Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->ATHB51                                                                          <--------HAHB4                                                                          -------->ATHB1                                                                          <---------ICU4                                                                          --------->ATHB12                                                                      <------ZmHOX2a(1)                                                                <---------ZAT2                                                                --------->At4g35610                                                                <---------At4g35610                                                                --------->ZAT2   <------ZmHOX2a(1)          <------NtERF2                    ----------->RAV1(1) ------>YAB1              <---------WRKY18(1)                --------->At4g35610     ------->TEIL ------YAB1            <---------ANAC58              <-----------RAV1(2) --------->ICU4 -->AHL20(2)           <---------ANAC46              ======================RAV  <---------AtLEC2 ---AHL20(2)           <---------ANAC58         <---------CCA1(2)  --------->At4g35610    -----------   ttataggaaacaaaaactcaccatggcttggccgagacccaaaacatcccatctctcaggcgaagcagcagaggaattattagcatggacttgtatgaat  13784700                                                                                 ------>MYB46(1)                                                                               --------->AtMYB61                                                                             ------>NtERF2                                                                            --------->DEAR3(1)                                                                          --------->LBD16                                                                          ------>NtERF2                                                                          <---------ATERF1(1)                                                                         --------->ANAC58                                                                         --------->ANAC58                                                                         --------->DEAR3(1)                                                                         --------->ANAC46                                                                        <------NtERF2                                                                        --------->ATERF1(1)                                                                        --------->RAP2.3(1)                                                                        --------->ERF1                                                                       <---------ATERF1(1)                                                                       ------>NtERF2                                                                       <---------RAP2.3(1)                                                                      --------->ARR14(2)                                                                      <---------ARR14(2)                                                                     --------->ZAT2                                                                   --------->DEAR3(1)                                                                   <-------PIF5--------->MYB46(3)                                     <-----------GT1               ------->PIF5<---------ALFIN1                                  <---------GLK1(1)             <---------ALFIN1 ------>MYB83     <--                             <---------LBD16                   --------->At4g35610                <--                            ------>ZmHOX2a(1)                  <---------At4g35610   ------>ZmHOX2a(1)                        --------->ARR14(2)        <---------ARR11(3)<---------ATERF1(1)  --------->ANAC46 ---------->WRI1        <---------ARR14(2)       <---------CCA1(2)--------->DEAR4(2)--------->TOE1(2)   tcatcgtcgtcttcgtcttcatttccaatcctctggatttcaccttcatccatatcatccaattcagcaccggctccgccaccaatcctacaaaccaatt  13784800                                      --------->HSFC1(2)                                      --------->At4g35610                                      <---------HSFB2a(1)                                      --------->HSFB2a(1)            --------->AtLEC2          --------->ZAT2               <-------TEIL        ------>NtERF2                 <---------HSFC1(2)    <---------ARR14(2)      <---------ANAC58        --------->LBD16             <---------GLK1(2)    <------NtERF2              <---------ANAC58       --------->ANAC46            ---------->DOF2      <------NtERF2    <---------HSFB2a(1)      <---------LBD16            --------->HSFB2a(2)    <---------LBD16  --------->HSFB2a(1)       -- <---------ARR14(2)              <---------HSFB2a(2)  --------->ALFIN1  --------->DAG2      --------- --------->ARR14(2)             <---------LBD16      <-----------HVH21<---------MYB52(1) <----------- -------ANAC58          ------>ZmHOX2a(1)    ---------->DOF2--------->ARR14(2)      <---------ANAC46 -------ANAC58         --------->TOE2(3)   --------->LBD16  --------->GLK1(2)  <----------DOF2  -----   gcctattctccgccatggaaacaatcctcaagttcccagaagctccgaaaaacgaggtcgcggttctggttcgtaaggttcctttggggtgatataaaga  13784900                               <---------YAB1                             --------->ATHB12                             --------->ATHB51                             <---------ICU4             ----------->GT1                             <--------HAHB4            ------------------------>ANAC81                            --------->ICU4            ----------->GT1           <------ZmHOX2a(1)                            <---------YAB1       <------NtERF2                 <------MYB83 -------->DOF2        <------ZmHOX2a(1)         --------->LBD16                <------MYB46(1) ->DOF2            <------ZmHOX2a(1)           <---------ANAC46               --------->MYB59 ----AGL15       --------->ALFIN1             <---------LBD16            <------NtERF2        ------- ------>GT1     <------ZmHOX2a(1)       --------->At5g28300   ---------->DOF2<--------P      <------ZmHOX2a(1)   gtaaagacgggagagagaggaggaggaagcattattagaagcggtaatggcggagagagtgaaaaaaagagaggcagaggtaggaattggagagaggagg  13785000                                          <---------At4g35610                      --------->ANAC58  --------->ANAC58                        --------->At4g35610        <------ZmHOX2a(1)            ---  --------->ANAC58                     ---------->DOF2     ---------->DOF2         --------->ANAC58<-  --------->ANAC46              <---------AtLEC2         --------->YAB1   --------->ANAC58       ---- -->ALFIN1                  <----------DOF2            --------->AtLEC2   --------->ANAC58   --------   gagaacgccatggaattagatagttttgctctttgaatgaagaaagctcacatctccattcaaaagcgagaggagcaaggaagaccagcaaaacccgaga  13785100                                                      --------->TOE2(3)                                                    --------->ARR11(3)                                                    <---------ARR11(3)                                                 --------->AHL20(2)                --------->DAG2                   <---------AHL20(2)    --------->At4g35610                      <---------AHL20(2)    <---------At4g35610                      --------->AHL20(2) ------>RAP2.6(3)                            <-----------TBP --------RAP2.6(2)*TSS   <----------DOF2   <-----------TBP   ----------->GT1       --------->AHL20(2) ----->CCA1(2) ---------->DOF2           <---------AHL20(2)  <---------YAB1        <---------AHL20(2) ->LBD16    <------ZmHOX2a(1)  <----------DOF2 ----------->TBP<------ZmHOX2a(1)  <-----------TBP   gacggcctctgagaggataaagtatgactttgactttatatgtttatttatataaatcttattaggataaaactctatttcttatttatattcaaaccca  13785200                                            --------->TOE2(3)                                            ----------->GT1                                          ------->TEIL                                          <---------ARR11(3)       <---------ANAC58                             --------->AHL20(1)                    <---------ANAC46                 <---------WOX13(1)      <---------CCA1(2)    <-----------RAV1(1)                <------------CBF      --------->ZAT6         ------->TEIL         --------->AHL20(2)               --------->ATHB12     <-----------GT1     <---------ICU4         <---------AHL20(2)               --------->ATHB51   <---------AHL20(2)   --------->ICU4         <---------AHL20(2)               <---------ICU4<---------AHL20(1)      --------->YAB1<---------ANAC58<---------AHL20(2)              --------->ICU4 --------->AHL20(2)    --------->AHL20(2)         --------->AHL20(2)              <---------YAB1 <---------AHL20(2)    --------->AHL20(1)      --------->YAB1            --------->YAB1  --------->AHL20(2)    --------->YAB1   <---------ANAC55(1)          <----   aaatttcagaataagcataattgctaacaattttattttaactgtatcttaaaaataataatgtatgttgcgtctatttataaatttaaaatttgtttat  13785300                                                                                          --------->LBD16                                                                                         <---------ANAC46                                                                                         <---------ANAC55(2)                                                                                        <---------LBD16                                                                    <---------ICU4 <---------------AGL15                                                                    --------->ATHB51--------->WOX13(1)                                                            <-------GAMYB          --------------->AGL15                                                          <---------ANAC58        ----------------->AG                                                          <---------ANAC46        ----------------->AGL1                                                          <---------ANAC58      <-----------GT1                                                         <------NtERF2       --------->MYB52(2)                                                     --------->ANAC46        --------->MYB111(1)                --------->AHL20(2)                   <---------ANAC58        --------->MYB59  -------      --------->ATHB12                          ------>ZmHOX2a(1)   -------->HAHB4----------------->AGL3     <---------YAB1                            --------->TOE2(3)   --------->ICU4 <-----------------AGL2   <-----------GT1                    --------->ZAT18--------->ANAC55(2)     --------->MYB46(2)  ----   --------->YAB1<---------YAB1       --------->ZAT14<---------ANAC58      <--------P  --------->MYB52(1) -------GT1 <---------ZAT6            <---------ZAT18<---------O2  <---------YAB1 <-----------------AGL1   actatttatcatttgtgttaaaattggctaattcttctagtgaacacatccttatacgtggcgtttgtaattatcgggttagttaccaattacggagaat  13785400                                                                     ------>MYB46(1)                                                                     ------>MYB83                  --                               --------->At5g28300                --------->ANAC46              <----                              ----------->GT1               <----------DOF2                   -------                            <---------LBD16                --------->TOE2(3)                  -------          --------->DAG2    --------->LBD16                --------->TOE1(3)                --------- ---->GT1---------->DOF2   --------->ANAC46             <-----------GT1                   --------->GLK1(2) ----->AHL20(2)           <---------LBD16   --------->MYB46(3)  --------->ANAC46    --------->MYB52(1)   aaaaaaaaaaaaaaagtagagagctattcccgcggtaaattcttcaacaactatctatttacctttacaccaaatgttgaaagaaaaaacagaatcaaga  13785500                                                                                                 ----                                                                                             --------                                     --------->GLK1(2)                                   <----------ID1                                     <---------ARR11(3)                                 ----------->GT1                                     <---------ARR14(2)                          <-----------------AGL1                             ------->TEIL    ------>ZmHOX2a(2)                   --------->HSFC1(1)         ---------->DOF2     --------->GLK1(2)                                   --------->HSFB2a(2)       --------->ANAC58     --------->ARR11(3)       <---------MYB52(1)          --------------->AGL15 ------->AtLEC2   --------->ANAC58   <---------ARR14(3)                          <---------------AGL15 -----ARR11(3)    --------->ANAC58   --------->ARR11(3)                          <---------HSFC1(1) -->ANAC58      ---------->DOF2      --------->ARR14(3)  --------------->AtSPL8  <---------HSFB2a(2)- -->ANAC58  --------->At4g35610--------->TOE1(3)<---------ALFIN1         <-------TEIL  --------->DAG2 >YAB1 --------->ANAC58 ---------->DOF2    <---------ARR11(3)        <---------TOE2(3)---------->DOF2   cattcaaaaacgaaagcagaaagccagaaagaacctgaaaatcttgatctccaccgttcttagtacatactaagattcattttctcgaaaaaggaaaaag  13785600  Previous    Next  AGI:  At4g27600.1    Description:  pfkB-type carbohydrate kinase family protein. similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT1G19600.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82032.1); contains InterPro domain Carbohydrate/purine kinase (InterPro:IPR011611); contains InterPro domain Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); contains InterPro domain Ribokinase; (InterPro:IPR002139) Range:  from: 13782521    to: 13785118    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g27610.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27620.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62123.1) Range:  from: 13785438    to: 13788356    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version