Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <----------DOF2                                                  <---------DAG2                                              <-----------GT1                                           --------->ATHB12                                       --------->YAB1                                       --------->ATHB12                                       -------->ATHB1                                       <--------ATHB1                                       --------->ATHB51                                       <---------ICU4                                      --------->ICU4                                      <---------YAB1                                    --------->WOX13(1)                         <---------AHL20(2)--------->YAB1          --------->ARR11(3)          <-----            ------>ZmHOX2a(2)      ------------>ATHB5              <---------ARR11(3)          ------        <---------YAB1----------->GT1 <---------ATHB12            --------->At4g35610 <---------ATHB12   tgttcacattttgatcgaaagttttagtaaattagagccaatcattgattacccttttctccaatagaagctctctcttctgtctccaatcgacttcagc  13827400                                                   <-----------GT1                                                 <---------DAG2                ------>ZmHOX2a(2)                                              ------>MYB46(1)                 <------ZmHOX2a(2)                                              ------>MYB83                   <---------ARR11(3)                                            <---------MYB59      <------ZmHOX2a(2)        --------->ANAC46                    ------->GAMYB --------->YAB1     --------->ARR11(3) ----At4g35610                  ----------->GT1  <----------DOF2--------->ARR11(3) --->At4g35610   --------->MYB52(1)      --------->MYB52(1)     <---------ARR11(3)   taaaccctccaagagacacaaacagaagaacgagaggttaatctaaccgaactttaccattcacaagatcgatacacaagatcgctctcgctctacaagt  13827500                                --------->ZAT14                                --------->ZAT18                        <-------GAMYB                       <------MYB83                                                   --------->LBD16                       <---------MYB46(3)                                             ------>NtERF2                       <------MYB46(1)                                                ----------->RAV1(1)                      --------->MYB59                                               <---------LBD16                      <---------AtMYB61                               <---------RAP2.6(2) <------NtERF2                  <------MYB83  <---------ZAT14                  --------->ATHB12<---------GLK1(1)                  <------MYB46(1)        --------->YAB1    --------->LBD16   <------ZmHOX2a(2)                 <---------TOE1(2)     ------->TEIL      <---------LBD16------>NtERF2--------->ANAC46           --------->ALFIN1     <-------TEIL          ----------->HVH21 <---------At4g35610   -------   tgtatacctgcaggtttggcaggtttggttgaagtgcattgaatcttaagcgttttgtgaccggaaaccattgctgccgatcgaactccggcagagaaaa  13827600                    --------->ANAC46                    --------->RAP2.6(2)                    --------->ANAC58                                                    <---------At4g35610             <---------GLK1(1)                                                          --------->At4g35610             --------->GLK1(1)                     --------->ALFIN1                     --------->ZAT2       --------->LBD16                             <------NtERF2                        --------->HSFB2a(1)      --------->HSFB2a(2)                        <---------ANAC58                       --------->HSFC1(2)      <---------HSFB2a(2)                        --------->ALFIN1                   ------>ZmHOX2a(2)     <---------LBD16--------->ANAC58             <---------ANAC58          <---------CCA1(2)      <--   <---------ARR14(2)       --------->TOE2(2)    <---------ANAC46     --------->ANAC58  <---------HSFC1(2)   --------->ARR14(2)  ---------->DOF2        --------->DAG2          --------->ANAC58  <---------ZAT2 --->DOF2  <------ZmHOX2a(1)--------->TOE1(2)--------->SPL7       <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   gagtgtttccggaggatttcagacgcaaagcctgcgatgaagatgggtaaggcgtggctattgaagtaagtgaagccatctcttgatcgaagctgcttct  13827700                                                   --------->ANAC58                                                   --------->ANAC46                   <---------CCA1(1)               --------->ANAC58                   <---------RVE1(1)       <---------AHL20(2)                  <---------ARR11(3)       --------->AHL20(2)         <---------MYB52(1)               <---------AHL20(2)                --------->TOE1(2)       -    --------->GLK1(2)  <---------AHL20(2) --------->AHL20(2)              ------->TEIL             -- -------MYB52(1)  --------->ARR11(3)    --------->GLK1(2)      ---------->DOF2        <----------DOF2   gttaagtttctgttttttcagatattttcttgaaaatgagagaatttaattgcacgataatggaagaaagacgatgaaactgcgacttcttttcttcttg  13827800                                              <---------CCA1(2)                                           <-----------GT1                                        <---------GLK1(2)                       <---------ANAC58 --------->ARR14(2)                  --------->ALFIN1  <---------LBD16       <---------ARR11(3)    <---------AHL20(1)       --------->GLK1(2)     --------->AHL20(2)                                 ----------->RAV1(1)      --------->RVE1(1)<---------ANAC58 <---------ARR14(2)                   --------->ANAC46 <------ZmHOX2a(1)<-----------RAV1(1) --------->LBD16                ---------->DOF2 ---------->GT1  ------->MYC3<---------AHL20(2)                    --------->YAB1              <----- ------->MYB59   <-------MYC3*TSS <-----------GT1 <----------DOF2 <------ZmHOX2a(2)   <---------ARR11(3)   ttaggaaaaaatctgaacatgtggtgcttattttattttcccgattttctatcttttgtattcaaacgatcaaaagttgacacaacataatcttctctta  13827900                          <---------AHL20(2)                          --------->AHL20(1)                          <---------AHL20(1)                       <---------AHL20(2)                                                       <----                       --------->AHL20(1)                                            ------>ZmHOX2a(2)          --------->AtMYB61                                 ------>NtERF2      <---------WOX13(1)  <----------DOF2      --------->AHL20(2)  <----------DOF2 --------->ANAC46  --------->ATHB12   <---- ----CCA1(2)      --------->AHL20(2)<---------CCA1(2)<---------YAB1         <---------YAB1-----------   tcttcttttcgaccaaaacataaaataaaatatttctcttatcttctttagttttctcattgcgccattcttgagtttttgattggatcgcttagatttg  13828000                                               --------->AHL20(2)                         <-----------GT1       <---------AHL20(2)             --------->ANAC55(2)              <---------WOX13(1)--------->YAB1     <---------ALFIN1  ----------->RAV1(2)<-------GAMYB         <---------YAB1    <---------ICU4   --------->PCF2 --MYB83    <-----------------AG       <---------DAG2     --------->YAB1      --------->PCF5 --MYB46(1) <---------TOE2(3)          <----------DOF2 <----------DOF2     <---------ATHB12 >ARR10    <-----------GT1       <-----------GT1<---------AHL20(2)       --------->MYB52(1)   gttaacctggtttttacgttttcggttataccggtttacctctttttgattaattttctttcacaattacaaaaccaatggtcccatactcccatttgct  13828100                                                                       --------->TOE2(3)                                                                    <---------CCA1(2)                                                                  <----------DOF2                               <---------SPL7   <-----------GT1   <---------DAG2 <---------DAG2    <-                       --------->ARR11(3)  <---------MYB52(1)   ------>NtERF2 <-----------GT1  ------                  --------->At5g28300    ----------->GT1     <---------At5g28300 <----------DOF2  --- <-----------GT1 ----------->GT1    ---------->DOF2         <-----------GT1--------------->AtSPL8 ---   agtttaccaatttttaaaacggtaagatttagtcgtacaaaagctgttattttcagttttttttaccgccttatcttattgtacttttttttttcatcaa  13828200                                                               <---------ZAT18                                                               --------->ZAT18                                                         <----------DOF2                                                    <-----------GT1                                                --------->AHL20(1)  --------------->AtSPL8                        <---------ARR11(3)           <-----------RAV1(1) --------YAB1                                   <-----------ARR10      <---------AHL20(2) --->WOX13(1)                                   --------->ARR11(3)     --------->AHL20(2)           < ------>TOE2(3)               <---------CCA1(2)--------->CCA1(1) --------->At4g35610                - ------>YAB1    --------->MYB52(1)             --------->RVE1(1) <---------At4g35610       --------->TOE2(3)   tcttattgtacttcttactaatggttatctctctatctttcatctaaaaatatcttaccctttagtgagctcttaaattatgttgttcaattttcttaac  13828300  Previous    Next  AGI:  At4g27700.1    Description:  rhodanese-like domain-containing protein. similar to rhodanese-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G08920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48606.1); contains InterPro domain Rhodanese-like (InterPro:IPR001763) Range:  from: 13826380    to: 13827829    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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