ICU4           ------- ------>TOE2(3)    <---------ARR11(3)<----------ID1<-----------GT1  <---------TOE2(3)      ------->TEIL   acttaaagcatttgatagagagatatttttcaaagaaataggaaaaaataatgttacaatcctccacattaatgtttacaatccgtccatctgtacttga  13901000       --------->YAB1      <------ZmHOX2a(2)                                                                    ----------  --------->ETT(1)                --------->CCA1(2)                                     --------->AHL20(2) -----------HVH21 <---------ARR11(3)   ----------->GT1                             ------------>CBF ---->HVH21       --------->ARR11(3)  ----------->GT1    --------->YAB1           --------->TOE2(3)   catgtcggatcataatccaagataatgggaatacagatataagttaaaaatgaattcactcatagaaacttggaaggctatattcgtcaatataaaagag  13901100               <---------ZAT14               --------->ZAT14              <---------ALFIN1             --------->At4g35610             --------->ZAT14                                                                        <    --------->AHL20(2)                                                                            <--    ----------->TBP                                                                              <---  --------------->AGL15                  ----------->GT1                   <---------YAB1        ----  <----------DOF2                        <---------ANAC58             --------->YAB1         <-------  <---------------AGL15     <---------MYB46(3)                      --------->ANAC58         --------  ------>ZmHOX2a(1)        --------->ALFIN1                         --------->ANAC58        <-------- --------->TOE2(3)     <---------ZAT14   <---------ANAC58     ---------->DOF2             <---------ICU4 <-----------------AGL3--------->ZAT14   <---------ANAC46    ---------->DOF2           --------->YAB1 >DOF2    --------->At4g35610        <------------CBF        --------->MYB52(1)       <---------ATHB12   catcctttaaatagctgcacactggtacagtggttctactattgagtgaaaaaaaaaaaaaactaaaggcacgaataatttttgtctaatcaaaattatt  13901200                                 --------->ANAC58                                 --------->bZIP60(1)                                 <---------bZIP60(1)                          ------->TEIL                         --------->MYB52(1)        <---------------AGL15 ----------->TGA1 ------------CBF   <---------TOE2(3) -------AHL20(2)  --------->MYB52(1) ------AHL20(2)   <---------DOF5.7(2) ----->AHL20(2) --------->ARR11(3)     ---------->DOF2 --AHL20(2)   <---------TOE2(3)  --------->ANAC58                --------->ANAC58       --------->REM1(2) ->AHL20(2)   <---------TOE1(3) <---------------------WRI1 <-------TEIL              <---------ANAC58 -AHL20(2)    <---------YAB1  ----------->HVH21--------->ALFIN1  --------->ANAC58    <---------ANAC58   taaattgctgctatttaagataacgatgaacggtgacgaaacaaagaaggtggagagcgagtacatcaagaaacaccatagacacgagcttgtagagtct  13901300                                                                                    <---------DOF5.7(2)                                                                                    --------->MYB52(1)                                                   <----------DOF2                --------->ARR11(3)                                        ------->TEIL    <----------DOF2          --------->YAB1                 ---------->DOF2   --------->At4g35610 <---------ANAC58        <---------TOE2(3)         --------->ZAT14   ---------->DOF2  <---------ANAC55(2)               ---------->DOF2   ------->TEIL <---------MYB52(1) ------>ZmHOX2a(1)   <---------ANAC58   <---------ZAT6          ---   caatgtagctctacgctcgttaagcacatcaaagctcctctgcatctcgtaagctttgctttgctctgtttttcaagtgttaaagataacgatttttgag  13901400                                                          ----------->RAV1(1)                                                 <-------TEIL                                                --------->CCA1(2)                                                --------->GLK1(2)                                                --------->ARR14(1)                         <---------                                  <---------WRKY38(1)    --------->MYB46(3)              <---------ANAC46                                  <---------WRKY12      ------->TEIL                     --------->ALFIN1                               ----------->GT1 --------->ARR11(1)                    <------MYB83  --                              --------->ALFIN1 --------->ARR14(2)                    <------MYB46(1)                              <---------AtMYB61<---------ARR14(2)                   --------->MYB111(1)                            --------->ALFIN1  <---------HSFB2a(1)                  <---------MYB55(1)                         --------->DAG2       <---------GLK1(1)                 --------->ZAT6  <----      --------->ATHB12  --------->DAG2       ----------->ARR10                 <---------YAB1   <---- -------->GT1          ---------->DOF2      <------ZmHOX2a(1)         --------->ANAC46 --------->ALFIN1   atgttaaatgatttgttttgtttggaaaaggtgtggtcaattgtgaggagattcgatgaaccacaaaaatacaaaccatttatcagtaggtgtgtggtac  13901500                      <---------ANAC58                      <---------ANAC58                 <---------MYB46(3)                 <------MYB83                 <------MYB46(1)                --------->MYB111(2)                --------->MYB111(1)                <---------AtMYB61                --------->MYB46(2)                --------->MYB59                <---------MYB46(3)               <---------MYB55(1)            <---------AtMYB61       --------->At4g35610       --------->ZAT2 <---------ANAC46      --------->GLK1(2) ------AtSPL8  <--------P                               <---------At4g35610 --------->GT1<-------GAMYB               <---------GLK1(1)    ---------->DOF2      --------->GLK1(2) -----TOE2(1)--------->MYB55(2)     <---------ARR14(2)  --------->At4g35610        <---------GLK1(2) -----TOE1(1)<---------MYB46(3)     --------->ARR14(2) --------->ANAC46 <---------TOE2(3)         ---   aaggtaagaagctggaggttggtagcgtaagagaagtggatttgaaatctggattaccagctactaaaagcactgaggtattagagattcttgacgacaa  13901600               --------->YAB1              <---------At4g35610 --------->YAB1           <------NtERF2    <---------MYB46(3)        <---------LBD16  <------MYB83                                      <---------ATHB12    <---------ARR14(2)   <------MYB46(1)                              ------->TEIL    <---------GLK1(2)   --------->MYB111(1)                          <-----------GT1    --------->KAN4(2)   <---------MYB46(3)                        <---------------AtSPL8 <---------YAB1    --------->ARR14(2)  --------->MYB55(2)                    ------>ZmHOX2a(1)         <---------GLK1(2)   <----------TaMYB80   --------->MYB111(2)   --------->At5g28300 --------------->AtSPL8<---------ARR11(3)  <---------KAN4(2)     <---------AtMYB61    ----------->GT1 --------->TOE2(3)        --------->ICU4 ------>YAB1  --------->At4g35610<---------YAB1              --------->TOE1(3)   <---------ETT(1)   tgagcatattctcggcatcagaatagttggtggtgatcatagactcaaggtaaattgaaatttccttaaatgtaccattcattccgacaagattattgtt  13901700  Previous    Next  AGI:  At4g27920.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53160.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO69376.1); contains domain SSF55961 (SSF55961) Range:  from: 13901226    to: 13901976    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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