Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    ------>NtERF2                                                 >>>>>>>>>AtERF-4                                                 >>>>>>>>>AtERF-3                                               <---------At4g35610                                               --------->ZAT2                                               <---------ZAT2                                               --------->At4g35610                <----------DOF2                                      ----------->HVH21                       <---------ANAC58      -                                    <---------ANAC58                          <---------ANAC58     <- ------->GAMYB                      <---------ANAC46                    --------->ATHB12           <- -------->MYB46(3)                  <---------ANAC58                   <---------YAB1              -- ---------GT1            --------->GLK1(1)<---------At4g35610      <---------GLK1(2)       <---------GLK1(2)   caaccgctctgaatttctcaatctcagaactcttctctgcgtgatgctgagctgccaatgcctctctcagtttctcattggcttctttagtcagtttctc  13776100          <------ZmHOX2a(2)      <----------DOF2         --------->ARR11(3)   <---------ARR11(3)                            ------>ZmHOX2a(1)         <---------ARR11(3)  <XXXXXXXXXXXXXXXXXXXXMIR390A/B         ------>ZmHOX2a(1)   <----------DOF2         <---------DAG2                          --------->TOE1(3) -------->GLK1(2)          <----------DOF2                         --------->TOE2(3) --------ARR14(2)    <----------DOF2                           <----------DOF2        <-------GAMYB --------GLK1(2)  <---------ARR11(3)<---------ANAC58          <---------ANAC58       --------->MYB52(2) ------->ARR14(2) --------->ARR11(3)<---------ANAC58          <---------ANAC58       <---------MYB46(3)   agattctttaagatcatcaagagctttagctttatctttcttgagcctttctatttgctcattagctttccttaaatcctcttgagtttgttgaaccagt  13776200                                                                                             --------                                                                                            ------->MYC2                                                                                            <-------MYC2                                                                                            <-------MYC3                                                                                           --------->ANAC46                             <---------GLK1(1)                                             --------->O2                     --------->ATHB12                     --------->ANAC58                 --------->ANAC55(2)                  ------->GAMYB                           --------->ANAC58                 <---------TGA1a               --------->MYB52(1)                   --------->ICU4                         <---------ANAC55(2)              ----------->HVH21                     <---------YAB1                         --------->TGA1a            --------->HSFB2a(2)                   --------->YAB1                    --------->YAB1     <---------ZAT18<---------YAB1               --------->ICU4              ----------->GT1------->MYC3    --------->ARR14(2) <---------WOX13(1)        <---------ATHB12       ---------->DOF2    <---------O2   --------->ZAT2<------------AtMYB77      --------->AtLEC2             =============================bZIP_DOF   agcccagttcccttccctaaccgtgattgcgatttctgaaatgccatacaaatgatgatcaagaaatagtctttcaaagttgaaaatcaaaacacgtgaa  13776300                                                                                                    <                                                                                                    -                                                                                                   --                                                <---------GLK1(1)                                  <-                                                --------->GLK1(1)            <---------ANAC58      <-                                        =================================HOX2a_HOX2a               <-                                     <------ZmHOX2a(1)                       <---------ANAC58     ---                                  <-----------RAV1(2)              --------->YAB1                ----                           <---------ANAC58   <------ZmHOX2a(1)   <------ZmHOX2a(2)             -----                           <---------ANAC58   ===========================HOX2a_HOX2a           <-----      --------->ATHB12   <-----------GT1<------ZmHOX2a(1)  --------->SPL7    <---------ANAC46 <------ --->HVH21          ----------->GT1  ====================================HOX2a_HOX2a  --------->MYB52(1)   gcatcaagttattggatggagatggttttacttgcctcaggaggagtaggaactcttgcagtccgacgatcagaaacaggcttggagttaacagtttgcg  13776400                                                                                                    < ---------DOF5.7(2)                                                                            ------ -------->MYB52(1)                                                                            ------- ------->ZAT14                  --------->LBD16                                               ------- --------WRKY38(1)            <---------LBD16                       <------MYB83            <-------- --------ZAT14              <---------ALFIN1                        <------MYB46(1)      <------MYB46(1) --------WRKY12            <---------ZAT14                          <---------MYB46(3)   <---------MYB46(3) -------->HVH21       <---------ZAT18                              <---------AtMYB61     <------MYB83 ----->At5g28300      <---------ZAT14                             <---------MYB52(1)    <---------MYB46(3) ---->LBD16           --------->ZAT14                 --------->ARR14(2)                <---------AtMYB61 ----ANAC46           --------->ZAT18   <---------ANAC46        <-----------RAV1(1)    <--------P<--- ---LBD16   ---------->DOF2--------->ZAT14            <---------ARR14(2)             <-----------RAV1(1)   gtgaacggtctattgaaagacgagtgctctgcaccggagatggcgaattgccatcggatttagtcactgttggtttactcactcttggtgttggtggtga  13776500       <---------TOE1(1)       <---------TOE2(1) ---------MYB52(1)                --------->REM1(1) ------>AtMYB77                   --------->ANAC46    ------------>CBF             ---------->DOF2 ---->HVH21                  --------->AGP1  ----------->GT1         <-----------GT1 ---->TGA1             <-----------GT1     ---------->DOF2    ------------>CBF --------->ZAT6 -MYB46(3) <------ZmHOX2a(1) --------->ARR14(2)      --------->TOE2(3)        ------------>CBF ------ANAC46         ---------->DOF2  --------->At4g35610   <-----------GT1 <-----------GT1  -------   cggtttgctacgaggagtctccattaaaccagttctacatcatcagaaagataaaccacaatgtcacaatctcaccatttaacaataaagaaaacaaaac  13776600                                                                <------ZmHOX2a(2)                   <                                                               --------->ARR14(2)              <-----                                                               <---------ARR11(3)              ------                                                               <---------ARR14(2)       --------->YAB1                                                              <------ZmHOX2a(1)      --------->WOX13(1)                                                              ============================HOX2a_HOX2a                                                        ===============HOX2a_HOX2a  ------>ZmHOX2a(2)                                                        <------ZmHOX2a(1)         >>>>>>>>>GATA-1   <                                                   <---------ZAT2                 >>>>>>>>>GATA-2  <-                                         --------->ATHB12     =============================HOX2a_HOX2a          --------->At4g35610            <---------ICU4 ================HOX2a_HOX2a<------ZmHOX2a(2)-        <---------ICU4                  --------->ICU4  ===================================HOX2a_HOX2a     --------->WOX13(1)                 <---------YAB1  ==================================HOX2a_HOX2a    --------->MYB46(3)                --------->YAB1--------->TOE1(2)             >>>>>>>>>GATA-4  --   ------>MYB46(1)                   <-------TEIL --------->ANAC58                >>>>>>>>>GATA-3  --   ------>MYB83              --------->ATHB12     --------->ANAC58                <---------ARR11(3)< --------->AtMYB61         --------->GLK1(2)  --------->ANAC55(2)                 --------->AGP1   <- -->MYB52(1)              <---------GLK1(2)   <---------ANAC55(2)------>ZmHOX2a(2)--------->ARR11(3)-   agaccatccatcatctccattcttcttagaatctttggattcatgattaagtaagctaggaacaggatcccatctcagtctagagatctatcaaattatc  13776700     <---------TOE2(3) --------ATHB1 ----YAB1                   --------->ANAC46 ------>CBF               <---------ALFIN1                                                   -------- ---------ICU4           --------->ZAT18            <---------ICU4                    <---------MYB52(1) --------ATHB12          <---------ZAT18         --------->YAB1                      --------->LBD16 -------->ATHB51         <-------TEIL            <---------ICU4                      <-------GAMYB ------->AHL20(2)    <---------------AtSPL8      -------->ATHB1                     <---------ANAC46 ------->ICU4        --------->MYB59  --------->ARR14(2)                            ----------->GT1 --------HAHB4       --------------->AtSPL8      --------->ATHB12               --------->GLK1(1) --------ATHB51      <---------TOE2(3)------->TEIL<------------CBF              <---------GLK1(1) -------->YAB1       --------------->AtSPL3     <---------YAB1          <------------CBF ---------->DOF2   aataattaagatgaataaacatttaggtacacttcaactgtatccaaaaaatcattgttacatagtacatggactattggagaattccgttaaaagtgtt  13776800                                                                             ------>ZmHOX2a(2)                                                                            <------ZmHOX2a(2)                                                                            --------->CCA1(2)                                                                           --------->ARR14(2)                                                                           <---------ARR14(2)                                                                           <---------ARR11(3)                                                                           --------->ARR11(3)                                                                           <---------AGP1                                                                           --------->AGP1                                                                     <---------HSFB2a(2)                                                                     --------->HSFB2a(2)                                                                   --------->At4g35610                   --------->CCA1(2)                            --------->HSFC1(2)            --------->ANAC58                                    --------->HSFB2a(1)          --------            --------->ANAC58   <----------ID1          <---------ZAT14     <-----------ARR10 <-------       --------->ANAC46   <----------DOF2       --------->ANAC46<---------HSFB2a(1)       --------->HSFB2a(2) ->ALFIN1 --------->MYB52(1) ---------->DOF2 <---------REM1(2)  <---------HSFC1(2)       <---------LBD16   gggagtctcacaaaacggaagatagagactttaaagacaaataagtctacaagtgactacagaagaagcttctgcaagatctaaaccaatttgtggaacc  13776900                                                                        --------->LBD16                                         ------->GAMYB                 <---------HSFC1(1)                                         --------->AtMYB61             --------->HSFB2a(2)                                        --------->MYB46(3)        <---------ICU4                   --     ----------->GT1            <---------AHL20(2)                <--------ATHB1                -----    ----------->GT1            --------->AHL20(2)  --------->MYB52(1)  <---------HSFB2a(2)     ------ ->TCP20             ----------->GT1   --------->ANAC58<---------At4g35610                  <------ZmHOX2a(1) --ARR14(2)        ---------->DOF2     --------->ANAC58--------->At4g35610          --------->MYB52(1)   agaagcagggaaaatcagattaaaagtaacaaaattaatgcaaccaaaacaaaaaacagatgactgaataattccagaagaaaaaacaagggaaggagaa  13777000  Previous    Next  AGI:  At4g27595.1    Description:  protein transport protein-related. similar to hydrogen ion transmembrane transporter/ protein binding [Arabidopsis thaliana] (TAIR:AT1G65010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62148.1) Range:  from: 13772825    to: 13776524    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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