Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->RAP2.3(1)                <------ZmHOX2a(1)                        --------->ATERF1(1)         --------->At4g35610                             <------NtERF2         <------NtERF2<------ZmHOX2a(1)                 <---------RAP2.3(1)        <---------RAP2.3(1)                             <---------ATERF1(1)       <---------RRTF1(3)                               ------>NtERF2                               <       <---------RAP2.6(2)                             --------->DEAR3(1)           --------->ALFIN1<       <---------DEAR3(1)                              <---------DEAR3(1)         <---------ANAC46  <      <---------At4g35610                             --------->ATERF1(1)  <------MYB83            <-      --------->At4g35610                             --------->RAP2.3(1)  <------MYB46(1)         -- ------>ZmHOX2a(2)  --------->ALFIN1                 <---------ATERF1(1) <--------P<-------MYC3   <-- ------->ARR14(2)  <------ZmHOX2a(1)                 <---------RAP2.3(1)<-------GAMYB             --- --------ARR14(2)--------->ALFIN1                   <---------DEAR3(1) <---------MYB46(3)         <-- ---->LBD16 <------NtERF2                         --------->ARR14(2)   --------->MYB55(2)        <--- ----LBD16<---------ANAC46                        <---------ARR14(2)  <---------TOE2(2)    ---------- ---LBD16<---------LBD16 <------ZmHOX2a(1)  --------->PCF5       --------->MYB52(1)------->MYC3 ----- >ARR10<---------RAP2.3(2)               <---------AtMYB61--------->DEAR3(1)      <---------O2-------   ggatcggtagcggcggaaggaggaggaggagtttggagagggagaggtccccaatcggcgccgaagagaacggaggttggagaaacgtggagaatgacga  13680500        ----------->HVH21       --------->LBD16       --------->HSFB2a(2)                                                                      <----      --------->ANAC46                                                                          <----      <---------LBD16                                                                           -----     <---------LBD16                                                                            -----   <---------ARR14(2)                                                                           <----   --------->ARR14(2)                                                                           -----  <------NtERF2                                                                                <-----  --------->ATERF1(1)                                                     --------->ATERF1(1)  ------ ------>NtERF2                                                           ------>NtERF2        ------- <-----------HVH21                                                       <---------ATERF1(1)<-------- <---------ATERF1(1)                                                  ------->GAMYB         <-------- ---------ANAC58                                                   <---------DOF5.7(2)     --------->ANAC58 ---------ANAC58                                                   --------->MYB52(1)<---------At5g28300 ---------DEAR3(1)                                                <---------WRKY12 <---------SPL7---- -----NtERF2                                                      <---------WRKY38(1)--------->SPL7 < ------->ATERF1(1)                                               --------->WRKY18(1)--------->MYB52(1) -------RAP2.3(1)       ------>ZmHOX2a(2)                       <-----------HVH21 =================== --->NtERF2             --------->ETT(2)                      --------->DAG2     ==================== -------ATERF1(1)    -------->HAHB4                <----------DOF2<---------WRKY45------>ZmHOX2a(2) - ------DEAR3(1)      --------->ATHB12       ---------->DOF2 ---------->DOF2      <------ZmHOX2a(2)  < ->TGA1<---------HSFB2a(2)            --------->SPL7      --------->HSFB2a(2)   <---------ARR14(2) <- ---->ATERF1(1)     --------->ICU4   --------->MYB52(1)   <---------HSFB2a(2)   --------->ARR14(2)<-- -->ETT(2)          <---------YAB1 <---------MYB52(2)   <---------LBD16 --------->DEAR3(1) --------->ANAC58   cggcgtctccgggacggatgtaatgatcgacagcccagcgaacagcgaaagcgctttcttcggaaaggtcaacggcgactccgatcttacggcgagcacc  13680600    <------MYB83    <------MYB46(1)  <--------P  <---------MYB52(1)  --------->ALFIN1 <-------GAMYB                                                                ======================= ---PIF5   <------ZmHOX2a(1)                                                  ------>ZmHOX2a(2) -----DEAR3(1)                                                              --------->ARR14(2) ---->ATERF1(2)                                                             --------->ARR11(3) ---->DEAR3(1)      <---------ANAC46                                        <---------ARR11(3) -----ATERF1(2)  <---------RAP2.6(2)                                        <---------AGP1 -->PIF5<--------P --------->At4g35610                                     <---------CCA1(2) ----LBD16<------MYB46(1)                                              <------MYB46(1) --->DEAR3(2)    <---------RRTF1(3)                    <---------O2    <---------MYB46(3) -->MYB52(1)   --------->MYB52(1)                      <---------ANAC46<------MYB83 -ABI4(2) <------MYB83    <------ZmHOX2a(1)            <---------bZIP60(2)<---------MYB46(3) -ZAT2<---------ANAC46<------NtERF2         <---------MYB46(3)        <---------AtMYB61 -------->AtMYB77<---------RAP2.3(2)       --------->ALFIN1         <------ZmHOX2a(1) ---------DEAR3(2) <------NtERF2           <---------AtMYB61      <---------TOE2(3)                <- =================HOX2a_HOX2a              <---------ANAC46    <---------REM1(1)                  <-- =================HOX2a_HOX2a--------->ALFIN1       ----------->TGA1=================HOX2a_HOX2a  === -------->MYB55(2) <---------LBD16<------ZmHOX2a(1) ----------->HVH21 --------->ALFIN1      --------- ---------MYB46(3)<---------RAP2.3(1)    <---------MYB46(3)  --------->At4g35610            <-------- --------DEAR3(1)<---------DEAR3(1)     <---------AtMYB61  <------ZmHOX2a(1)<---------ARR14(2)   ---- -------MYB52(1)--------->At4g35610     --------->ALFIN1   ==========================HOX2a_HOX2a<----   ggcggttggggtaggagtagcggcggaaggagtggaggaagagtggtggtgagagtgacgaggagatgaaggatggtggatcttgatgttagggagatga  13680700        --------->GLK1(2)        <---------ARR14(2)        --------->ARR14(2)       <---------GLK1(2)    --------->YAB1  --------->GLK1(2) ====HOX2a_HOX2a --------KAN4(2) ----ZmHOX2a(1)        ------>ZmHOX2a(2)                                <-----------GT1             - =============================HOX2a_HOX2a                    <---------HSFB2a(2)                    < >At4g35610          <---------ARR11(3)                   <---------AHL20(2)                <------ZmHOX2a(1) -At4g35610        <---------YAB1                      <---------------AGL15         <------ZmHOX2a(2) ------->GT1     --------->YAB1   <<<<<<<<<TBF1        --------------->AGL15   <-----------GT1 <----- -----TOE2(3)   <-------TEIL   <<<<<<<<<TBF1<----------DOF2  --------->HSFB2a(2)     ==============HOX2a_HOX2a   ggataatcggaatctggattcatgatcgtcttcttcttcttctctgctttgattcaacaatttatagaaacttttgactattttccgatcgagaggaaga  13680800                                                                        --------->AHL20(1)                                                                        <---------AHL20(1)                                                                        --------->AHL20(2)                                                                  ----------->GT1      <---------YAB1                                          <---------YAB1      --------->ICU4                                    <---------AHL20(2)    --------->YAB1                                      --------->AHL20(2)   --------->ICU4                      --------->AHL20(2)  --------->AHL20(2)   <---------YAB1                      <---------YAB1  <---------AHL20(2) --------->YAB1         <---------ANAC58               --------->AHL20(2) <XXXXXXXXXXXXXXXXXXXXMIR414           <---------AHL20(2)  <---------AHL20(2) -------->ICU4          <---------ANAC46               <---------AHL20(1)            <---------ANAC46 ---------YAB1          <---------ANAC55(1)            --------->AHL20(1)  <---------WOX13(1) ----At4g35610          <---------ANAC58              --------->AHL20(2)<---------AHL20(2)       ----   tgatgatgatgatgaagaagagagagccgtgtttgtcagttttaattagtttacaaattaatttataagtgtaattaattgctaattgtttggataatgg  13680900                                             --------->ZAT2                                             <---------ZAT2                                             <---------At4g35610                                             --------->At4g35610                                          --------->At4g35610                                          <---------At4g35610                                      <----------CDC5                                    --------->ALFIN1                                   <-------PIF5                                   ------->MYC3                                   ------->MYC2                                   ------->PIF5                                   ------->MYC4                                   <-------MYC3               --------->YAB1                                   <-------MYC2               --------->ATHB12    <---------AHL20(2)        *TSS<---------ANAC58        <------ZmHOX2a(1)    --------->AHL20(1)       <---------HSFB2a(2)        <---------TOE2(3)                         <--    <---------AHL20(1)       --------->HSFB2a(2)  <---------YAB1                                -----    --------->AHL20(2)      <---------ANAC55(2)   --------------->AGL15                      <-------   --------->AHL20(2)  <---------ICU4--------->ZAT2 <------------CBF--------->ZAT18      --------->ZAT14 --->TEIL          ----------->GT1<---------ANAC58<---------------AGL15                  <---------ZAT14   atgtattaaattgtcaagaagttgaaaattacgagaacgtgctgagcagctgcttattgaggaatcatagggaactgttttatcttatcagtttactttt  13681000      <---------ANAC58      <---------ANAC46      <---------ANAC58                                                                          <----     <---------DEAR3(1)                                   --------->ZAT6                        ----- -------YAB1                                             <---------YAB1            <-----------RAV1(1) ---->YAB1                                           <----------DOF2     --------->At4g35610 ------>ZmHOX2a(2) ---DOF2<---------MYB52(1)                           <---------DAG2  --------->ARR14(2)  --------->ETT(2)   ataatgggccgtgtgttttgatattaaggcccatatgtgttttgtcaaacaatgactttatcagtatgtcaaatttgctgagcaattgttgtcgatcgta  13681100                                     --------->ARR14(2)                                     --------->GLK1(2)                           ------>ZmHOX2a(2)                         <---------ARR11(3)                                      --------->ANAC46 <--                         --------->ARR11(3)                                      --------->ANAC55(2)                       --------->ICU4<---------ARR11(1)                          <---------ANAC55(2)                     <---------ICU4  <---------ARR14(2)                         <---------LBD16   ---                    --------->ICU4   <-----------ARR10              --------->ICU4              -----   <---------AHL20(2)--------->YAB1  ------->TEIL      --------->TOE2(2)      <-----------GT1 <------ -----ARR14(2)    --------->YAB1    <---------ARR14(1) --------->TOE1(2)    <---------ICU4    <------ ---->ARR14(2)  --------->AHL20(2)<---------MYB59     --------->YAB1<---------YAB1--------->LBD16<---   tttgtttatttgtatttttaaaataatgatctaagaccgaatctaactattttcaaacataagagttgtgatgaataatttttccgtaatacatggattt  13681200   <---------MYB46(3)   <------MYB46(1)   --------->HSFB2a(1)                                                             --------->ANAC46   <---------HSFC1(2)                                                              --------->ANAC58   <---------HSFB2a(1)                                                             --------->ANAC58   --------->HSFC1(2)                                                             <---------ZAT18   <------MYB83                                                                   --------->ZAT18 -------TOE2(3)                                                                   --------->SPL7 ------>ANAC55(2)                                                                 --------->ZAT14 ---->MYB52(1)                          <<<<<<<<<GATA-1                           <---------ZAT14 ----DOF2                            <---------AHL20(2)              <---------------AtSPL8 ---GLK1(1)                 <---------ATHB12 --------->YAB1   <---------YAB1    <---------SPL7 ------LBD16  <---------AtLEC2      --------->AHL20(2)   --------->YAB1      <-------TEIL   <--------   acggatggttctatttgcattacatccacaatgaataattttatctataatacatgaaatcacgatgaaagattgtacatacagtacgctataactttca  13681300                                                                                           <---------                                                                                           ----------                                                                                           <---------                                                                                           <---------DAG2                        <---------TOE1(2)                                                 <----------                        <---------TOE2(3)                                         <---------ARR14(2)                --------->YAB1                                <---------HSFB2a(2) --------->ARR14(2)                <---------ICU4                         <-----------GT1            --------->ARR11(3)      <<<<<<<<<MYB2     <---------TOE2(2)    <---------ANAC46 --------->HSFB2a(2) <---------ARR11(3) --DOF2    XXXXXXXXXXXXXXXXXXXXX>MIR830* <----------DOF2  <----------DOF2    --------->MYB52(1)   <--   ataacttggttttctccataataacttaggtttttgccataaactttgtgtagaaattttctttttagaaatattgaactactggatattgaactttttt  13681400  Previous    Next  AGI:  At4g27320.1    Description:  universal stress protein (USP) family protein. similar to universal stress protein (USP) family protein [Arabidopsis thaliana] (TAIR:AT5G54430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21250.1); contains InterPro domain UspA; (InterPro:IPR006016); contains InterPro domain Universal stress protein (Usp) (InterPro:IPR006015); contains InterPro domain Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729) Range:  from: 13678470    to: 13680930    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version