Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  ---------->DOF2          --------->GLK1(2)                   --------->ANAC58          --------->ARR14(2)                  --------->ANAC46          <---------ARR14(2)                  --------->O2   --------->ANAC58         <---------ARR14(2)                   <---------O2<---------ARR14(2)         --------->ARR14(2)                   --------->bZIP60(2)         <---------GLK1(2)                    --------->TGA1a--------->ANAC58      --------->LBD16                         --------->ANAC58--------->LBD16    ------>ZmHOX2a(2)                       <---------ALFIN1<---------LBD16   <------ZmHOX2a(2)                       --------->MYB46(3)--------->ANAC46  --------->ARR14(2)                      -------->P      --------->ARR14(2)  <---------ARR14(2)                      ==============MYC_MYB      ------->TEIL -------LBD16   ========================================bZIP_DOF   <<<<<<<<<EIN3                <----   cctggatccgagattctgcaaagcaggcagactaaacaaatactaaccacgtcttctctaaatccgcaatgtatatgatcaaatgacttagtaagaagct  13849700                                  <---------ZAT14                                  --------->ZAT14                                 <-----------HVH21                                --------->ANAC46                              <---------ALFIN1          <-----------GT1   -------->P     <---------KAN4(1)      --------->TOE2(3)     --------->SPL7 --------->KAN4(1)      <----------DOF2       ------>MYB46(1)<---------HSFB2a(1) <----------DOF2 <----------DOF2--------->bZIP60(2)--------->ZAT6                             <------ ------DOF2  <----------DOF2------>MYB83   --------->HSFB2a(1)        <-----------GT1<----------DOF2   tttctttactttaaactttctttccatccctaccacatcactgggatgttccaacactatatcacttggatgttaccaagtcttgttctttgatttcttt  13849800                                                --------->ARR14(2)                                               ----------->HVH21                      ---------->ID1  --------->YAB1         <---------MYB46(3)              --------->GLK1(2)      <---------YAB1      <-----------RAV1(1)                        -        --------->AHL20(2) <---------MYB52(1)<---------ANAC58<------MYB46(1)                 <------ZmHOX2a(1)  <-----------GT1<----------DOF2 <----------DOF2<---------ARR14(2)                           ======== ----DOF2 <-----------GT1 <----------DOF2    <---------ANAC58<------MYB83                    ========   cttcttacattttaacaatcttttgttcctttaggctttatgatatgtcgtaaccggttttgttggtttgctataaatacacacatatagacagaggaag  13849900                                     <------NtERF2                                    ------>NtERF2                             --------->ANAC58                                   --------->ATERF1(2)                        --------->ANAC58                                   <---------DEAR3(1)                        <---------GLK1(1)                                   <---------ATERF1(2)                      ---------->DOF2                                   <---------RAP2.6(2)                     <------ZmHOX2a(1)                                   <---------ANAC46                      <---------TOE2(3)                       --------->MYB52(1)                                <---------TOE1(3)                       <-----------GT1                             --------->ATHB12          ------>ZmHOX2a(1)       --------->RAP2.6(3)             <---------ATHB12         --------->TOE2(3)        <---------LBD16                 --------->ICU4        ------>ZmHOX2a(2)     <----------DOF2                    <---------TOE2(3)       --------->DAG2       <------ZmHOX2a(2)    ------>MYB46(1)                    <---------AHL20(2)       ---------->DOF2      <---------ARR14(2)    ------>MYB83                      <---------AHL20(1)       <---------ATHB12      --------->ARR14(2) --------->DEAR3(2)  ----------->GT1  <---------AHL20(2)   --------------->AGL15 -------->ATHB12  --------->AHL20(2)--------->RAP2.6(2)       --------->AHL20(1)   ------------>CBF ==============HOX2a_HOX2a------->GAMYB   --------->MYB52(1)  --------->AHL20(2)   <------NtERF2 =============HOX2a_HOX2a<------------MYB.PH3(1)<---------MYB46(3)<---------YAB1 --------->RAP2.3(3)   agtcattggatcctcaacgaataaataaccgactttggcggcaaaaacggttgatagaacataatttaatgatttaaggaaagcccccaataaagcaaat  13850000                                                                                                    -                                                                                                    -                                                    *TSS                                            -                                                   --------->ZAT2                                  --                                                   <---------ZAT2                         --------->ANAC58                                              --------->ANAC58                            --------->ANAC46                                              --------->ANAC46                            --------->ANAC58                                              --------->ANAC58                          <-----------GT1                                             ------>MYB46(1)                   <---------MYB46(3)  --                                             -------->P                       <---------AtMYB61    <-                                             ------>MYB83     <---------HSFB2a(2) <---------MYB46(3)-                                             --------->SPL7  <---------LBD16 ----------------------->TaNAC69(2)                                            <---------ALFIN1--------->MYB52(1)--------->ALFIN1     <-                               <---------ANAC58   ------>NtERF2--------->LBD16<---------DEAR3(1)  ---                               <---------ANAC58  <---------ALFIN1         <-----------RAV1(2)    ----            ------------>CBF<----------DOF2<---------MYB111(1)--------->HSFB2a(2)<---------AtMYB61<--   acaaaaacagaattagcaatcttcgtggccctttcgtcttctctccctaccccaccttggactaccggaaaatggccaaggtggtggtttacacgatact  13850100                                                                                       --------->SPL7                                                                                     ----------->HVH21                                                                                     <---------SPL7           --------->At4g35610                                                     <---------At4g35610      --------->AtMYB61                                                           <------------------SPL14     --------->MYB46(3)                                                         ------>NtERF2    ------>NtERF2                                                               <------NtERF2   --------->DEAR3(1)                                                          --------->DEAR3(1)   <---------ALFIN1                                                            --------->RAP2.6(2)  --------->ERF1                                                               --------->RRTF1(2) -------->ANAC46                                                               --------->RAP2.3(2) ------>GAMYB                                                                 <------NtERF2 -------->RAP2.6(2)                                                           --------->RAP2.3(1) ------->MYB46(3)                                                            <---------ATERF1(1) ------->DEAR3(2)                                                            ------>NtERF2 --------MYB55(2)                                                            --------->LBD16 -------->DEAR3(1)                 --------->ANAC58                         --------->ANAC46 -----------AtMYB77            --------->YAB1                              ------->GAMYB      <------ ----->P --------->YAB1   ------>ZmHOX2a(1)                                <---------LBD16    <------ ----->MYB52(1)        ------>ZmHOX2a(1)                                   --------->MYB46(3) <------ -------At5g28300------>ZmHOX2a(1) --------->ANAC58                  --------->YAB1--------->At4g35610   aaccgccaccatcatcttcctcatcctcctcgctcataagaaacaaaaccagactcaatccattgagggtctcataacccgccgcatcggacggaggctt  13850200                 <---------MYB52(1)                 <----------DOF2             ---------->ID1        <---------MYB46(3)      <---------MYB52(1)     --------->LBD16    <---------DEAR3(1)                                         --------->SPL7       ---------->DOF2    <---------DREB2C(2)       --------->ARR14(2)             <---------SPL7    <---------DEAR3(1)   <---------LBD16        <---------LBD16                  <---------------AtSPL8<------NtERF2  --------->MYB52(1)  ----------->HVH21                  --------->ZAT2       --------->ATERF1(1) ---ANAC58  <-----------GT1   <---------ARR14(2)         <---------ZAT2     <---------RAP2.6(2) ---ANAC46  <---------WRKY18(1)                         --------->GLK1(2) --------->REM1(2)  -------- ---ANAC58 ----------->HVH21--------->LBD16        ---------->DOF2       --------->ALFIN1 <------ZmHOX2a(1)   gaaatgccggtgtttgaccctttggtgacccggattgagaggttgtctcatgagaaagaagctggtacgaagaccgtggaggctgcgaaagaggagaaag  13850300                                                                            ----------->HVH21                                                                           <---------WOX13(1)                                                      <------ZmHOX2a(2)   <---------ANAC58                                                     --------->ARR11(3)   <---------AtLEC2                                                    <------ZmHOX2a(1)     <---------ANAC58                                                 --------->YAB1       ------>ZmHOX2a(1)                                          --------->ANAC58            <---------At4g35610         <--               <---------ARR14(2)         --------->ANAC46 --------->ARR11(3)                    <---   <---------YAB1                         --------->ANAC58 <---------ARR11(3)    --------->O2    <--- -->DOF2   <------ZmHOX2a(1)            --------->ZAT6=======================HOX2a_HOX2a    ---------   atgatatgtttgaggagtattttgcacaagagagaaggcttaacacgacaatgaggatcaagttcttgtttcctctgcttgacgcgtctccaagagatgg  13850400                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                          --------->ARR11(3)                                                                          <---------ARR11(3)                                                                      ---------->DOF2                                                                  --------->DREB2C(2)                                                                  --------->RAP2.6(2)                                                                  --------->DEAR3(1)                                                                  ------->GAMYB                                                                 --------->DEAR3(2)               ---     --------->At4g35610                   <---------At4g35610   --------->MYB46(3)               ---   <---------ZAT18                         --------->At4g35610 <---------GLK1(2)              <------ZmHOX2a(1) --------DOF2                         ------->GAMYB            --------->ARR14(2)            <------- ------ANAC58 <---------ARR11(3)     --------->MYB46(3)        <---------ARR14(2)         --------->CCA1(2) ------ANAC58 --------->ARR11(3)    <---------At4g35610     --------->HSFB2a(2)  <---------At4g35610 >CCA1(2) ---------->DOF2          ----------->RAV1(1)      <---------HSFB2a(2)  --------->At4g35610<   ctttgtgagcttgaaagagcttcagacatggatgatgcaacagacagaagacaacatggtttacagaaccgccaaagagcttgagctacaagataaggac  13850500                                                            <---------AHL20(2)                                                            --------->AHL20(2)                                                            --------->AHL20(1)                                                            --------->ARR11(3)                                                            <---------AHL20(1)                 <<<<<<                                                            <---------ARR11(3)         --------->ARR11(3)                                                      --------->YAB1                   <---------ARR11(3)      <-----------HVH21                               ----------->GT1                  <---------GLK1(2)  <---------DEAR3(1)                             --------->ARR11(3)                 <---------HSFB2a(2) <---------ORA47(1)                              <---------ARR11(3)              ------>ZmHOX2a(1) ------>ANAC58                                 --------->ANAC46                ------>ZmHOX2a(2) ------>ANAC58                 --------->TOE2(3)<<<<<<<<<<<<<<<<<LFY     <----------DOF2   <--------- ---ID1 --------->YAB1    <---------ANAC58     --------->ANAC58  <---------AHL20(2) --------->HSFB2a(2) ------ZmHOX2a(1)         <---------ANAC58     --------->ANAC58  <-----------GT1--------->TOE1(2)   aaggacggtgtcataactttcgaagagtacttgcctcaattctctaaacaagacattggtaatatattaacttgtctttgatccttcgagatttttcttc  13850600  Previous    Next  AGI:  At4g27780.1    Description:  ACBP2 (ACYL-COA BINDING PROTEIN ACBP 2). similar to ACBP1 (ACYL-COA BINDING PROTEIN) [Arabidopsis thaliana] (TAIR:AT5G53470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48627.1); contains InterPro domain FERM/acyl-CoA-binding protein, 3-helical bundle; (InterPro:IPR014352); contains InterPro domain Acyl-CoA-binding protein, ACBP; (InterPro:IPR000582); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 13847555    to: 13849893    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g27790.1    Description:  calcium-binding EF hand family protein. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G08580.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ52638.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 13850052    to: 13851539    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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