Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                ---------->DOF2          --------->ZAT18          --------->At4g35610    --------->ICU4   <---------------------WRI1                    --------->AHL20(2)                 --------->MYB52(1)  --------->YAB1                            --------->ANAC46               <----------ID1 -------->ANAC58               <---------At4g35610                   --------->ANAC58  <------ZmHOX2a(1) -------->ANAC58               --------->At4g35610                   --------->ANAC58<---------TOE2(3)   ataagcatgatgagcacaaagaaacacaaattgagctcaaaactacacaaaaaaaatggacaatttttcccaagaaaaaaacaaactaaggaactaatgc  13638000                                         --------->ANAC58                                         --------->ANAC58                                       <--------P                                     ----------->GT1                                    <---------------AtSPL8                           --------->AHL20(2)                  <---------ANAC46--------->DAG2                        --------->ANAC46            -              <<<<<<<<<SARD1    ---------->DOF2            --------->ARR14(2)        <---------AHL20(2)              <<<<<<<<<CBP60g----------------->AGL1     <---------HSFB2a(2)   <-----------GT1   -----     --------->AHL20(1)      <---------TOE2(3)          --------->HSFB2a(2)   --------->YAB1---------     --------->ARR11(3)      <---------TOE1(3)<---------ARR11(3)        --------->ANAC58   ----------     <---------ARR11(3)     <-----------GT1   --------->ARR11(3)        --------->ANAC58  --------->MYB59     <---------AHL20(1)   <---------AHL20(2)  --------->GLK1(2)      <-------TEIL   --------->AHL20(2)   attctaaaatattccaaatttcgcataatttaacgaaaggggtaagaaaatctaaaatccagaaccctagatgcaagctataaccatttaattcggtaaa  13638100                                                                                                 ----                                                                                               <-----                                                                                              -------                                                                             <---------LBD16  ------>MYB46(1)                                                                   <------NtERF2            ---------                                                                   --------->ATERF1(1)     <------NtERF2                                                                  <---------RAP2.3(1)      --------->MYB46(3)                                                                  <---------DEAR4(2)      ------>NtERF2                                                                  <---------ATERF1(1)  <---------ATERF1(1)                                                                  ------>NtERF2   --------->GLK1(1)                                                                  <---------ERF1  <---------GLK1(1)                                               <---------ANAC46  <---------ANAC46 --------->ZAT2 ----                                               --------->DEAR3(1)--------->DEAR3(1)    --------->LBD16                                              <------NtERF2      <---------DEAR3(1)    ------>NtERF2                                            <---------DEAR3(1)   <---------RAP2.3(2)  --------->ANAC46                                           --------->At4g35610   <---------RRTF1(3)   <---------ETT(1)       <---------AHL20(2)                  <---------At4g35610   <---------RAP2.3(3) <---------LBD16 ---------->GT1 ----------->GT1          <-----------RAV1(2)    <---------ABI4(1) <---------ZAT2 ---- ----->DOF2  ----------->GT1             ---------->CDC5      <---------DEAR3(1)  --------->At4g35610 >At5g28300<-----------RAV1(2)         --------->TOE2(3)    --------->MYB52(1)    <---------At4g35610 ->GT1 --------->AHL20(2)        --------->ATHB12           --------->ARR14(2) --------->LBD16------>MYB83   aagagtaaattaaacaggtgataaatagaagagactgattacctcagcggcgaggtattcaagaacggcggcgagatagaccggagctccggcaccaaca  13638200            --------->RAP2.6(3)           -------->P     <---------ZAT18                      -------->P     <---------SPL7                       ------>MYB83                                              -    <---------ANAC58                      ------>MYB46(1)                                           <   <------NtERF2                         ----------->RAV1(1)                                        < <---------DEAR3(1)                      --------->MYB52(1)                                         - ----->ANAC58                           --------->AtMYB61                                      ------ ----ALFIN1--------->MYB52(1)          --------->MYB46(3)                                 --------->At4g35610 ->P<---------ANAC58                <XXXXXXXXXXXXXXXXXXXXMIR841B*        --------->HSFB2a(2) <------- >AtMYB61 <-----------GT1          --------->SPL7                        <---------HSFB2a(2) -------- ----->ANAC46                 <---------------------WRI1           ================================== ----->ANAC58    <----------DOF2  --------->CCA1(2) ---------->DOF2<---------------AGL15  <---------At4g35610   cgctcggcgtacttaccggctttcaaaaatcgagcgatacgaccaacagggaattgaagcccagccttgctactacgagaagtagacttcttcgctgcac  13638300                       --------->LBD16                     ================HOX2a_HOX2a                       ------>NtERF2                       ===================HOX2a_HOX2a                      --------->ANAC58                     ------>ZmHOX2a(2)                      --------->ANAC46                    --------->GLK1(1)                      --------->ANAC58                    <---------GLK1(1)                     --------->MYB46(3)                   <------ZmHOX2a(2)                 --------->DEAR3(1)                       ====================HOX2a_HOX2a                 --------->ANAC46                         =================HOX2a_HOX2a <------ZmHOX2a(2)   <---------MYB55(2)                  --------->ARR11(3) --------->CCA1(2) --------->ARR14(2)                    <---------AGP1 -------->AGP1   ----------->HVH21                       <---------ARR11(3) ---------ARR14(2) <---------ARR14(2)                   --------->RVE1(1)                 <---------HSFB2a(1) ---------ARR11(3)<---------ALFIN1                   ---------->DOF2                      --------->HSFB2a(1) -------->ARR14(2)------>NtERF2                 ----------->GT1                  --------->ARR14(2) ----->RAV1(1)   <---------ETT(1)        --------------->AGL15                   <---------ARR14(2) --ZAT14        --------->LBD16          <---------------AGL15                   --------->MYB52(1) < ->ZAT14 ----------------------->TaNAC69(2)    --------->CCA1(2)       <------ZmHOX2a(1)  --------->HSFC1(2) ========================================================MADS_MADS  <------ZmHOX2a(1)     <---------HSFC1(2)   cagatccaagttgttttccccgacccgccatttctctctactacccaagatagaaaaaagatctcttagaggaggatgaagcgtaactgagaaatttctc  13638400                                               --------->AHL20(2)                                             <---------WOX13(1)                                           --------->ATHB12                                          --------->ICU4                                          <---------YAB1                      --------->ARR14(2)<---------ICU4               --------->YAB1          --------->ICU4               <---------ICU4      ------>NtERF2                                     --------->CCA1(2)              <---------ATHB51    --------->ANAC58                  --------->ARR11(3)              --------->ICU4      --------->ANAC46                  <---------AHL20(1)              <---------ATHB12--------->ARR14(2)                    --------->AHL20(1)            --------->YAB1--------->At4g35610<---------YAB1         <---------ARR11(3) ----------->HVH21         --------->YAB1  *TSS <---------ARR14(2)         <---------ANAC58          --------->YAB1      --------->YAB1  <---------ARR14(2)--------->YAB1   <---------ANAC58         <---------ATHB12  <<<<<<<<<WRKY18--------->ICU4   --------->ANAC58       <---------ANAC46  ----------->HVH21 -----------HVH21<---------YAB1  <---------LBD16<---------YAB1 ----------->GT1------------>CBF <-----   tctgtcaaaaataacaataatgagtatcagcgaaacccgccatgatgattaatatagtggcgagatagaaaatatttctgaccaatgatatgacactgca  13638500                                                                  <-------PIF5                                                                 --------->ZAT2                                                                 ----------->RAV1(2)                                                                 <---------ZAT2                                                               <---------ALFIN1                                                              --------->MYB46(3)                                                              --------->RAP2.3(3)                                                       <---------ANAC58                                                       <---------ANAC46                                                       <---------ANAC58                                                    <---------GLK1(2) <------------------------ANAC81                                         --------->bZIP60(1)  --------->DEAR3(1)                                         <---------TGA1a     --------->ATERF1(1)                                         <---------bZIP60(1)<---------ATERF1(1)                                         --------->TGA1a    <---------ZAT18                                         ========================================bZIP_DOF                                         <---------O2 <-------TEIL------->PIF5                       ----------->GT1   <---------ANAC58   --------->PCF2   <----------DOF2                     <------------CBF    <---------ANAC46 <---------ZAT18    <---------------AGL15                <-----------HVH21        ----------->GT1  --------->ZAT18    --------------->AGL15            <---------ALFIN1             <---------ANAC55(2)--------->ZAT18  ------>ZmHOX2a(1) ------       --------->GLK1(2)  <-----------GT1<---------ANAC58 --------->SPL7    <-----------------AGL3  ----------->GT1<---------MYB52(1)      --------->O2--------->GLK1(2)<----------DOF2         <------  ------>ZmHOX2a(2)  <---------GLK1(2)   ========================================bZIP_DOF   <-------- ----AtLEC2 --------->ANAC46             --------->ANAC55(2)<---------PCF2---------->ID1  <----------   tggatcgataatctacaccgtcagattgttacaagtttaagggacgtgatttgagattcgtgcgcccacctgctttgtcctttttttggttctccgatga  13638600                                                                <---------MYB52(1)                                                                --------->DOF5.7(2)                                                               --------->TOE2(3)                                                               --------->TOE1(3)                                                             <---------TOE1(3)        ----------->GT1                                      <---------TOE2(3)               ------>NtERF2 --->ATHB12                    ----------->GT1              <-----------GT1         --------->ZAT6 ---ATHB12                   <---------ANAC58             <---------AHL20(2)      <-----------GT1   - -At4g35610                  <---------ANAC58         <---------AHL20(2)        --------->AHL20(2)  < -----------WRI1    <----------DOF2               <----------DOF2  ----------->RAV1(2)    --------->SPL7   tttcaatggattgttatatgggctatattgggcttgttaaatagaaatactcctttttattttaacgttatctggcccaaaatttaacactgttcggccc  13638700                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                -----                                                                                                <---- <---------AHL20(2)                                                                             ----- --------->AHL20(2)                                                                             ----- --------->AHL20(1)                   <----------DOF2                                          <----- <---------AHL20(1)                <-----------GT1                          <-----------GT1    ------ -------->AHL20(2)                <-----------GT1     ---------->DOF2 ----------->GT1          <----- ---------AHL20(2)             ------->TEIL  --------->YAB1    --------->MYB59     --------------->AGL15   aaataaattgtttcttcacttcttgtacatatgtattttcctttttatcaaaatttcaaagaagttagggagaagttataacttactaagtgttgtaatg  13638800                                                                                                 ----                                                                                                 ----                                                                                                 <---        <---------ANAC58                                                                         <---        <---------ANAC58                                                                    ---------    <---------ANAC58                                                                        ---------    <---------ANAC58                                                                       <--------- --------ICU4                                                                            --------->ANAC58 -------YAB1                                                                             --------->ANAC58 ------>ICU4                                                                       <---------ANAC46 ---->YAB1                                                                        --------->At4g35610 -----ICU4                                                                        <---------At4g35610 ---->ATHB12                                      <-----------GT1                 <------NtERF2  <--- --->HAHB4                       ----------->GT1  --------->YAB1                 <---------MYB46(3) ----ATHB12      --------->ANAC55(2)--------->AHL20(2)--------->At4g35610       <---------RAP2.6(2) --->ICU4<----------DOF2    <-----------RAV1(1)--------->YAB1                <---------AtMYB61  <---- ----YAB1<---------DAG2 <----------DOF2    ----------->GT1         ----------->HVH21   ---------->DOF2   attattgtttgctttttagacgtattctttatgtgggtttaaatttggataataacagttgcaagttgtatgacatattgtggtggctgaaaagccacaa  13638900  Previous    Next  AGI:  At4g27230.1    Description:  HTA2 (HISTONE H2A); DNA binding. Identical to Probable histone H2A.3 [Arabidopsis Thaliana] (GB:O81826;GB:Q8L8Z9); similar to HTA1/RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5), DNA binding [Arabidopsis thaliana] (TAIR:AT5G54640.1); similar to unknown [Populus trichocarpa] (GB:ABK94384.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2A; (InterPro:IPR002119) Range:  from: 13637294    to: 13638425    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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