Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------GLK1(2)                 <---------ZAT2                            <---------ARR11(3)                 <---------At4g35610                       --------->ARR11(3)             <---------ALFIN1               --------->GLK1(2)            <---------ZAT14          --------->CCA1(2)    --------->GLK1(1)            --------->ZAT14         <---------ARR11(3)    <---------GLK1(1)          --------->ANAC46  <-----------HVH21    --------->LBD16          --------->bZIP60(2)<---------MYB52(1)<---------LBD16        ----------->RAV1(1) <-----------TGA1--------->GLK1(1)                          --------->HSFB2a(2)      ------>NtERF2        --------->ANAC46<---------GLK1(2)            <------ZmHOX2a(1)     <------ ----->YAB1----------->RAV1(1)      --------->ARR14(2)   <---------ARR11(3)            <---------HSFB2a(2)   caaaactctgccacaacacagcttcttctccgtcactagatatgagattccctgaacatgatatcttcaagagaggattatttgctgttttagaagcttt  13672000             --------->YAB1             <---------ICU4            <---------YAB1            --------->ICU4          --------->YAB1                                                                    <--------         --------->ICU4                               --------->ARR11(3)                    <--------       --------->YAB1                                 <---------ARR14(2)                    <--------      <---------YAB1                   <-----------HVH21                              <---------ARR14(2)      --------->ICU4                  --------->DEAR3(1)------>ZmHOX2a(2)       <---------ARR14(2)    --------->YAB1                  <---------At5g28300<------ZmHOX2a(2)        --------->GLK1(2)   <---------YAB1                 <---------ZAT14     --------->ARR14(2)        --------->ARR14(2)   --------->ICU4          --------------------->WRI1 <---------ARR11(3)     <---------TOE2(3) ----DOF2<---------YAB1    <----------DOF2     --------->At4g35610--------->GLK1(1)   --------->ARR14(2)   tgttgatgatgatgatgatgaccacaaggctttgtgttcaccgtcgaatagctgaagatcgccaagggaactcaagtttaagaatccagatgtgccgtag  13672100                    --------->MYB46(3)                   --------->ANAC58                   --------->ANAC58              <------MYB83            <--------P      <XXXXXXXXXXXXXXXXXXXXMIR851-3P    <---------MYB46(3) --------->MYB52(1)                --------->ANAC58   <--------P <------MYB46(1)                       --------->ANAC58   <---------TOE2(3)  <-------GAMYB   ------>NtERF2                     --------->ANAC58   <---------TOE1(3) -ANAC58    <---------MYB52(1)                      --------->ANAC46   <---------AtMYB61       ------ -ANAC58   <-------GAMYB                      ------->TEIL  --------->MYB52(1)<---------------AGL15 -ANAC46  <---------MYB46(3)             <---------ANAC46--------->ANAC58 <--------P   --------->WRKY18(1)   agagggttgtttcggttggccacccaaacgactgcaaatggttccatgtaccacaagccaagaaaccgatgttgaggttgctcttcttggtcaagactaa  13672200                                                    <------ZmHOX2a(1)                                               ------>ZmHOX2a(1)                     --------->ANAC58                                              --------->TOE2(3)                      --------->ANAC46                                     <---------ARR14(2)                              --------->ANAC58                                     --------->ARR14(2)   <----------DOF2          ---------->DOF2                                    <---------GLK1(1) --------->GLK1(1)      <---------YAB1                                <---------TOE2(3) <---------TOE2(3)         --------->AHL20(2)                      <---------HSFB2a(2)     --------->TOE1(3)      --------->bZIP60(1)--------->MYB52(1)               ----------->RAV1(2)  --------->GLK1(1) <---------GLK1(1)    --------->YAB1  ------->GAMYB ---->DOF2    --------->GLK1(2)--------->MYB52(1) <---------TOE1(3)  <---------bZIP60(1)----------->RAV1(1)   agaacccaagttggaaaacctggtctggagaactaagggtatctccatccttaaggaattcttttggagtgatgacattataatccaaagcaacagagag  13672300                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                 ----                                                                                            ---------                                                                     <----------DOF2        <--------                                                                  <-----------GT1          ----------                      <---------DOF5.7(2)                    --------->TOE2(3)             ----------                      --------->MYB52(1)------->TEIL      <-----------GT1              <----------DOF2   agaagatgaaattaagaacagagataacgaaaacagagaatgaatttctctcatcgaatgaaaccttttttctttctagttttgtgactctttactaaat  13672400           --------->YAB1          <---------YAB1         <---------AHL20(2)         --------->AHL20(1)         --------->AHL20(2)        --------->YAB1       <---------YAB1     <---------ICU4     --------->YAB1     <--------HAHB4     -------->ATHB1    <---------ATHB12    --------->ICU4  --------->WOX13(1) ----------->CBF ------->ANAC58                              <---------AHL20(2) ------->ANAC58                             <---------AHL20(2)                                    <-- ------>DAG2                             <---------AHL20(2)              ------>MYB46(1)        ----- ------>DOF2                           <---------RVE1(1)                 ------>MYB83      --------->ANAC58 ------>AGL15                         <---------ARR11(3)               ------->GAMYB       --------->ANAC58 -------AGL15                     <-------TEIL   <---------AHL20(2)    <---------MYB59<----------ID1 ------->AGL3          --------->YAB1 --------->ARR11(3)          --------->SPL7      ----------->HVH21 ------->AGL2         <---------YAB1  <---------GLK1(2)       --------------->AtSPL8--------->ANAC46-   aaagcaatcattataatacacattatgaaaatcacatacagatttttttattttttttgtcaacttcgtacaacccaacttggcataagcgacaagtcaa  13672500                                                                        --------->ATHB51                                                                        -------->ATHB1                                                                        --------->ATHB12                                                                        <---------ICU4                                                                       --------->ICU4                                                                       --------->AHL20(2)             --------->ARR14(2)                                        <---------AHL20(2)             <---------GLK1(2)                                         --------->AHL20(1)             <---------ARR14(2)                                        <---------YAB1        --------->AtLEC2                                            <---------AHL20(2)    ------------>CBF                           <----------DOF2      --------->AHL20(2) -------ARR11(3)                       --------->YAB1               --------->AHL20(1)       -------- ------>GT1  <------------CBF         <---------ATHB12             --------->AHL20(2)        -------- -------->AHL20(2)                ------------>CBF         ----------->GT1<---------YAB1     --------   gataaattcaatgcagattgtctgtggatgttgaacttcaatgataaaacttttcttcagaatgaaaaaaaaaattattagggtgttttgtttgaacgcc  13672600       --------->CCA1(2)      <---------ARR14(2)      --------->ARR11(3)      <---------ARR11(3)                                                                 <---------ATHB12      --------->ARR14(2)                                                            --------->ANAC58      --------->ARR11(1)                                                            --------->ANAC58    --------->ANAC58                                                              ---------->DOF2    --------->ANAC58                                     <---------YAB1       <------ZmHOX2a(1)    ----------->ARR10                       <---------HSFC1(2)           --------->STY1(2)       <--- ->ANAC58             <---------TOE2(3)     <---------HSFB2a(1)          <---------STY1(2)<---------AHL20(2) ->ANAC58       ------>ZmHOX2a(1)           --------->HSFB2a(1)         --------->ANAC58 --------->ICU4 ->ANAC46<---------YAB1    <---------YAB1   --------->HSFC1(2)          --------->ANAC58 --------->AHL20(2)   agagacaagatatgattcctcattaagttttgatggccatgttggaagtttctcagattaagagtgtataagcctagcaaggacaaaagcaataaataga  13672700                         <---------------AGL15                         --------------->AGL15                        ----------------->AGL3                        ----------------->AGL1                        <-----------------AGL1          --------->ATHB12                        <-----------------AGL3         <------ZmHOX2a(2)              <---------WRKY18(1)                      <---------YAB1           <---------ANAC58                           <---------ARR11(3)                           <-           <---------ANAC58                           --------->ARR11(3)                   ----------     <-----------ARR10<-----------GT1            --------->GLK1(2)         <-------TEIL    --------->ANAC58 ------REM1(1)>>>>>>>>>WRKY18            --------->ALFIN1   --------->YAB1 ------->TEIL    --------->ANAC58   tgtggctaatcttccttgacttagtcaccatataagggagcgagtggtcagaatcagatcattgatagtttgatatgtacattgcgacgattcaagtaaa  13672800                                                                      =======================MYC_MYB                                                                      <---------bZIP60(2)                                                                      <---------TGA1a                                                                   <XXXXXXXXXXXXXXXXXXXXMIR170                                                                 <---------ANAC46                                                                 <---------ANAC55(2)                                                                 <---------ANAC58                                                                 <---------ANAC55(1)                                                                 ============================MYC_MYB                                                                 --------->ANAC55(2)                                                                 <---------ANAC58                                                                 <---------TGA1a                                                                 --------->TGA1a               ------                                                                 <---------O2            <---------ARR14(2)                        <---------MYB46(3)        <-----------RAV1(2) <---------O2       --------->ARR14(2)                       <---------ANAC46         <---------ALFIN1 --------->O2     <---------DOF5.7(2)                    <-----------RAV1(1)         ----------->RAV1(1)----------->HVH21 ------->GAMYB                 <---------AGP1           <------NtERF2          --------->bZIP60(1)--------->ANAC58                 --------->ARR11(3)     <---------DEAR3(1)       <---------bZIP60(1)--------->ANAC58            --------->ATHB51         --------->ATHB12          <---------TGA2(2) <---------WRKY38(1)            --------->ATHB12         <---------MYB46(3)       ----------->TGA1   <---------WRKY12            -------->ATHB1 --------->CCA1(2)   --------->MYB46(3)<---------bZIP60(2)--------->ANAC46  --------->AtLEC2 ------>ZmHOX2a(2)<---------ATHB12--------->At4g35610          <---------WRKY45 ------TEIL<---------YAB1 --------->ARR14(2) --------->PCF2   ----------->HVH21 --------->WRKY18(1) ->GT1    <----------DOF2 <---------ARR14(2)------>NtERF2     ------>ZmHOX2a(1)<-----------HVH21   attcatgcattgcattattgatctggtggatatagccaatcgttggcgacccacaggtgaagtcctgacgtgacatggctcagtcaacgcaaatactact  13672900  Previous    Next  AGI:  At4g27300.1    Description:  S-locus protein kinase, putative. similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G27290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39094.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39130.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77004.1); contains InterPro domain Apple-like (InterPro:IPR003609); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain S-locus glyco Range:  from: 13669314    to: 13672354    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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