Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------------AtSPL8                           --------------->AtSPL8                                    --------->AHL20(2)                      --------->YAB1                                           <------MYB46(1)                      <---------ICU4                                           <------MYB83                      <--------ATHB1                                           ----------->GT1                      --------->ATHB51                                       <---------WOX13(1)                      -------->HAHB4                                 <---------AHL20(2)                     --------->ICU4                                 <---------AHL20(2)                     <---------ATHB51                               --------->AHL20(2)                     <---------YAB1                                <---------AHL20(2)<---------AHL20(2)                   --------->YAB1                      <---------bZIP60(1) --------->ATHB12                  <---------AHL20(2)   --------->AHL20(2)         --------->YAB1    --------->AHL20(2) ------GLK1(2)   --------->AHL20(2)--------->AHL20(2)  --------->bZIP60(1)<---------YAB1 --------->AHL20(2)   aattgttcaagtcgttttatataataattgttgtacataaattatacaaatagcatgacatgactctatattaattttgattggtataaaattatacaaa  13820700                              <------ZmHOX2a(2)        <---------DAG2                     --------->LBD16                   <----------DOF2       <------MYB83                    --------->ANAC58             ---------->DOF2             <------MYB46(1)    -----                    --------->ANAC58          ------>ZmHOX2a(2)          --------->ARR11(1)   <------                    --------->ANAC46       --------->YAB1         <---------ANAC46<---------HSFB2a(2)                   <---------LBD16        <---------ATHB12      <---------ANAC46  --------->HSFB2a(2)   atttaagctctaatctattaatccgcaatccgatcaaatgttcaatgatccaaaagactttatgttttgtgtatagatttggttttagaaacattgaatg  13820800                                      <---------At4g35610                         <---------At4g35610                                      --------->At4g35610                       --------->ZAT14                                    <-----------RAV1(2)                         <---------ZAT14                                   <------ZmHOX2a(2)                 --------->ANAC58                            --------->YAB1                           --------->ANAC58   <-----------GT1       --------->HSFB2a(2)                         --------->ANAC46               < <-----------GT1       --------->At4g35610                 <----------ID1 <---------ALFIN1        --- ---->ATHB12      --------->DAG2  --------->ARR11(3)       ----------->GT1--------->ANAC58       <--- ---WOX13(1)    ---------->DOF2   <---------ARR11(3)     ---------->DOF2  --------->ANAC58       ----   atttttctctatattttcaaaaggctgctagaataagatcagatgatgtaatagactaaaaaagaaaaaacaagacacacattgaactgatataagatga  13820900                                      --------------->AtSPL8                                   <---------SPL7                                  --------->DEAR3(1)                                 <------NtERF2                  --------->GLK1(2)                              --------->SPL7                   --------->KAN4(2)                     --------->ARR11(3)                       <---------HSFB2a(1)                     --------->GLK1(2)--------->ZAT6          <---------KAN4(1)                     <---------ARR11(3)                       --------->HSFB2a(1)         --------->YAB1     --------->ZAT18 <----------DOF2   --------->KAN4(1) ---------YAB1  ------>MYB46(1) ------>NtERF2                 <---------HSFC1(2) ------>YAB1    ------>MYB83<---------ZAT18 --------->TOE2(3) --------->HSFC1(2) ------YAB1   --------->TOE1(2)<---------DEAR3(1)        <---------HSFB2a(2) ----->ICU4   <---------MYB59 --------->ATERF1(1)        --------->HSFB2a(2)        ---------->DOF2   tgatgatgcaatagtacctacaaaatctagtggacgccgaacagtactttaattcggttttagaacattctgaattgaaggcctattaaaggcccttctt  13821000                                   <---------TOE1(3)                                   <---------TOE2(3)                               --------->At4g35610                            --------->ABI4(2)                            <---------ZAT14                            --------->ZAT14                                                         -                           --------->ALFIN1                                                         -                  <---------SPL7<---------MYB52(2)                     --------->ARR14(2)       -----              --------->ANAC58 <---------At4g35610                     <---------ARR11(3)      ------              --------->ANAC58 <---------ZAT2                  <----------DOF2                 <-----              --------->ANAC46 --------->ZAT2           <---------GLK1(2)------>ZmHOX2a(2)    -------          <-----------GT1<---------DEAR3(2)            --------->At4g35610           <---------HSFC1(1)       ----------->GT1  <---------DEAR3(1)             <---------At4g35610           --------->HSFB2a(2)   --------->GLK1(2) ----------->HVH21        <---------MYB52(1)    ------>ZmHOX2a(1)<---------HSFB2a(2)   gacacaatctagttacacgacttacgacggtgcagctaaggctatttcggtaatttcagcttctcctttcctcgatctccaagtattcgagaaaccccca  13821100                                                                             --------->HSFB2a(2)                                                                    <----------DOF2                                              <---------ANAC58      <---------DAG2                                              <---------ANAC58    ------>ZmHOX2a(1)                                           <-----------GT1    --------->ARR14(2)            <--------     ---------->DOF2                ------>MYB83              <---------ARR14(2)            <-------- -------->ANAC58                  ------->GAMYB              <---------CCA1(2)            --------->ARR11(3) -------->ANAC58   <---------SPL7 <---------MYB59            --------->GLK1(1)            <---------AHL20(2) ->NtERF2        --------->ATERF1(1)------>MYB46(1)          <---------GLK1(1)      --------->TOE2(3) --->ANAC46    <---------ETT(2) --------->ANAC58      <---------At4g35610  <---------At4g35610 ----ALFIN1 *TSS <------NtERF2--------->MYB46(3)      --------->At4g35610  ----------->RAV1(2) -->MYB46(3)<-----------RAV1(1) --------->ANAC58   <---------At4g35610     --------->At4g35610   ccaaggcaaaagctctgtcgtcgtccacaagaacaaccaaatttgtttccgtcttctgctaacatatcctctttttcatctgggaaccctaatttcttga  13821200                                                                                         <---------AGP1                                                                                         --------->ARR11(3)                                                                                <------NtERF2                                                                         <---------ARR14(2)                                                                         --------->ARR14(2)                                                                       <---------HSFC1(2)<---------ARR14(3)                                                                       --------->HSFB2a(1) ------>ZmHOX2a(2)                                                                       <------MYB46(1)   --------->ARR14(3)                                                                       <---------HSFB2a(1)<------ZmHOX2a(2)                           <---------GLK1(2)                           <---------MYB46(3)<---------ARR14(2)                           --------->ARR11(3)                          <------MYB83  ---------->DOF2                           <---------ARR11(3)                          --------->HSFC1(2)<---------ARR11(3)                           --------->ARR14(2)          --------->HSFB2a(2) --------->MYB52(2) -ANAC58                   <---------ARR14(2)          <---------HSFB2a(2)<-------TEIL   --------->ARR14(2) -ANAC58        <-----------GT1             ----------->GT1     <---------O2  <---------DEAR3(1)   <-   ctaacttagggttttatttatccatttgagatactctgtaattgaaaggttgaatttttagaagagacatgggaggttcgtcggagacaaagatcttaca  13821300                    --------->ZAT18               <---------ANAC58                 --------->DEAR3(1)    <------MYB83                 <---------ANAC58      <------MYB46(1)     <-----------TGA1                 <---------ANAC46   <---------ANAC46       <-----------HVH21                <------NtERF2       <---------ANAC58 <-----------ARR10                ------>NtERF2   <---------At4g35610  <---------ARR14(2)              <---------DEAR3(1)--------->At4g35610--------->LBD16          --------->YAB1             <---------LBD16    <---------ZAT2    <---------ANAC58         <---------ATHB12    ------            --------->ANAC46    --------->ZAT2    <---------ANAC46   <------ZmHOX2a(2)      ---------        <----------DOF2    <----------DOF2       <---------LBD16    --------->ARR14(2) <---------HSFB2a(2)        <---------DAG2<---------At4g35610     <----------DOF2  --------->At4g35610     --------->HSFB2a(2) --------ARR11(3)<---------ANAC58   <---------ANAC58 --------->ARR14(2) ------>ZmHOX2a(1)  ----------   agaactcatactttacgcggcgagcgctgctttcagctgcttggttctctttgcgggtcttcgtcatctcgatcctaatcgtgaggcttctaaaaaagct  13821400                                                           <---------TOE1(1)                                                           <---------TOE2(1)                                                     <---------ATHB12                                                    ------>MYB83   --------->YAB1                                   ------>MYB46(1) --->ARR11(3)                                      --------->WOX13(1)                       <-------- >DAG2        <---------GLK1(1)       ------>ZmHOX2a(1)<---------------AGL15    <-----------GT1 ----- >DOF2        --------->GLK1(1)   <---------SPL7  --------->AtMYB61       <---------YAB1    ---------   ctcgagcataagaaggaaatctctaaacgtttgggtcgtcctcttgttcagaccaatccatacgaggtaatctactatgaattaagcatcttagaatcct  13821500         <---------At4g35610         --------->At4g35610       <--------P     <------MYB83     <---------MYB46(3)     <------MYB46(1)    --------->MYB55(2)    --------->MYB111(2)    --------->MYB111(1)    <---------AtMYB61    --------->MYB46(2)    <---------MYB46(3)   <--------P   <---------MYB55(1) <---------MYB46(3) -ARR14(2)  -------->P                                                       >>>>>>>>>CBP60g        - ->ZmHOX2a(1)----------->RAV1(2)                                    <---------YAB1    <----------DOF2 >ARR14(2)  --------->MYB52(1)                       <---------AtMYB61       >>>>>>>>>SARD1        <-   cactggttggtagctacctgagaatgcgatatgtggtttcgataaccaatttgtattggtctctctgtttaatattgaaatttggatacttttgagttcc  13821600  Previous    Next  AGI:  At4g27680.1    Description:  MSP1 protein, putative / intramitochondrial sorting protein, putative. similar to MSP1 protein, putative / intramitochondrial sorting protein, putative [Arabidopsis thaliana] (TAIR:AT5G53540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48603.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 13821112    to: 13823348    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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