Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->ANAC46                             --------->ZAT6                             --------->REM1(1)                            -------->P                      <-----------HVH21                            ------>MYB83          <---------REM1(2)                            ------>MYB46(1)       <---------ZAT14  ------>MYB83                 -----                          --------->AtMYB61       --------->ZAT14<---------MYB111(1)          -------                          <---------MYB59--------->ZAT14 <---------ZAT14                      <------                       <------ZmHOX2a(1) <---------ZAT14 --------->ZAT14                      -------                   --------->TOE2(2)   <-------MYC3  --------->ANAC46                        <-------                   --------->TOE1(2)   ------->MYC3<---------ALFIN1------>MYB46(1)          <--------   tgtgagagagagtcacaagaacataggacctacactaaacatgtgtagtgtctacactctacagtcacctactatacaagttgctaaatactactacgta  13890300                                      ---------->ID1   <---------ARR14(2) ---->SPL7                        <---------ANAC58     <---------GLK1(2)       --------->MYB46(3) -->TOE1(2)               <---------AHL20(2)           --------->ARR14(2)    <-----------GT1 ---SPL7                  --------->AHL20(2)           --------->ARR11(3)  <---------WOX13(1) -->TOE2(2)           <---------AHL20(2)          ----------->RAV1(1)   --------->ICU4          ----- --ANAC55(2)          --------->AHL20(2) ------>ZmHOX2a(1)       --------->AHL20(2)          -------- -------AtSPL3  ----------->GT1   <---------ANAC58--------->MYB52(1)    <---------YAB1<----------DOF2   cgacttgtttagttagaactgcaaaaaattaaacttgtttgtcctctaatcccaacagattttgtttttatatactgattaaccactgctttgttacaac  13890400                                                                                                -----                                                                                            ---------                      <---------ANAC55(2)                                                   <--------                 --------->ANAC58                                                       <-----------ARR10                 ----------->GT1                                                        --------->ARR11(3)                 --------->ANAC58                 --------->YAB1                        <---------ARR11(3)                 --------->HSFB2a(1)       --------->YAB1                   <---------ANAC46<-------- ---->MYB46(3)   <---------HSFB2a(1)  <---------YAB1                  --------->DAG2   --------->CCA1(1) ->REM1(1)---------->DOF2     <-----------GT1   ------->TEIL         ---------->DOF2   --------->RVE1(1)   aacttacaacttgaaaggaacgttacatgaaataactcttctcattcatgaatcatcttctctacataagaaaaagttgtgcataagaaatatctacact  13890500                                                                                              -------                                                                                            ---------                                                                                           --------->YAB1               <-------GAMYB                        --------->AHL20(2)                 -------------- ------>GT1   <---------MYB46(3)                    <---------AHL20(2)           ------------>CBF >ZAT14       ----------->GT1                 <-----------GT1                    <---------AHL20(2) -ZAT14      <---------ANAC46           <----------DOF2<-----------GT1       --------->AHL20(2) -REM1(2) --------->ALFIN1  <---------GLK1(1) <---------AHL20(2)             <---------AHL20(2)  ----   gaaaaaatggcagtgggggttacatttttgatttctctaattctttatttacatttatttctattttcatgttaaacatttatttcaatgccaaaataat  13890600                                        <---------ICU4                                       --------->ICU4                                     --------->YAB1                                     <--------ATHB1                                ------------>CBF              ----------->TBP  ----------->RAV1(1)            --------------->AGL15    <---------ICU4           <-----------------AGL2   <---------ATHB12   ----------->GT1           <---------ZAT14 ---------->DOF2             --------->ZAT14 -->YAB1 <---------ARR11(3)  --------->ZAT18         --------->AHL20(2)                             - >AHL20(2) <-----------------AGL3   <---------ATHB51 <---------AHL20(2)                            <- --->AGL1--------->ARR11(3)  <---------ZAT18   --------->ANAC46 <-----------HVH21  <---------YAB1 --- ------>DOF2<---------------AGL15   --------->ICU4*TSS   --------->RVE1(1)    <---------ICU4     <---   aaagaaagtaaaatctataaatgggattcagtgcaccaataattcttacacataaaaaaatatcagtatcaggcctctcaacatcacaatagggcaagag  13890700           --------->ANAC58           --------->ANAC58           --------->ANAC46          --------->ZAT18          <---------ZAT18          --------->ZAT14          <---------ZAT14          <-------TEIL     ---------->DOF2  ------>NtERF2 <----------ID1 <---------PCF5 <---------PCF2 -------->ATERF1(1)                                                                             ----- --------ATERF1(1)       <-----------RAV1(2)                                        --------->ZAT14 ------>ALFIN1          ------>ZmHOX2a(1)  <-----------------AGL1   <----------DOF2 --------->ZAT18 ---ZmHOX2a(1)   <----------DOF2        --------->ARR14(2) <----------DOF2          <---------ZAT18   gaggggccaaagtacacaactttctcctcagggtatgctccaaattcccaacttggcctctctttttcatcttttgggtttttatgttcactcttctctg  13890800                     <------ZmHOX2a(1)                    --------->ANAC46                   --------->LBD16                  <---------LBD16                                                          <-------TEIL                  <---------HSFB2a(2)                                              <----------DOF2            --------------->AGL15                                                 <---------ANAC58        <----------DOF2                                                           <---------ANAC58      ------>ZmHOX2a(1)                 ---------->DOF2         ------->TEIL <---------ANAC58       - ---->At4g35610   --------->HSFB2a(2) <---------ATHB12  <---------TOE2(3)    <---------ANAC58 -------   cttcattcctctttctacttccaggaaataaaaacttctaatcaaagagcaagagattaagaaatgtatgcagaaactagcttagctttccgattcatgc  13890900                                                 ---------->DOF2                                               ------>ZmHOX2a(1)     <<<<<<<<<TBF1                            --------->TOE1(2) --------->ARR11(3)                     --------->AHL20(2) --------->At4g35610      <---------ZAT14 <---------ARR11(3) <-----------GT1   <----------DOF2<---------ARR11(3)         <-----------GT1 -------->GLK1(1)  <-------TEIL  <---------ARR11(3)--------->ANAC58        <----------DOF2    <------ -->AtLEC2   --------->LBD16     --------->ARR11(3)--------->ANAC58      ---------->ID1     ------>ZmHOX2a(1)   agagttcttcttctccagagattcaccaatttgaagacctctttaaatcctacaagctctctgatgaaatggtttgtctttttgacttcacttcctcttt  13891000                                               <---------WRKY18(1)                                              ----------->HVH21                                             <----------DOF2                                             <---------WOX13(1)                                            <---------ANAC58                                    <----                                            <---------ANAC58                             <---------ZAT6                                  <---------ANAC58                                     <---------ANAC58   <-----------GT1                <---------ANAC46                                     <---------ANAC46 <-----------HVH21                <---------ANAC58 <----------DOF2    <---------WOX13(1) --------->ALFIN1 ----DOF2        <---------AHL20(2)         <---------AtLEC2        --------->ATHB12   <---------ANAC58   ttttgtcactgcatttgatttttttgattttgggtttcttgtctctgcttgacctttgatgaaattaagttgattgatgaagacaattggagtgtgaagg  13891100                    <---------ARR14(2)                  <---------ANAC58                    --------->ARR14(2)                  <---------ANAC58       --------->ZAT6  <---------YAB1      <---------------AGL15 --ZmHOX2a(1) --------->ATHB12             <----------DOF2                    ----------->GT1       -   agatggaaaacactaattagtggatattagtggcaaagttttgtgctttaagtggttttcttgagaaaatttgtggtaactggaaatttgattcgatcta  13891200  Previous    Next  AGI:  At4g27900.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48522.1); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 13890650    to: 13893001    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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