Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        ----------->HVH21                                                                                     --------->LBD16                                                                                     <-----------HVH21                                                                           --------->ANAC46                                                                           --------->ANAC58                                                                           ------->GAMYB                                                                           --------->RAP2.6(2)                                                                           --------->TOE2(3)                                                                           --------->ANAC58                                                               <---------ICU4       --------->ANAC46  <---------MYB59                                             <---------YAB1  ---------->DOF2 ------>TEIL                   <---------WOX13(1)         <---------DAG2--------->ARR14(2) --------CCA1(2)            --------->ICU4                <----------DOF2<---------At5g28300 ----ANAC58       <---------GLK1(2) <-----------GT1     ------->TEIL    <---------ARR14(2) ----ANAC46  --------->At4g35610<---------AHL20(2)  --------------->AtSPL8--------->MYB46(3) ----ANAC58  <---------At4g35610--------->AHL20(2)<---------AHL20(2)    --------->MYB52(1)<---------ALFIN1   tgtatctaacatttcagctagattgttctactgattaatttctatctaacattttatgaactttatcatttcagtaaccgcaatgcccgtgaccactctg  13742700                                                                                                  ---                                          --------->YAB1                                      <------                                       <----------DOF2                                        -------                                     ------->TEIL                                            --------                                  --------->ANAC58                                           <-------                                  --------->ANAC55(1)                                        <-------                                  --------->ANAC58                                           --------                                  --------->ANAC46                                           <-------                                  <---------ANAC55(2)                                       ---------                                  --------->ANAC55(2)                                       <--------                                 --------------->AtSPL3                    --------->AHL20(2)--------                              --------->YAB1                 <---------AHL20(2)         ---------->DOF2          ------->TEIL       <---------ATHB12               <---------AHL20(2)        <---------ATHB12   ---------->DOF2         --------->WOX13(1)               --------->AHL20(2)  <-----------GT1 >>>>>   catataaaagtgtatgtcttcttcacattcaatcacacgtactttcaaaattctactaaaaattaaatgttttttttttatataactaatcaaagatatc  13742800                                                                   --------->At4g35610                                                                   <---------At4g35610                                                               <---------ARR11(3) ------->DOF2                                                  <-----------ARR10 ---ARR11(3)                                                   --------->ARR11(3) -->ARR11(3)                                                   <---------ARR14(2) ->GLK1(1)                                                     --------->ARR14(2) --GLK1(1)                                                    --------->CCA1(1) --CCA1(1)                                                    --------->RVE1(1) ->CCA1(1)                                                  --------->AHL20(2) --RVE1(1)             <---------MYB52(1)                   --------->YAB1          --------->AHL20(2) >ARR11(3)           <---------ANAC58                     --------->AHL20(2)        <---------AHL20(2) -ARR11(3)           <---------ANAC58                    --------->YAB1            --------->AHL20(2) ->RVE1(1)       --------->CCA1(2)                   --------->TOE1(3)     ------>ZmHOX2a(1) >>>>RAP2.2 ---------->DOF2      ----------->GT1     --------->TOE2(3)  ------>ZmHOX2a(1)   taaagtttttgagtcaaagttatgcgttactcaaatagaaaaaaacatttagaaacctaaaataatatctgctcctcctaaaacatttaataacattcaa  13742900                                                                          <------MYB46(1)                                                                          <------MYB83                   <---------AHL20(2)                                   <--------P               <---         --------->AHL20(2)    ---------->DOF2                       <---------TOE2(3)     <---------         --------->YAB1 <-----------GT1                            ---------->DOF2         ----------  --------->ANAC58 --------->AHL20(2)                    --------->MYB46(3)<------ZmHOX2a(1)    <----  --------->ANAC58--------->AHL20(2)  <---------MYB52(1)<---------------------WRI1  <---------YAB1<--   aaacaagtcaataaaaaaaaaaaaatttacgaataaagcccttaattagtcaaaaatgaacgaacaaaacaaaggtaggagaaagtatgaatggcccaat  13743000                                                         <---------ICU4                                                   <------MYB83                                                   ----------->GT1                                                   <------MYB46(1)                                                  --------->MYB46(2)                                             --------->LBD16  <---------YAB1                                            --------------->AGL15                   --------->YAB1                                           <---------LBD16  --------->YAB1       --------->YAB1                                           <-----------------AGL1           <---------AHL20(2)       <---------ZAT14     ----------->GT1 ========================================================== ------LBD16            --------->ARR14(2) <-----------------AG      <------ZmHOX2a(2) --------AGL1           --------->GLK1(2)  ----------------->AGL1   <---------ARR11(3) ------->AGL1           <---------ARR14(2)<---------At5g28300------------>CBF  <---------YAB1  ------ -----ATHB12       --------->AtLEC2      <-----------GT1--------->ICU4      <---------YAB1 <--------- -------LBD16   <-------TEIL      ------------>CBF--------->MYB59   --------->ARR11(3) ---------->DOF2   cggggagattgcagtagattcatacaaatctgtaaatacaattttaccgggtttggtaaaaatcacaatagatcattttttattaataagaaagagaaaa  13743100                                                      <---------At4g35610                                                      --------->At4g35610                      --------->ANAC46                <------ZmHOX2a(2)                      --------->ANAC58                --------->CCA1(2)                *TSS  --------->ANAC58               --------->ARR11(3)                --------->GLK1(1)                    --------->AGP1              <---------ANAC58                       <---------ARR14(2)              <---------ANAC58                       --------->ARR14(2)         <---------ANAC58                            <---------ARR11(3)               <---------ARR11(3)         <---------ANAC46             <---------AHL20(2)                              --------->ARR11(3)         <---------ANAC58            <---------AHL20(1)                              --------->RVE1(1)        <-------TEIL--------------->AGL15            <---------AGP1           --------->ANAC58      --------->ARR14(2)             --------->ARR11(3)                <---------ANAC58             < ===================================MADS_MADS       <---------GLK1(1)  <---------ANAC58          <--- ---->DOF2<---------LBD16            <---------ARR11(3) ----------->HVH21     --------->ANAC46   ---- -ID1 <---------ARR14(2)             --------->AHL20(1)------>ZmHOX2a(2)      --------->ANAC58   <---   agaatgcaaattcgtggggtttccaagaaatgcaagtgatatatttagagattgagatctgaccccattttttgcttaacacacaaaaaatccttgggca  13743200                                                                           --------->ANAC46                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                          <---------LBD16                                                                         <-----------GT1                                                                 ------>ZmHOX2a(2)                                                                 =========================HOX2a_HOX2a                                                                ==========================HOX2a_HOX2a                                                                <---------GLK1(1)                                                                --------->GLK1(1)                                                                <------ZmHOX2a(2)                                                               --------->AGP1                                                               <---------AGP1  <---------ARR14(2)                                                               --------->ARR14(3)     ----------->GT1                                           <---------ARR11(3)    --------->DAG2                                             --------->ARR14(2)   ---------->DOF2                                             --------->ARR11(3) ------ZmHOX2a(1)             ---------->DOF2                  <---------ARR14(2) ------At4g35610          <---------------AGL15                <-----------ARR10 ----->At4g35610          ------>ZmHOX2a(1)                   <---------CCA1(2)--------->ARR14(2)  -- ---NtERF2          <----------DOF2                           <---------At4g35610  ------>ZmHOX2a(1)   gaggaaaaagtttatagcgactcttttcctctaaaagggtctgtctcttccttcttctctcttcagatctccatttcacggtatccttctctcttcccct  13743300                                                                         --------->MYB52(2)                                                           <-----------GT1                        ---                                               <----------DOF2         <---------MYB52(1)       <----                    <----------DOF2           ------>ZmHOX2a(2)      <---------ANAC58           -----                   <---------ANAC58         --------->ARR11(3)       <---------ANAC58         ------>ZmHOX2a(1)          <----------DOF2   <---------YAB1  <---------ARR11(3)    <-----------GT1           --------- -------->ID1      <---------ANAC58 ------>ZmHOX2a(2)    <---------AHL20(2)         <-----------GT1<-   tgtctctattgacttttatttgctttgatttttatcgatcgtctctgatcttttgctaatttaacttgtttccgtttgttttgaatttactctctcctga  13743400                                                                                                 <---                                                                                                -----         ------->TEIL                                                                          <-----    <---------AtLEC2                                                                          -------    <---------ANAC58                                                      <---------WOX13(1)  <------    <---------ANAC46                                                    --------->ATHB51      -------    <---------ANAC58                                                    <--------ATHB1        <------ --->ZmHOX2a(2)     <---------At4g35610     ------>ZmHOX2a(2)           <---------ICU4        <------ -----ARR11(3)      --------->At4g35610   <---------ARR11(3)            --------->ATHB12      <------ ---->ARR11(3)  <---------ARR14(2)        --------->ARR11(3)           <---------AHL20(2)     ------- -->RAV1(2)     --------->ARR14(2)  <---------AHL20(2)                 <---------ATHB51      <------- ---------DOF2  ------->TEIL       <---------AHL20(2)          <---------YAB1            <-----------GT1   tctttggcatgtattttgaatctgctgttcttagttttttatttgatcttgttctcgtctgtcttaatattgaataattgactagttttatttacagatc  13743500 -------DOF2 ->ZmHOX2a(2) -ZmHOX2a(2) -->ARR14(2) ---ARR11(3)                                       ----------->GT1 -->ARR11(3)                                      ------>ZmHOX2a(2) -----ARR10------>ZmHOX2a(2)       <---------TOE1(2)                                              --- ---ARR14(2)                       <---------TOE2(2) <---------MYB52(1)           <---------AHL20(2) ---AGP1 --------->ARR11(3)     --------->YAB1   <------ZmHOX2a(2)             ------->TEIL     <---- -->AGP1 <---------ARR11(3)--------->AHL20(2)   <---------ARR14(2)         <---------TOE2(3)    ===== --CCA1(2)<------ZmHOX2a(2)<---------AHL20(2)   --------->ARR14(2)<---------TOE2(3)           <------ZmHOX2a(1)   tttgcattatagatcccttcaagtgcgattttaatcgtagattagttttggatccgttatattggactgatgtttttgatgtattttttggtattaggat  13743600  Previous    Next  AGI:  At4g27500.1    Description:  PPI1 (PROTON PUMP INTERACTOR 1). similar to PPI2 (PROTON PUMP INTERACTOR 2) [Arabidopsis thaliana] (TAIR:AT3G15340.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81802.1); contains InterPro domain STAT transcription factor, coiled coil; (InterPro:IPR015988) Range:  from: 13743116    to: 13746217    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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