Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <-----------ARR10                             --------->GLK1(2)                             --------->ARR14(2)                      <------ZmHOX2a(2)                      <---------GLK1(1)                     --------->ARR11(3)                 <---------GLK1(2)                     <---------ARR11(3)              ------>ZmHOX2a(2)                    <---------GLK1(1)    <---------ALFIN1            <------ZmHOX2a(2)<---------ARR14(2)  <---------YAB1          ------->GAMYB------>ZmHOX2a(2)<---------ZAT18 <---------ARR14(2) ----->MYB52(1)     --------->GLK1(1)   --------->ZAT18 --------->ARR14(2) -->GT1--------->MYB52(1)   <---------GLK1(2) <----------DOF2                       <xxxxxxxxxxxxxxxxsmallRNA(s)   aacggaccataacgatcaagagagatctcagaatctccatcgtccactcttttgatcggattctttgtattacaagcgtcgtaatcagccttgttcacct  13751500                               <---------ARR11(3)                     <---------ANAC58    --------->GLK1(2)                           <---------TOE1(3)                     <---------ANAC58 --------->ANAC58                               <---------TOE2(3)                 <---------MYB52(1)   --------->ANAC58                              <---------DOF5.7(2)           --------->ZAT2      --------->ARR14(2)                       <-------TEIL--------->MYB52(1)           <---------At4g35610 <---------ARR14(2)                       --------->ZAT18           <---------ZAT2      --------->ARR11(3)                       --------->ZAT14           ---           --------->At4g35610 --------->GLK1(2)                        <---------ZAT14       -------       <-----------HVH21     ----------->ARR10                          <---------ZAT18    ----------    --------->DEAR3(1)   --------->At4g35610                       ---------->DOF2--------->DOF5.7(2)   ctagcaccgagtcagctcccttagcgtagctaaaatctgcaagaatcgaaattgagtttcagacaaaacaaaagtacactctaagttaacgaaatgacac  13751600                                                                                             ========                                                                                             --------                                                                                             <-------                                                                                           <---------At4g35610                                                                                           <---------ZAT2                                                        --------->MYB52(1)               <-----------RAV1(2)                                                       <---------ARR14(2)          <---------TOE1(2)                                                    --------->ANAC58           <-------TEIL--------->ZAT2                                                    --------->ANAC58         <---------ARR14(2)                                            <---------ANAC58                 --------->ARR14(2)    <--------P                              <---------ANAC46                 <---------GLK1(2) <----- ------>MYB52(1)                            <---------ANAC58               ----------->ARR10<-------- ---------->AGL1                         --------->ALFIN1        <-----------GT1   <---------TOE2(2) ->HVH21               <---------At4g35610 <-----------------------TaNAC69(2)--------->ARR11(1)<-----   aaacgggtaagagagtgagagagagagatgatatatacagagagtgtcgtgaacaaggaaacggtttttgccagaccaagattcgtagttttcaggtggg  13751700             <---------ALFIN1            <------NtERF2           ------>NtERF2          --------->ANAC58         ------->MYC3         ------->MYC2         ------->PIF5         <-------MYC2         <-------MYC3        <---------ALFIN1        --------->ANAC58        --------->ANAC58                 <-------GAMYB        --------->TGA1a----------->RAV1(1)        ----------->GT1        =========================================MYC_MYB        <---------TGA1a------>NtERF2    --------->MYB52(2)      <---------ALFIN1<---------ETT(1)  <---------ANAC58     ------->GAMYB    ----------->HVH21 <---------ANAC58  <-----------GT1   ------>NtERF2      --------->SPL7                                     ---------->DOF2 =================MYC_MYB            --------->LBD16                                   >>>>>>>>>TBF1 ->ALFIN1<-------PIF5 --------->ANAC46<---------MYB52(1)                        <------MYB46(1) -P  =============MYC_MYB           <---------ANAC58                            <------MYB83 -MYB46(1)--------->ANAC58          <---------ANAC46                         <------ZmHOX2a(1) -MYB52(1)--------->ANAC46          <---------ANAC55(1)                   <------ZmHOX2a(1)   ------- -MYB83 --------->ANAC46            <---------ANAC58          --------->ETT(2)  ----------->GT1     <   tttgtaacccacgcgccactgcctccgacattaaacttccgtgcgttggagatggtgaagagggtcgagagagagaggaggatggtgaagaagaaagaaa  13751800                     --------->ICU4        <---------ARR11(3)             ---------->DOF2               --------->ARR11(3)          <---------HSFB2a(2)              <---------GLK1(2)    <---------------AGL15         --------->TOE1(2)                --------->AHL20(2)    --------------->AGL15        --------->ZAT2                ----------->GT1                    <--   ----------------->AGL3        --------->At4g35610          --------->ARR11(3)        <---------YAB1 --->DOF2 --------->HSFB2a(2) ---------->DOF2           --------->CCA1(2)             --------->YAB1< ----------DOF2  --------->ARR11(3)       <---------RVE1(1)   <---------ARR11(3)  ----------->GT1 <--   ggcttttcatttttagaaaggtcatgtttttcaaaagctgcgagagattttcaacaagataagagatgtttatatagaaatgaagcgtttataatgggct  13751900                                                                        ------->TEIL                                                                       <---------GLK1(2)                           --------->ATHB12              <---------ANAC46             <----------DOF2                             <---------ANAC55(2)    ------->TEIL           *TSS            -------->HAHB4                <---------ANAC58       <---------ARR14(2) ---------->DOF2           --------->YAB1                --------->ANAC55(2)    --------->ARR14(2) -------TOE2(3)           <---------YAB1                 <---------ANAC58       <-----------ARR10 ------ZmHOX2a(1)      --------->ICU4                    <---------ANAC55(1)   <---------CCA1(2)   -- -------TOE1(3)     ---------->ID1          <-----------TBP        <------------CBF            ------   aaggaaagtgtgaagcttttttgtcttaatgatagagagaggtcgtttttatgggtaatacgtgttcgaaattgaatctctgtatctactcgttttcctc  13752000                                        <---------AHL20(2)                                  <---------O2                                  --------->O2                                  ============================bZIP_DOF                                  <---------TGA1a                          <---------At4g35610                          --------->At4g35610                         <-----------ARR10                         <---------ARR14(2)                         --------->ARR14(2)  --------->AHL20(2)                         <---------ARR11(1) <---------AHL20(2)                        <---------CCA1(2)   --------->AHL20(2)                 <----------DOF2  --------->TGA1a                 ===========================bZIP_DOF          --------->ARR14(3)      <---------ANAC46          <---------ARR14(3)     <------NtERF2                                               --------          --------->ARR14(2)   --------->DEAR3(1)                                     --------->LBD16          <---------ARR11(3)   ----------->HVH21                                     --------->LBD16          --------->ARR11(3)  --------->DEAR3(2)                                    --------->ANAC46          <---------ARR14(2) --------->At4g35610                                    --------->LBD16        ----------->ARR10------->TEIL   --------->AHL20(2)                          <---------LBD16   ---------->DOF2      <---------ARR14(1)  <---------AHL20(1)                     --------->LBD16   =========================================bZIP_DOF                               <---------LBD16 ------->TOE2(3)<---------ANAC58<---------RAP2.6(3)<----------DOF2                <---------LBD16 >ZmHOX2a(1)    <---------ANAC58------>NtERF2<---------AHL20(2)            ------->TEIL      --------   acattaaaagaagatattgcttcttcgtatctgccgacgtgtttaatttaattctttttgggatttgaagttatatgaatttatccccgggaaaaacgca  13752100                                                                                  --------->ARR11(3)                              --------->ARR14(2)                                  <---------ARR11(3)                <---------LBD16                                                  --------->GLK1(1)               <---------ANAC46                                          --------->DAG2            <-        <---------MYB52(1)    <---------ARR14(2)                   --------->MYB52(1)             <-- ->ANAC58 <------MYB83  <---------GLK1(2)--------->YAB1          <---------ARR14(2)               --- ->ANAC58 <------MYB46(1)--------->GLK1(2)            --------->AHL20(2)---------->DOF2    <---------   ttagagaacagttggttttgtggaaagaatcggattcaacgaatcatatgcttccattatatatgagaataccgaaaagtctgaaatcttgcatcaggtc  13752200                                                                                             <-------                                                                                             --------                                                                                          <---------ANAC55(2)                                                           --------->ICU4                 --------->ANAC55(2)         <-------TEIL                               <---------ARR14(2)                   <---------TOE2(2) --------ICU4                                       --------->ARR14(2)                   <---------TOE1(2) -------YAB1                           --------->DAG2 <---------ETT(2)                  ------>ZmHOX2a(1) ------>ICU4                          ---------->DOF2 --------->ETT(2)                 -------------- --RAV1(2)              --------->CCA1(2)        --------->YAB1            ----------->HVH21 ------->TEIL   ttaattgcaaattcattttccatttgatatgagaataccaaaaagcttcaaccatatcgacattagtacatattggtctgatggtctctcctacgtattt  13752300               <---------ZAT18         <-----------------------TaNAC69(2)     --------->ANAC58     --------->ANAC58                 <---------MYB46(3)   ---------->DOF2      ---------->DOF2 --------->ANAC46  <---------LBD16   --------->ALFIN1                    ----------->RAV1(1) --ARR14(2)   <---------ANAC58   <-----------RAV1(2)              <---------ALFIN1 ->ARR14(2)--------->TOE1(2)    <-------TEIL                  <-------TEIL ------->WRI1 <---------ANAC58<---------SPL7  --------->LBD16--------->CCA1(2)   tcgacgaaagaaacttgcgaactcggaagagcggtacaggtggtagtccgtagtctatagtagatacaacacttgcaacattttgaacatatgggctggg  13752400  Previous    Next  AGI:  At4g27520.1    Description:  plastocyanin-like domain-containing protein. Identical to Early nodulin-like protein 2 precursor [Arabidopsis Thaliana] (GB:Q9T076;GB:Q5PNT5;GB:Q8LBE5); similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G53870.1); similar to putative early nodulin-like 2 predicted GPI-anchored protein [Trifolium pratense] (GB:BAE71287.1); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) Range:  from: 13750446    to: 13751911    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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