Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->CCA1(2)                                             <---------ARR11(3)                                             <---------ARR14(2)                                             --------->ARR14(2)                                  ----                                             --------->ARR11(3)                                  ----                                             --------->AGP1                                      ----                                         --------->YAB1                                       <------                                 --------->LBD16                 --------->LBD16              -------                                --------->ANAC46              <---------At5g28300          --------->LBD16                               --------->DEAR3(1)            <---------ALFIN1        --------->At4g35610                        ---------->DOF2 --------->ICU4     <-----------HVH21         <---------At4g35610                  --------->ANAC58    --------->WOX13(1)   ------>ZmHOX2a(1)        ----------->HVH21                  --------->ANAC58 --------->ANAC46   <------MYB46(1)             <---------At4g35610                  --------->ANAC46 --------->ANAC58   <------MYB83   --------->ARR14(2)   <---------LBD16                 ------->TEIL --------->ANAC58====================HOX2a_HOX2a   --------->MYB46(3)               --------->ZAT14--------->ANAC58<------ZmHOX2a(2) --------->DEAR3(1)--------->At4g35610             --------------->AtSPL8--------->ANAC58  --------->MYB59 <---------ARR14(2)  <---------ANAC46   ccaaaacgaatggacaatgtactcaacaaagcacccccagcaattaagatccaatttggtccttcaccgcgaaaactctcaaaccgctgatgcctggaaa  13790500                                                         --------->TOE1(3)           --------->ZAT14                               --------->TOE2(3)           --------->REM1(2)                           ------>MYB46(1)        <---------ANAC46                               -------->P         --------->ANAC58 ----->ANAC46                                          ------>MYB83       --------->ANAC58 ----->ANAC58                                       --------->MYB46(3)  <------ZmHOX2a(1) ----->ANAC58                           <---------ARR11(3)        <---------ZAT14 ---ARR14(2)                            --------->ARR11(3)    --------->ZAT6 ----------->RAV1(1) -->ARR14(2)                 ----------->GT1     --------->YAB1   --------->ZAT14              ------   cgccatttcttcgtgtagtcattgtaagagaaggtcaaaaaatgtcttctatcatccaaccttaacactgaagaggaagccacagtctcaagtttagtaa  13790600                                                                                        --------->GLK1(2)                                                                                   ----------->GT1                                                                                 ---------->DOF2                                                                            ----------->RAV1(1)                                                                            ------->GAMYB          <----------DOF2                                                  <----------ID1 <---------ZAT14                                 --------->ANAC58          --------->MYB46(3) --------->ZAT14                                 --------->ANAC58          --------->ANAC46 --->MYB52(1)   --------->YAB1       ----------->GT1                    <---------WRKY38(1)   cagaacagaggcctttaatcgtaatcaaaccctatgcgaaggaaaaatggcaaacaattgaagaacacagaggctcaacgacaaaaagaaaatcggagaa  13790700                   <---------YAB1                                                                 <--                   ----------->GT1                                                        --------->LBD16                ----------->TGA1                    --------->TOE2(3)             --------->ARR14(2)             --------->DAG2                      <-----------GT1----------->GT1   <---------GLK1(2)            ---------->DOF2              ----------->GT1       <---------MYB46(3) <---------ARR14(2)<          --------->AtMYB61          <---------GLK1(1)         ----------->GT1  ----------->ARR10 <--       <----------ID1    ---------->DOF2----------->GT1  <---------LBD16 --------->ZAT14 --------->HSFB2a(2)     XXXXXXXXXXXXXXXXXXXX>MIR161.2   --------->GLK1(1)---------->CDC5    <---------ZAT14 <---------HSFB2a(2)   cgattcaaaacaccaaaagtgacgataaaaaggaaacagaaatcggaaaataaacctcatcgggatgggtaatactgcagggacgattctcccagaaatt  13790800                                                                          <---------YAB1                                                                       <---------YAB1                                                                     --------->YAB1                                                                    <---------YAB1                                                                  --------->YAB1                   <-         ----------->HVH21                               <---------HSFB2a(2)                     <--- <--------P               <---------ARR14(2)     ---------->DOF2  <---------ICU4          ----------- -------TOE2(3)   <------ZmHOX2a(2)         --------->DAG2       --------->ICU4      <---------HSFB2a(2) -------GAMYB   ------->GAMYB              ---------->DOF2       <---------ATHB51    --------->HSFB2a(2) -------TOE1(3)--------->MYB46(3)     <---------TOE2(3)  --------->HSFB2a(2)         <---------HSFC1(1)   agggttgctaagtgacaacgatcaagtagatcgagagactaatgaaaaagctaaagtttgtagaacaattatgataatcaatggtctctagaagggaaaa  13790900                                                                                                   <-                                                                                                   <-                                      <------NtERF2                                            ------                                     ------>NtERF2                                            -------                                    --------->DEAR3(1)                                       <-------                                    <---------ANAC46                                         --------                                   <------NtERF2                                            <--------                                   --------->ATERF1(1)                                     <------NtERF2                                   --------->RAP2.3(1)                                    ------>NtERF2    <---------HSFC1(2)             ------>NtERF2                  <---------HSFC1(2)      --------->LBD16    --------->At4g35610            --------->RRTF1(1)             --------->HSFC1(2)     ------->GAMYB    --------->HSFC1(2)            <---------ORA47(2)        <-------GAMYB                --------->ANAC46 --------------------WRI1         <---------ATERF1(1)       --------->At4g35610         <---------MYB55(2) -------ID1                       --------->DEAR3(1)       <---------MYB46(3)   <-----------GT1------ >GT1   -------->P      *TSS     <---------DEAR3(1)  ---------->DOF2   <----------DOF2  --------->MYB46(3)   cgaagaagcttaccaggctgttttagagagacagcgcggcgcagaaacaactactcaaaggccgttgaagcttctttttttttttcttcacccgccgtga  13791000                                                 --------->AHL20(2)                                                 <---------AHL20(1) --------ANAC58                              <---------RVE1(1) --------ANAC58                              <---------CCA1(1)                            --------->DAG2 --->REM1(2)             <---------ANAC46   --------->ARR11(3)                          ---------->DOF2 ---->HVH21         --------->YAB1 ----------->GT1                                <------NtERF2 ----HVH21         <---------YAB1  <---------ZAT6<---------AHL20(2)              --------->LBD16 ->LBD16    --------->TOE2(3)<---------------AtSPL8                              ----------->GT1   -- -ANAC46  --------->ARR11(3) <---------------AtSPL3          <---------GLK1(2)  <---------ANAC46   -- ---->DOF2<---------ARR11(3)<---------ZAT14 <---------ARR11(3)                 <---------LBD16     <-   agcgtcccaaattatcttattttcatagtgtatagtactgttactagatattttatttctcaagaatgtcgaatcgaaattggcggaaaaaaaaggcgaa  13791100                                                                  <---------YAB1                                       <---------WOX13(1)         --------->ICU4                  <-- ------->AHL20(1)                    --------->ATHB12           --------->YAB1        --------->MYB52(1) ------->AHL20(2)                   <---------YAB1      <--------ATHB1             --------->ANAC58 --------AHL20(2)                <----------DOF2        <---------ICU4             --------->ANAC58   ataaaataatgtggaatcgagattactacttaggccttttgattgatattaaactgaataattccttcatgattttgtataatgtaagtaacagttgatt  13791200                                                                                                  ---                                                                                                 ----                                                                                              <------NtERF2                                                                                              -------                                                                                             <-------                                                                                             ------>NtERF2                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                      <---------ICU4                        <--------                             <---------TOE2(3)       <---------YAB1                         <--------                       --------->ICU4                --------->ICU4                   --------->ATHB12                       <---------YAB1             =============================HOX2a_HOX2a  <--------                     --------->MYB52(1)         <------ZmHOX2a(1)       <------ZmHOX2a(1)  <---------LBD16                 --------->DAG2           <---------YAB1         --------->MYB52(1) <----------DOF2                ---------->DOF2          --------->AHL20(2)<----------ID1  <-------TEIL    --------->RAP2.6(3) ---------GT1--------->AHL20(2) --------->CCA1(2) <------ZmHOX2a(2) --------->TOE1(2)<---------YAB1   taacctatttcacaaataaaaagtaacgattaagaaatgagattaatataggatcaagattacgacaaaacgaaggatacatttctctttattggcggca  13791300 -------->HVH21 ----->At5g28300 -->ATERF1(1) --RAP2.3(1) --ERF1 -ATERF1(2) >ATERF1(2)                                                                  <---------ZAT14 -RAP2.6(2)                                                                  --------->ZAT18 -DEAR3(1)      ----------->HVH21                                            <---------ZAT18   <----- -RAP2.3(2)   --------->At4g35610           ----------->GT1                  --------->ZAT14   <----- -RAP2.3(3)   <---------At4g35610    ------>ZmHOX2a(1)            <---------ZAT18        ----------->GT1   gtgactcttggtgatcagatgacagaggttatctcattcctagagaatgtaaatttgttctcaacctatgcactactactgcactaagaagttgtaaatt  13791400  Previous    Next  AGI:  At4g27620.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27610.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27610.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27610.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO62123.1) Range:  from: 13788867    to: 13790924    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version