Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  ----------->HVH21            --------->LBD16           --------->LBD16     ------>ZmHOX2a(2)    <---------GLK1(1)    --------->GLK1(1)    <------ZmHOX2a(2)   <---------ARR14(2)   --------->ARR14(3)                                     <---------MYB52(1)   <-----------ARR10                                   <---------TOE1(2)   --------->ARR14(2)        ---------->DOF2          ------>ZmHOX2a(1)                            <-   <---------ARR14(3) <------ZmHOX2a(2)        <---------ZAT18                                   ----   <---------AGP1<-----------GT1            --------->HSFC1(2)            --------->LBD16        <---   <---------ARR11(3)<---------ARR14(2)     <---------HSFC1(2)           --------->ANAC46--------->ARR14(2)   --------->ARR11(3)--------->ARR14(2)     <---------MYB46(3)           --------->HSFB2a(2) ------>ZmHOX2a(1) ->YAB1   <---------LBD16  <-----------HVH21<---------HSFB2a(1)      <----------DOF2     <---------ARR14(2)   gccaagatctctcccggtttgacgatccctgttaagcccttcaagatggttcgctcctcggttttgtcattctttccgaaacagccttgtgaatccttca  13714400          --------->ANAC46         <---------ZAT14         --------->ZAT18       <---------ZAT14       --------->ZAT14       --------->REM1(2)    <---------ANAC46  <---------At5g28300 ---------DOF2 ----->At4g35610           --------->At4g35610          --------->AHL20(2)                    <------ ------At4g35610<---------GLK1(2)              <---------YAB1      --------->TOE2(3)         --------   gcttcaccgtgtacacaaggttctcaaactgctccaaaacatcaagaccaagattgaattaaaaaaaaacatcaaaacaagattgaataaacaaggttct  13714500                <---------AHL20(2)                                                     <---------ALFIN1              --------->AHL20(2)        --------->ARR11(3)                        <---------ATHB12             --------->AHL20(1)     ---------->DOF2                             ------>MYB83         <---------AHL20(2)  --------->AHL20(2)                            <-----------GT1  <--------     --------->AHL20(2)      --------->YAB1                  ---------->DOF2    ------>MYB46(1)   <---------GLK1(2)         <---------AHL20(2)     <---------YAB1     <----------DOF2--------->MYB46(3) -TEIL  --------->AHL20(2)--------->YAB1<---------ARR11(3)  --------->ANAC46  <---------MYB59 ->ARR11(3)  <---------AHL20(1)  <---------YAB1  <---------YAB1     <---------ALFIN1 ------->TEIL   tgaaagattatttaatatatatatgccctaataatatgaaaagttctcaatactattaatacacaaagcagcacttttaacctaatgaaccacggtgtgt  13714600                                      ---------->DOF2                                   --------->YAB1                                  --------->ICU4                                  <---------YAB1                                <---------ICU4                                -------->HAHB4                                --------->ATHB51                                --------->YAB1                                <--------ATHB1                               --------->AHL20(2)                               <---------YAB1                               <---------ATHB51                                                     <                               --------->ICU4                                              <---------TOE2(3)                             --------->YAB1                                                <---------TOE1(3)                            <---------AHL20(2)                                   --------->YAB1------                 ---------->DOF2<--------HAHB4                       <<<<<<<<<GATA-1   <----------DOF2      ------->TEIL         --------->AHL20(2)  ------->TEIL     <---------ARR11(3)    --------->TOE2(3) -ANAC46--------->YAB1 <-------TEIL--------->AHL20(2)           --------->ARR11(3)  <----------------   tctccatgtatcataactaaaaagatgcatataataattataaagtatgtatcaaggtgataacaagatttatctataaacaaacatacctttaaggtaa  13714700                                                            <------ZmHOX2a(2)                                                 <------MYB83                                                 <------MYB46(1)                                                <---------TOE1(2)           <----------DOF2                      <---------AtMYB61          <---------DAG2                       <---------MYB52(1)   --------->ATHB12                          --------->ATHB12------>ZmHOX2a(2)  <---------YAB1                            <---------YAB1 <---------ARR14(2) ------ZmHOX2a(1)                    <------ZmHOX2a(2)  <---------HSFB2a(2) --->MYB52(1)              --------->DAG2 --------->YAB1--------->HSFB2a(2)<-------TEIL       <------ -AG   <-----------GT1    ---------->DOF2<------ZmHOX2a(2) --------->ARR14(2)            <---------YAB1   caggattattagcctttttgaaaattgaaaaaggaagagatcgatcatcgttggtcttcgcgatcggggtttcaacatccatagaaacctcttgattatc  13714800             ------>ZmHOX2a(2)          --------->YAB1                             <---------At4g35610          --------->ATHB12                           --------->At4g35610         <---------ATHB12                         ---------->DOF2         --------->ICU4                       <------ZmHOX2a(1)       --------->YAB1                        --------->ICU4                                         <     ------------>CBF                       <---------TOE2(3)           <---------GLK1(1)     -------    ----------->RAV1(1)                     <---------TOE1(3)           --------->GLK1(1)     <------  --------->LBD16                   --------->At4g35610           ---------->DOF2          --------->ZAT6 --------->ANAC46    ---------->DOF2<---------At4g35610    ------------>CBF--------->AHL20(2) <------ -----GT1<---------YAB1   <----------DOF2  --------->MYB52(1)--------->WOX13(1)    <-----------GT1  <   catccccaacaatgatcgatctataaagctttactctcagataactaaggattaaagctgaatcaatcgaaaggaaatcaaatatttgctcttccactaa  13714900                                                                 <---------ANAC58  <------ZmHOX2a(1)                                              <---------ANAC58 ---------TOE2(3)                     <------------CBF     <-----------RAV1(1) -------->AGL15                    ------------>CBF  <---------AHL20(2) ---------AGL15          <---------HSFB2a(2)         <---------AHL20(1)       ---------->DOF2 ---ATHB12<---------MYB46(3)   <------ZmHOX2a(1)     --------->AHL20(2)  --------->GLK1(1) ---------TOE1(3)        --------->HSFB2a(2)   --------->YAB1    <---------ANAC46   ttaaggaagtatttgttgaagttgaatcgagaaggagaacaattgctaatagtattttattttgttggcttagggagttctaaagacagaaaacaaaact  13715000                                                                                            ---------                                                    --------->DAG2                          <--------                                                   --------->SPL7                           ---------                                                   ---------->DOF2                          <--------                                                --------->ANAC46                            <--------                                                <---------ANAC55(2)                        --------->HSFB2a(1)                             <---------AHL20(2) --------->ANAC55(1)                        <---------HSFB2a(1)                            --------->AHL20(2)  --------->ANAC58              <-----------TBP   <----                      --------->At4g35610    <-------TEIL                   <------ZmHOX2a(1)--------               <---------AHL20(2)----------->GT1--------->ANAC58          <---------TOE2(3)<---------HSFC1(2)             <----------DOF2<---------AHL20(2)  --------->ANAC55(2)       <---------TOE1(3)--------->HSFC1(2)       ---------->DOF2<---------At4g35610<---------TOE2(3)            <----------DOF2     -----------   aaaaaactctaaagtcttttatttagctaaataaatagaaattagggttcacgtaaggcaagtgagagagcgttttaaggatatatagaaggaagattct  13715100                                                                                          --------->HSFC1(2)                                                                                --------->WOX13(1)                                                                    <---------AHL20(2)    --------->HSFB2a(1)                                                                    --------->AHL20(2)    <---------HSFC1(2) >ARR14(2)                                                          --------->AHL20(1)    <---------HSFB2a(1) -GLK1(2)                   <---------YAB1                      <---------AHL20(2)       --------->ARR14(2) >ARR11(3)                <----------DOF2                       --------->AHL20(1)       <---------ARR11(3) -ARR11(3)             --------->ANAC58                  <------NtERF2  --------->YAB1   --------->ARR11(3) -ARR14(2)             --------->ANAC58          --------->ATHB12  --------->AHL20(2)    <---------ARR14(2) ------DOF2           --------->ZAT18           <---------YAB1  --------->AHL20(2)       --------->GLK1(2) ->GLK1(2)            <---------ZAT18      --------->MYB52(2)  --------->AHL20(2)       <---------GLK1(2) >ARR10      <---------MYB52(1) <-----------RAV1(1)     --------->RAP2.6(2)   <---------ATHB12     <-   ttagagaatgcttctgttactaagcacgcttttattgtgggatgtttgtttcgattggccgaaaaaaaaattaattagaaatcaatctgagaatcttcta  13715200                                                                                                   <-                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                    >>>>>>>>>GT-1 <--                                                                                 ----------->GT1  ---                                                                                 <------MYB46(1)  <--                              --------->AHL20(2)                                 <------MYB83 <------                  <----------DOF2   <---------AHL20(2)                           <---------MYB46(3)--                  <---------DAG2    <---------YAB1                   <---------ANAC58      <---------AHL20(2)                 <---------ANAC58<---------AHL20(1)          <----------DOF2 --------->ATHB12 <------                 <---------ANAC58--------->AHL20(1) --------->AHL20(2)      <---------ATHB12---------         <---------AHL20(2)   <---------AHL20(2)    <---------AHL20(2)      --------->MYB46(3)-------       <----------DOF2       <---------YAB1       --------->TOE2(3)  <---------ANAC46      --------->AHL20(2) ----------GT1 <-----------GT1--------->YAB1      <----------DOF2    <---------ANAC58     --------->AHL20(2)   tttgctattcttttattttgctttttagataattatatattattcatacaatctttaattgcgcttttgtttcgtccaacgattggttaatatttaataa  13715300  Previous    Next  AGI:  At4g27420.1    Description:  ABC transporter family protein. Identical to Probable white-brown complex homolog protein 9 (WBC9) [Arabidopsis Thaliana] (GB:Q9SZR9); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT1G31770.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62144.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42066.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39230.1); contains InterPro domain ABC-2 type transporter (InterPro:IPR013525); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593) Range:  from: 13712205    to: 13714803    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version