Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                    <---------ZAT2                                                            <------      <---------WRKY12                                                                        <------      <---------WRKY38(1)                                                                     -------      <---------ETT(2)                                                                        -------     --------->WRKY18(1)                                                     <----------DOF2  -------    <--------ZAP1   --------->ZAT2                                     --------->At4g35610    <------   <------MYB83     --------->At4g35610                                --------->ZAT2<<<<<<<<<RAP2.2   <------MYB46(1)  <---------At4g35610                                <---------At4g35610   <-------   <---------DEAR3(2)                                           <----------DOF2  <----------DOF2   tgagtcggtcaacaaaatgctaagctgtggattgtttttttgttttgaatattcaatggtttctgtctttctgagcttactttctttagattgagaagct  13665900                                                                              --------->At4g35610                                                                             ------->TEIL                                                                            <---------AtLEC2    --------->ZAT14                                                     <----------DOF2  --------->ANAC46                                                   <-----------GT1 -->HSFC1(2)                                                      <---------ANAC55(2) ---HSFC1(2)                          <---------AHL20(2)          --------->ANAC58 ---At4g35610                  --------->TOE2(3)                  --------->ANAC46 -->At4g35610                <---------ARR11(3)                   --------->ANAC55(2) -->ZAT2<----------DOF2      --------->ARR11(3)                   ----------->GT1 -->HSFB2a(1)               <---------CCA1(2)  --------->AHL20(2) --------->ANAC58        <---------ICU4 ---HSFB2a(1)           <----------DOF2        --------->ATHB51   --------->ANAC55(1)    <---------ATHB12 ----ARR10      <---------TOE2(3)    <---------AHL20(2)      ----------->HVH21<---------At4g35610   ccccactaaactttgtttgatgttttctttatatcttagttaaattgcattatttagttccaattgacaagtaactttgcatctccattgaatcattcca  13666000                                                                                            ---------                                                                                           <---------ARR14(2)                                                                                           --------->ARR11(3)                                                                                           --------->ARR14(2)                                                                                           <---------GLK1(2)                                                         <---------WOX13(1)                <---------ARR11(3)                --------->ANAC58                        <-------GAMYB                    ----------->ARR10                --------->ANAC55(2)               <-------MYC2                           --------->ANAC58                ----------->GT1  --------->AHL20(1)    <---------MYB46(3)            --------->ANAC58                --------->ANAC58 <---------AHL20(1)   <---------AtMYB61              --------->ANAC46                <---------ANAC55(2)               ------->MYC3                       --------->ANAC58                --------->ANAC55(1) <---------AHL20(2)<---------TOE2(3)       --------->ARR11(3)    -         ----------->TBP        --------->AHL20(2)------->MYC2             --------->YAB1--------->ANAC58       ------>ZmHOX2a(1)    ----------->TBP       <-------MYC3             --------->AHL20(2)   <----    ---------->ID1       <----------ID1         <-------TEIL <---------------AGL15--------->ANAC46  -   ccatttgtcctataaaacacgtataaaactacaaatatataatctctaggcacgttgtggttgacattaagagcaaataatatcacgacgcaagatactg  13666100                                                                            ------------>CBF                                                                       --------->TOE2(3)                                                                      >>>>>>>>>MYB98                                                                     ------>MYB83                                                                     --------->MYB52(1)       <---------ICU4                                                ------>MYB46(1) <---------At4g35610                                               <---------MYB111(1) >CCA1(2)   <---------YAB1                                         <---------MYB59             <----- -------->ANAC58                                             --------->AtLEC2       <-----------GT1 -----ZAT14------------>CBF                                  --------->ANAC46     <-----------GT1 -------->ANAC58                                 <-----------GT1   <---------MYB46(2)          ------   gacagcaactcattacaattctcttccatgtctctctcatttacacatattaaactatattccatggaacctaacttaaacaattttctctatatttcca  13666200                            --------->ICU4                            <---------YAB1                                     --------->ANAC46                   ------->GAMYB                                              --------->DEAR3(1)           <---------AHL20(2) <------------CBF                          --------->ANAC46--------->ANAC46           --------->AHL20(1)<---------ICU4                        <---------TCP20  --------->AtLEC2           --------->AHL20(2)--------->ATHB12------>MYB46(1)       --------->ARR14(2)   --------->ANAC58  <---------AHL20(2)      --------->YAB1     ------>MYB83--------->ANAC46    --------->DEAR3(2)  --------->AHL20(2)     <---------YAB1 <-----------GT1  --------->ANAC58  <---------ARR14(2) ----HSFB2a(2)  --------->MYB52(1)  <-----------TBP --------->ARR14(2) --------->LBD16  --------->ANAC58 --->HSFB2a(2)  <-----------GT1     --------->AHL20(2)   --------->ANAC58  --------->ARR14(2)<-------   gtaattaaacaaataaaataactgactatcatcattgtttatataccaacttcgtttccacgctctctggttccacagaaccggccatggaagccactaa  13666300                                                              <---------YAB1                                                              ------>ZmHOX2a(1)                                                             --------->TOE2(3)                                                          <---------ARR14(2)                                                          --------->ARR11(3)                                                          <---------ARR11(3)                                                          --------->ARR14(2)                                                         --------->GLK1(1)                                                    --------->At4g35610                                                --------->ANAC58      --------->At4g35610                       --------->ANAC58      <---------At4g35610                       --------->ANAC46    --------->REM1(1)              --------->GLK1(2)<---------At4g35610  <----------DOF2--------->At4g35610  <----------DOF2    <---------GLK1(1) --MYB52(2)    --------->YAB1     <---------GLK1(2)--------->MYB52(1)             ---------->DOF2   tgtgcttcatctgcttatcatctctctgttttcgacgattcttttggcacaagcaactgatatcctcatagcaaaccagactctaaaagatggagacacc  13666400                           <---------MYB46(3)                           <------MYB46(1)                          <---------AtMYB61                      <---------TOE2(3)                --------->ZAT2                <---------HSFB2a(1)                --------->ANAC58                 <---------ARR11(3)                --------->HSFC1(2)                 --------->ANAC58                 --------->GLK1(2)                <---------HSFC1(2)             --------->ARR11(3)                   --------->ARR11(3)                --------->HSFB2a(1)           <------ZmHOX2a(1)          <------MYB83--------->RVE1(1)                <---------At4g35610        <------ZmHOX2a(1)             <------MYB46(1)                <---------ZAT2          <---------HSFB2a(2)             --------->MYB59      --------                --------->At4g35610     --------->HSFB2a(2)     <---------LBD16--------->ANAC58              <---------PCF2     <-----------GT1<------ZmHOX2a(2)       <---------------AtSPL8           --------->ALFIN1<------MYB83 <---------LBD16    <---------MYB52(1)  --------->ANAC58     <         <---------ZAT2  <--------P     <-----------RAV1(2)--------->DOF5.7(2) --------->ANAC46    <-   attgtttcgcaaggtgggagcttcgaggttggttttttctctccaggaggatcaagaaatcgttatctcggaatttggtacaagaaaatctctctccaga  13666500                                                     ---------->DOF2                                                 --------->TOE2(3)                                                 --------->TOE1(3)                                           <---------TOE1(2) --------------->AGL15                                          <---------LBD16   <-----------------AGL3                                      ==============HOX2a_HOX2a         <--------P                   ------>ZmHOX2a(2)     <-----------------AGL2                  -        <---------ANAC58             ===============HOX2a_HOX2a         --------->At4g35610         <        <-------GAMYB                <------ZmHOX2a(2)     --------->At4g35610                 ------        <---------ANAC58            <---------ARR11(3)    --------->GLK1(2)                  --------   <---------ANAC46         ------>ZmHOX2a(1)<------ZmHOX2a(1)          <---------At4g35610<---------LBD16 ->HSFB2a(2)                ================HOX2a_HOX2a   --------->ARR14(2)              --------->MYB52(1) ---------MYB52(1)          =================HOX2a_HOX2a  <---------ARR14(2)             <---------WRKY18(1) ------GAMYB  --------->MYB52(1)    --------->ARR11(3)   --------->RVE1(1)              ----------->HVH21   ccgttgtttgggttgctaacagagactctcctctctacgatctctcaggaaccctaaaagtatctgaaaatgggagcttatgcctcttcaatgaccggaa  13666600                <---------YAB1              --------->YAB1                                        --------->GLK1(2)              <---------ICU4           --------->ANAC58            <---------ARR14(2)     ----------->RAV1(2)             ---------->DOF2               <---------GLK1(2) -------->bZIP60(1)                --------->LBD16                 --------->ARR14(2) ---------bZIP60(1)   ------>ZmHOX2a(1)--------->ANAC58    <---------ATHB12 --->ARR14(2)--------->ICU4       --------->HSFB2a(2) --------->ANAC58         --------->ANAC46 ->LBD16     <---------YAB1       <---------HSFB2a(2) --------->ANAC58         ----------->GT1   tcacatcatctggtcatcatcatcctcaccatcttcccagaaagccagcctaagaaacccaattgttcagattcttgatacaggtaatttagttgtgaga  13666700                                                  --------->CCA1(2)                                                 <---------ARR14(2)                                                 --------->ARR11(3)                                                 <---------ARR11(3) --------->AHL20(2)               <---------ICU4                    --------->ARR14(2)----------->GT1               <------ZmHOX2a(1)              <------ZmHOX2a(1) <------ZmHOX2a(1)       <---------KAN4(2)                    --------->LBD16  --------->HSFB2a(2)   --------->LBD16                 <---------TOE2(3)         <---------HSFB2a(2)                   <- <-----------RAV1(2)         <------NtERF2 <-----------RAV1(2)--------->LBD16                -------- <---------LBD16    <---------ANAC55(2)    <---------LBD16   <---------LBD16             <-----------GT1   aactcaggggatgatcaggattacatatggcagagtttagattacccaggagatatgtttcttccaggaatgaaatatggtcttaattttgtaaccggtt  13666800  Previous    Next  AGI:  At4g27290.1    Description:  S-locus protein kinase, putative. similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G27300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39094.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39133.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77004.1); contains InterPro domain Apple-like (InterPro:IPR003609); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain S-locus glyco Range:  from: 13666287    to: 13669208    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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