Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <------MYB83                 <------MYB46(1)                                                     <---------AtLEC2                <---------AtMYB61          --------->YAB1                  ---------->DOF2    <------         <----------DOF2            --------->LBD16                      ------>MYB46(1)     <-------      <---------ARR11(3)           --------->LBD16                       ------>MYB83--------->YAB1   <----------DOF2                --------->HSFB2a(2)             --------->YAB1    <-------TEIL  <---------ICU4--------->MYB59   <---------HSFB2a(2)          <---------CCA1(2)   --------->AtLEC2 -ARR10<---------YAB1        <------ZmHOX2a(2)      <-----------GT1    --------->TOE1(2) <---------ARR11(3)   ctaatctttatctttggtttggttttatacgatcatcccgaagaaacatcatataaacctctcccatatcatacctacaaagaacatgcatgattttaac  13732500                                                             <----------DOF2                                                            <---------ANAC58                                                <-----------TGA1                  --------------->AGL15                                                <-----------HVH21                 <---------------AGL15                                               --------->bZIP60(1)               <---------ANAC58                                               --------->ETT(2)          <---------ANAC58       <---------MYB52(1)                      <---------bZIP60(1)<---------ZAT18<---------ANAC58      <-------GAMYB                           ---------->ID1<---------ANAC58 <---------ANAC58      <---------At4g35610             --------->TOE2(3) <---------MYB52(1)   <---------ANAC58  ------ -----GT1             <------MYB46(1)<---------ICU4 <---------At4g35610  <---------AtLEC2      <----- ----GT1              <------MYB83   --------->YAB1 --------->At4g35610  <---------ANAC58----------->GT1   ttattttcagttgtttcttctagtgggtttgagaactcatcatcaattgtcgtcatctgtttgctttgtgctcttgcatgcttacttgaatgagttataa  13732600                                                                                         <---------YAB1                                                                                      <----------DOF2                                                                                     ------>ZmHOX2a(2)                                                                           <---------ANAC58                                             <-----------GT1               <---------ANAC58        <---------DAG2          <---------ALFIN1                           --------->ALFIN1        <----------DOF2       ----------->RAV1(1)                     <---------ICU4<------ZmHOX2a(2)     --------->ARR11(3)      --------->MYB46(3)                    --------->YAB1   <---------RVE1(1)     <---------ARR11(3)      --------->REM1(1)                    <---------YAB1   <---------ARR11(3) --->YAB1           <---------YAB1    ---------->DOF2           --------->YAB1     --------->AGP1 ------GT1        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)       >>>>>>>>>>GATA-1       --------->ARR11(3)   caatagagaactttttagttttattttagcaacaacacttgaaagtataacttgttctactcgatttcataataagtgtgtgtgagatcttttgattact  13732700                             --------->ICU4                    ---------->DOF2               <---------------AGL15  <---------YAB1               --------------->AGL15 <---------AHL20(2)                                        ------               <----------DOF2     <---------YAB1                                            --------              <---------ANAC46   <---------AHL20(2)                                <-----------GT1---              <---------ANAC58  <---------YAB1                                    <<<<<<<<<<GT-3b ---              <---------ANAC58<---------ICU4          <-----------GT1    ------>MYB83  <---------CCA1(2)         <---------ZAT6 ----------->GT1<---------AHL20(2)<----------DOF2 ------>MYB46(1)   <---------   actagagactagagttgcttttaaaagtgtaatttttatttttattttgactcgatatacttttcaacaaaaaccaacttatatttttcttatcttttaa  13732800                                                            <---------TGA1a                                                            <---------O2                                    ===========================HOX2a_HOX2a                                    ==========================HOX2a_HOX2a                                    ------>ZmHOX2a(1)       --------->TGA1a                                ------>ZmHOX2a(2)           --------->O2                               <------ZmHOX2a(2)            =========================================                               <---------GLK1(1)         ----------->HVH21                              <---------ARR14(2)        ------>ZmHOX2a(2)                              --------->ARR14(3)       <------ZmHOX2a(2)                              --------->ARR11(3)      <-----------ARR10                              --------->ARR14(2)      --------->ARR11(3)                           <-                              <---------ARR11(3)      <---------AGP1                           <-----                             <------ZmHOX2a(1)        <---------ARR11(3)                  --------->ANAC58  ---------->DOF2            ==================================HOX2a_HOX2a                --------->ANAC46 --->YAB1                =============================================bZIP_DOF            --------->ANAC58 ->AHL20(2)<---------YAB1---------->DOF2             --------->RVE1(1)                 --------->SPL7 ------>YAB1  --------->CCA1(2)--------->GLK1(1)  ---------->DOF2<---------RAP2.6(2)--------->TOE2(1) ------>AHL20(2)       <---------YAB1             ====================bZIP_DOF      --------->TOE1(1) -DOF2     ----------->ARR10 =================================HOX2a_HOX2a          --------------->AtSPL8   taaaaaaagaggtatgatatgcattatcaaaggatctcctaaacttgtctataaaagatctcacgaggcggtctctgatcaaaacatcgtacaacccatc  13732900                                     <----------DOF2                      ------>NtERF2                                ------>ZmHOX2a(1)                        --------->DEAR3(1) =========bZIP_DOF             --------->TOE1(3)                --------->REM1(1)      <------NtERF2 ---------DOF2  *TSS           --------->TOE2(3) <-----------HVH21       ----------->HVH21       ---- ----CCA1(2)<-----------GT1<----------DOF2  --------->ZAT18   ------>ZmHOX2a(1)  <-----------HVH21   tctttttttttttttaacttgtcttctctctttccttaactttgatggcactgtcccttctctcctacaacgtctccgacctctgtctcggcaaacctcc  13733000                                     ------>NtERF2                                    --------->bZIP60(1)                                    --------->ANAC58                                    --------->ANAC46                                    --------->ANAC58                                    --------->DEAR3(1)                                  <---------ATERF1(1)                                 ----------->HVH21                              <---------ARR14(2)          ------>ZmHOX2a(1)                             <---------CCA1(2)<---------ZAT18                                 <------                            --------->LBD16   ------>NtERF2                                   -------             ------>ZmHOX2a(1)--------->ARR14(2)      --------->ARR14(2)          --------->HSFB2a(2)        <----------DOF2  ------>ZmHOX2a(1)   --------->DEAR3(1)      <----------DOF2         <-------   <---------MYB52(1) ------>ZmHOX2a(1)--------->DEAR3(1) --------->At4g35610     <---------HSFB2a(2) -->ZmHOX2a(1)  ------>ZmHOX2a(1)--------->ANAC46     <---------ARR14(2)  ------>ZmHOX2a(1)--------->WOX13(1)   tcttcgttgtctttcctcctcttcctcctccgtatccgacgccatcgctgccctcaaatcctctgaagacactttcctctccgtctggaattgcaatcac  13733100                                                              ==================bZIP_DOF                                                              <---------O2                                                       ----------->RAV1(2)                                                       --------->At4g35610                                                    --------->TGA2(2)                                                   <-----------HVH21                                                   <-----------TGA1                                                  ======================bZIP_bZIP                                                  --------->TGA2(1)                                                  --------->ANAC55(2)                                                  <---------O2--------->TGA1a                                                  --------->TGA1a                                                  <---------TGA1a                                                  ==============================bZIP_DOF                                                  --------->bZIP60(1)                                                  --------->O2--------->O2                                                  <---------bZIP60(1)                                                  <---------TGA2(1)                               ----------->GT1   ----------->STF1                          <---------ANAC58       <-----------STF1   --------->YAB1         <---------ANAC58      <---------TGA2(2) ---ICU4            <---------ANAC58           ----------->HVH21         --------->ARR11(3)    <----- -->YAB1            <---------ANAC58           ----------->TGA1      ---------->DOF2           ------ --ATHB12         --------->ALFIN1     <---------YAB1  <---------At4g35610    <---------WRKY18(1)   gacgatgacaataacacagagtgcgagtgcttggggaaaatatcaatggctgacgtcatctgccacttgtccaaagaccatgaccacagtctctgtgcct  13733200                                                                    <---------ARR11(3)                                                                   <---------GLK1(2)                                                           ------>MYB46(1)                                                           ------>MYB83                                                         ------->GAMYB <----------DOF2                                                         --------->AtMYB61                                                        --------->MYB46(3) ----ANAC46              --------->ANAC46             <-----------GT1<-------TEIL --->TOE2(3)            --------->LBD16      ------>ZmHOX2a(1)------>ZmHOX2a(1)   taaactcatccgtctctgttcttctccccaaaactcgttccattgtcctccatgttcaaccatcctgcaggttctttattcttccaaactctctctgttt  13733300                                                                             <---------AHL20(2)                                <---------ANAC58                            --------->AHL20(2)-------                         --------->MYB52(2)                                 <---------AHL20(2)<------                       <---------MYB52(1)                                --------->AHL20(2)   <------                      <----------DOF2                                   <---------AHL20(2)   <-------GAMYB                     --------->TOE2(3)                                <----------DOF2  <-----------RAV1(1)           --------->AHL20(2)   <---------ANAC58      <---------MYB52(1)--------->AHL20(2)  ---------   tgagggtctacataaaaattcaacctttagttgtgcttactctgtttctatgctctgtttttttgtaatgttctttaaattaatggtttttgtggggtta  13733400  Previous    Next  AGI:  At4g27460.1    Description:  CBS domain-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16914.1); contains InterPro domain Cystathionine beta-synthase, core (InterPro:IPR000644) Range:  from: 13732916    to: 13734310    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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