Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------WOX13(1)                                   <---------ARR11(3)                                   <---------GLK1(2)                                  <---------RVE1(1)                                                <-                                 ----------->ARR10                                               <---                             <------ZmHOX2a(1)      --------->At4g35610                 --------->ICU4                          --------->At4g35610    ---------->DOF2                   --------->ANAC55(2)                    ---------->DOF2--------->ARR11(3)      <-------TEIL     --------->ICU4 --------->At4g35610   aaaacagaacattgtttcagttcaaagcagaggaagagattttcgattgacaaaagctgagttcataaaaacagagcaatgttttaagtaataagcagag  13819600                                                  ---------->DOF2                                              --------->MYB52(1)                                              ------->TEIL                                              --------->SPL7                                            <---------SPL7                                          <---------------AtSPL3                                          ------->TEIL                                            <--                                          --------------->AtSPL3                                  ---                                     <-------GAMYB====================bZIP_DOF             <---------                                     --------->At4g35610       <-------TEIL            <----------DOF2                                     =================================MYC_MYB       --------->ARR11(3)            <---------AHL20(2)      --------->MYB46(2)      <---------TGA1a         <---------ARR11(3)        <---------AHL20(2)        <---------MYB52(1)        ======================================bZIP_DOF --------REM1(1)             <---------MYB52(1)----------------->AGL1             <---------AtMYB61 ---ZmHOX2a(1)       --------->ZAT14--------->MYB52(2)      --------->TGA1a  <---------MYB46(3) <----   gatgtagtttttatttatacaagtgaagtccgtttagttagttgaacgtaccgaaaggagagacgtccatggttaagcgttgttgaggtcttttttcgac  13819700                                                                                                   --                                                                                       ------>ZmHOX2a(2)                                                                                      <----------TaMYB80                                                                                      <------ZmHOX2a(2)                                                                                      --------->HSFC1(2)                                                                                      <---------HSFC1(2)                                                                                      <---------HSFB2a(1)                                                                                      --------->HSFB2a(1)                                                                                     <---------ARR14(2)                                                                                     <---------ARR11(3)               <---------DAG2                                                        --------->ARR14(3)        <---------MYB46(3)                                                           --------->ARR11(3)    ==============================HOX2a_HOX2a                                        --------->ARR14(2)    ------>ZmHOX2a(2)                                                        --------->LBD16       --  <---------ARR11(3)                                                       <---------LBD16  <-------- -------ANAC55(2)                                                          ------>ZmHOX2a(2)--------- ------>ANAC55(2)  <-----------RAV1(1) --------->TOE2(3)                 --------->ARR14(2)<---------ANAC58 --GT1 <---------TOE1(2)   ------>ZmHOX2a(1)                             <---------ARR14(2)<---------ANAC46 -----ALFIN1   <----------DOF2      ----------->RAV1(1)                ----------->HVH21   <---------ANAC58   acttgatccttggttccctttttgttgtccttgctgaacaacatcaatggagttttctctctggtcttgagccctgatccggctagggatcttccgtggg  13819800                         <---------------------WRI1                     ------>NtERF2                    <---------ZAT18                  <---------At4g35610                                                       ---------                  --------->At4g35610                                                       ---------  --------->MYB52(1)--------->ZAT18                                                    --------->ZAT14 ------->ANAC58--------->ZAT14                                                         <---------ZAT14 ------->ANAC58<---------ZAT14                                             <---------At4g35610 -LBD16       <---------REM1(1)             --------->ALFIN1         --------->At4g35610    --------- >LBD16       --------->ALFIN1          <------ZmHOX2a(1)      ---------->DOF2        --------->ALFIN1   aacgaaaccgagaacggtgtagcggacttcgatgagacagaaggagatggagcaagaggtgaacatagagccgatgcagcaaatgagagtgtagaagcca  13819900                                                                             *TSS                                                                    <---------ARR11(3)                                                                    --------->ARR11(3)                                                                    --------->ARR14(2)                                                             <-------GAMYB  <---------YAB1                                           <---------HSFB2a(1)      --------->GLK1(2)                                  <---------YAB1            --------->MYB52(2)    <---------ANAC46              --------->ICU4   <---------AGP1   <---------ARR14(2) >ANAC58                     <---------ANAC46--------->GLK1(2)   <---------ANAC58 >ANAC46             --------->CCA1(1)     --------->HSFB2a(1)   <---------ANAC58 <---------HSFB2a(2) >ANAC58             --------->RVE1(1) ----------->GT1      <---------MYB46(3)<------------CBF    <--   tttgtttcgagtatgagccaaaaatatcgctgagtgaagattagaaaattctagttctgagtttgttgagtatctactacaattgtagaagtgagtgtat  13820000                                                                          --------->HSFB2a(2)                                                          --------->CCA1(2)                                                         <---------ARR11(3)                                                         --------->ARR11(3)                                                         <---------ARR14(2)                                         --------->ARR11(3)          <---------HSFB2a(1)          <------ZmHOX2a(1)            <---------AtMYB61 --------->ARR14(2)    <------MYB83                ---------->DOF2 <---------TOE1(3)    --------->HSFB2a(1)    <------MYB46(1)        ----------->HVH21    <---------TOE2(3)    --------->HSFC1(2) ---------TBP              <----------ID1<---------ARR11(3)          <---------HSFC1(2)   atatgtaggtgaggatgagaaggctctaagtgacaaaaggagaggtcttgaaggttgaagatttgatacgaagtttctcgactcgttttgttttctatct  13820100                                                                  <----------DOF2                                                          --------->MYB46(3)                                                          <---------HSFC1(2)                                  <---------ANAC46        --------->HSFC1(2)                             <---------ARR14(2)           --------->HSFB2a(1)                             --------->ARR14(2)       --------->LBD16                <---------ATHB12                          <---------ANAC58           --------->HSFB2a(2)           --------->WOX13(1)                   --------->TOE2(3)                 <---------HSFB2a(2)---------->ID1     <-----------GT1      <---------ANAC58          <---------LBD16    <-----------GT1       <-------   atctattttactatttgttaacctttgtgcgttttctcgtgttttctcatcttctcccgaaccatcttctttttttccttcttgccaatcagtgtttatt  13820200                                                                                  <---------ICU4                                                                <---------YAB1    --------->ATHB12                                               <---------------AGL15             --------->ICU4                                 ---------->DOF2     --------->YAB1              <---------YAB1  ----                         <----------ID1        --------------->AGL15  <----------ID1         --------                       --------->MYB52(1)     ----------------->AGL3  <---------ANAC55(2)    -------- --AHL20(2)--------->YAB1--------->ANAC46     <-----------------AGL2  <---------YAB1         <-------   tgtgatgaactaataaaaacaaaataaacgaaaaaaaaagactagatttctacaattagaaaaaccacgattacgaaaaaaccatgattagatgatatat  13820300                                                                      --------->ANAC46                                                                      --------->ANAC58                                                                      --------->ANAC58                                                                ------->GAMYB         --------->At4g35610                                                              --------->At4g35610     <---------At4g35610                                                          --------->ANAC58          --------->ZAT18          --------->AHL20(2)                              --------->ANAC58       <---------YAB1      --------->AHL20(2)                                  --------->ANAC46       <---------ANAC46 ------->GT1                                            ---------->DOF2       <---------MYB52(1) ->ARR11(3)             ---------->DOF2   ---------->DOF2--------->DAG2    <---------YAB1      <----- ->AHL20(1)   --------->AHL20(2) --------->YAB1   ----------->GT1     --------->bZIP60(2)      ------ --AHL20(1)--------->AHL20(2) <---------CCA1(2) ----------->GT1<---------MYB52(2)<---------ANAC55(1)   tgtttaaaaaaaataaaaaaatcgaagaaagcatatcatattgaaaaagagagagaaaaaaagcaactcaccaagtcaccattatgtgtgctaacttgca  13820400                                                                                            ---------                                                                                            ---------                                              --------->ANAC46                              ---------                                             <---------LBD16                                <--------                                         --------->ARR11(3)                                 ---------                                     <---------AHL20(1)                                     ---------                                     --------->AHL20(1)                                   <---------ALFIN1  --------->TOE1(2)                 --------->AHL20(2)                                    --------->REM1(1)  --------->TOE2(2)               --------->AHL20(2)                                  <---------At4g35610 ----HSFB2a(2)         --------->ANAC58  <---------ARR11(3)                           --------->At4g35610 --->HSFB2a(2)         --------->ANAC58 <---------CCA1(2)                      --------->YAB1  ------   gaaacatatgagaaatggaatgcccaagtaaactaaaaatatatatctacgggagaaattagaaaattttgtctagtttgatcatatcagctacacgtat  13820500  Previous    Next  AGI:  At4g27670.1    Description:  HSP21 (HEAT SHOCK PROTEIN 21). Identical to Small heat shock protein, chloroplast precursor (HSP21) [Arabidopsis Thaliana] (GB:P31170); similar to ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6) [Arabidopsis thaliana] (TAIR:AT4G25200.1); similar to chloroplast small heat shock protein [Senecio crataegifolius] (GB:ABD66589.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20 (InterPro:IPR002068) Range:  from: 13818876    to: 13819977    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version