Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                                            <------ZmHOX2a(2)                                                   --------->ZAT14                         --------->ARR11(3)                                                   <---------ZAT14                         <---------ARR11(3)                                                 --------->TGA1a                         <------MYB46(1)      <-----------GT1                            ===============================================MYC_MYB  --------->YAB1                                 ==========================================bZIP_DOF --------DAG2                                  <---------ALFIN1            <----------DOF2<------ZmHOX2a(1) ---------DOF2         --------------------->WRI1================================bZIP_DOF<------MYB83 -ZmHOX2a(2)          --------->ATHB12       <---------ALFIN1         <----------DOF2  <--------P >LBD16              <---------YAB1      <-----------HVH21    ----------->GT1   <----------DOF2   acttttataaacgttctggtgttttcattggaagtttagaatttgtcacacacttcagtttattctgtaaaacttttcttttctttttggtaggatcatt  13823200                   ---------->DOF2            --------->ZAT14                    ------->TEIL            <---------ZAT14                   <---------GLK1(2)           <---------ZAT14            --------->ZAT18           --------->REM1(1)             >>>>>>>>>>>>>>>>>LFY    ---------       <---------YAB1    ----------------------->TaNAC69(2)<-----------------AGL1 <---------ATHB12<-- ->ATHB12 --------------->AtSPL8    <-----------GT1        --------->YAB1 --------->ZAT14   <--------   tgataacttatgactgtactaaaaagtctctcaagtttctacattactgaatctctcttgttcataatatggccactgttctcactcatgggttacttaa  13823300                                                                 <---------YAB1                                                             --------->KAN4(2)                            <---------MYB52(1)              <---------KAN4(1)                      --                            --------->DOF5.7(2)            --------->ICU4                        <---       <----------DOF2     --------->TOE2(3)               <---------YAB1                        ----  <-----------GT1   --------->ANAC55(2)               ----------->GT1                           ----- >ANAC55(2)      --------->ZAT14                    --------->ZAT14                           <------ -------ZAT6    <----------DOF2                     <---------ZAT14                  --------->TOE2(3) -ANAC55(2)     <---------DAG2        --------->TOE2(3) --------->ICU4         <-------TEIL--------->AHL20(2)   gtgttaactctttcttcactttacttaatcgttaatggaaccttgatcaatgtgtgaagtgattattctgaatgtataagtttcatacatcaatataaaa  13823400                                                               <----------DOF2                                                              <---------ANAC58                                                              <---------ANAC58                                                   --------->At4g35610                                                   <---------At4g35610         <---------TOE2(3)                    <---------bZIP60(1)   <----------DOF2     <----------DOF2                          --------->bZIP60(1)  <---------ANAC58 ------->TOE2(3)       <---------ZAT18  <---------WRKY38(1)  <------------------------ANAC81 ------ARR11(3)        --------->ZAT18 --------->WRKY18(1)<----------DOF2                        <--- ----->ARR11(3)      --------->At4g35610<---------WRKY12<------------------------ANAC81  <---------ANAC46 ---->RVE1(1)  <---------YAB1   --------->ZAT18    ----------->RAV1(2)  ---------->ID1   <---------ANAC58 ---AHL20(2) ----------->GT1    <---------ZAT14<-----------HVH21   <---------ANAC58      <---------ANAC58   atctcaactttgagattgttattagcgcacattgtgcaatggtcaatggtgtcatctgggctttgctttgctttgttttttttttgactgggcttgtata  13823500                                                                            <---------DAG2                                                                            <----------DOF2       <--                                                                           <---------DAG2         ---                                                                        ------>ZmHOX2a(1)       <----                                               <---------At4g35610  --------->ARR14(2)        <------                      ---------->ID1   <---------ANAC58          <---------TOE2(3)            <------             ---------->DOF2           <---------ANAC46         ---------->DOF2               <------ ------At4g35610  <----------DOF2      <---------ANAC58        <---------AHL20(2)      ------------>CBF   gctgattagagagattaaagctttgttttttttttgactgggcttgtatagctgattagagagatttaaagttcctcccttttctatttcccaatttcgt  13823600                                                           <---------WOX13(1)        <---------ANAC58                                  <---------ANAC58    <---------DAG2        ------>ZmHOX2a(2)               <---------ANAC58    <----------DOF2     <---------ARR14(2)           <---------ARR14(2)  *TSS  <---------ANAC58--------->ARR14(2)           <---------GLK1(2) <-----------GT1        <---------ARR11(3)         ----------->ARR10                              --- -------MYB46(3)        --------->ARR11(3)        --------->YAB1                             <------MYB46(1) ------>MYB52(2)    --------->LBD16            --------->WOX13(1)                            -------- -----MYB52(1)     <---------ANAC46           --------->MYB46(3)                             <------MYB83 ---ANAC58    <----------DOF2         --------->ANAC46--------->GLK1(1)              <---------ZAT2 ---ANAC58   <---------DAG2         ----------->RAV1(1)   <---------AtLEC2           --------->ZAT2 - ---ANAC46  ----------------->AG --------->HSFB2a(2) --------->ARR14(2)              --------->At4g35610   ttgttacttttcttgccttttccgtcgatcttcttctccaacacaacaacaatcagatttgcttgattcaattacgctcttaacatcagcttggaaggta  13823700                           --------->HSFB2a(2)                           <---------HSFB2a(2)                          <---------LBD16        --------->ANAC58<---------ARR14(2) ------>MYB46(3)<-----------RAV1(1)                              --------->ATHB12 --->GT1--------->ANAC58<---------AGP1            <---------ANAC58                         <---------YAB1 -------->MYB52(1) <---------REM1(1)              <---------ANAC58                    ------>ZmHOX2a(1)   actactggtctcgcaattgtgttgtagttctgggtctcagtttttctcactggctcgctcgtactcttgatttctatcgaaccgagtcctgttcttattc  13823800                                          <------MYB83                                          <------MYB46(1)                                          ----------->GT1                          <---------AHL20(2)         <---------ANAC55(2)          <---------ARR14(2)         --------->ANAC55(2)          --------->ARR14(2)         <---------ANAC46<---------AHL20(1)         <---------ANAC55(1)     <----------DOF2                                           <---------CCA1(2)         <---------ANAC58--------->AHL20(1)            --------------->AGL15 <---------ANAC58       <         <---------ANAC58<---------AHL20(2)           <-----------------AGL1 <---------ANAC58     ---    <---------ICU4       --------->AHL20(2)   --------->MYB52(2)      <---------TOE2(3)    --------->GLK1(1)   actgaagcattacgtctgattcagaaatttattagctttggatttggttatttgtttcatgaattgggaactagggtttgcttctattttcgcatttctc  13823900                     <---------WRKY18(1)                     <-----------GT1          --------->AGP1         <---------At4g35610                                                                        <         --------->At4g35610          <---------ZAT14                                             ---      <---------At5g28300<---------SPL7                   <---------At4g35610               ---------   <-----------HVH21----------->HVH21 --------->ZAT14     --------->At4g35610  <---------AtLEC2  <--- ---------ZAT2      --------->WRKY38(1)              --------->DAG2     <----------DOF2 ----------->GT1 --->ZmHOX2a(1)  <----------DOF2   <---------ANAC46 ---------->DOF2 ---------->ID1    <-----------RAV1(2)   ctagctgttacagctctagcttttgaccgtatgcattcagtgtaatgaaatcgaaaaagctgctgattttgttcctttgttgaatggaacaggttatttg  13824000                 --------->YAB1                <---------YAB1  <---------ARR11(3)                <---------------AGL15       ------>ZmHOX2a(2)        --------->ARR11(3)      <------ZmHOX2a(2)    --------->DAG2                      <----------DOF2      --------->CCA1(2)   ---------->DOF2                     <---------ANAC58     --------->ARR11(3)----------->GT1                        <---------ANAC58     <---------ARR11(3)--------->YAB1                     <----------DOF2     --------->AGP1 --------->YAB1                <-----------GT1 ---------WOX13(1) <---------YAB1 ------>ZmHOX2a(2)   <----------DOF2                       <-------- ------>ATHB12  --------------->AGL15           <---------GLK1(1)                           <-------- >MYB52(2)     <-----------------AGL3          --------->ARR14(2)                       <---------CCA1(2) ------YAB1    <-----------------AGL1          <---------ARR14(2)                    <---------YAB1   tgattgagatctagtcttcttataatggtaaagtgatcttcttactatggatttgcctttctttgctttgtgcttccattgtaaatgcttatagcttttt  13824100  Previous    Next  AGI:  At4g27680.1    Description:  MSP1 protein, putative / intramitochondrial sorting protein, putative. similar to MSP1 protein, putative / intramitochondrial sorting protein, putative [Arabidopsis thaliana] (TAIR:AT5G53540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48603.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 13821112    to: 13823348    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g27690.1    Description:  vacuolar protein sorting-associated protein 26, putative / VPS26, putative. Identical to Vacuolar protein sorting-associated protein 26 [Arabidopsis Thaliana] (GB:Q9T091;GB:Q8L3V2); similar to vacuolar protein sorting-associated protein 26, putative / VPS26, putative [Arabidopsis thaliana] (TAIR:AT5G53530.1); similar to unknown [Populus trichocarpa] (GB:ABK94113.1); contains InterPro domain Vacuolar protein sorting-associated protein 26; (InterPro:IPR005377); contains InterPro domain Immunoglobulin E-set (InterPro:IPR014756) Range:  from: 13823602    to: 13826401    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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