Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <------NtERF2                                                                       --------->LBD16                                   <---------YAB1                     <---------ANAC58                                --------->ICU4                        <---------ANAC58                             --------->AHL20(1)                      <---------LBD16          <------                             <---------AHL20(2)            <---------WOX13(1)        ---------->DOF2                             --------->AHL20(2)          --------->ATHB12    --------->ATHB12 <------ -AHL20(2)   ----------->GT1--------->AHL20(2)          <---------YAB1<---------ANAC46--------->DAG2   gttcaaagggttttgaagtaaaaaaaaaaaaaaaattatgaagaaacaatattgaatattgattgacatatggcgggagtgatttggaaaagtttttctt  13613200                                              <---------YAB1                                            <---------ICU4                                            -------->HAHB4                                            --------->YAB1                                           --------->ICU4                                           <---------YAB1                                         --------->YAB1                                        <---------YAB1                                       <---------AHL20(2)                                       --------->AHL20(1)                                       --------->AHL20(2)                                     -------                                      --------->YAB1                                         <-------            <---------YAB1            <---------ICU4                                         --------  --------->AtLEC2                   --------->ICU4                                      <----------- ---ANAC58  --------->ICU4           <---------YAB1                                   <---------YAB1 ---ANAC58---------->DOF2         --------->AHL20(2)   ------->TEIL                <---------AHL20(2)   gttcatccaaaataaagattgtagtatcaccttgaagtaattataatgatgactatgtatatcacatttagactatgtatactaatttatgctaataaaa  13613300                                                                                 <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                                 <---------YAB1                                                                                --------->AHL20(1)                                                                                <---------AHL20(1)                                                                                --------->AHL20(2)                                                                                <---------AHL20(2)                                                                               --------->YAB1                                                                          --------->TOE2(3) --->DOF2                                                              ----------->RAV1(1) --AHL20(2)                                 <----------DOF2    <---------YAB1--------->AHL20(2) ->AHL20(2)                        <----------DOF2          <---------AHL20(2)<---------YAB1      --- ----AGL15   <---------ZAT6     ---------->ID1<---------AHL20(2)  <---------WOX13(1)     <-----------RAV1(1)   gattaccacaaattagagttatttgggaaattttgttcttttttggctttaatttcatgtattatatgatagacaacattaatataatttcatgttgttc  13613400                                                                                           --------->ANAC58                                              <---------MYB111(2)                     ------->MYC3                                              --------->MYB46(3)                      <-------MYC3                                   ------>MYB46(1)--------->TOE1(3)                --------->YAB1                                   ------>MYB83------->GAMYB                 --------->ANAC46                                 <---------MYB111(1)     <---------GLK1(2)   --------->ANAC58                                 <---------MYB59  <---------DAG2             --------->ANAC58            ------>ZmHOX2a(1)   --------->ANAC46  --------->TOE2(3)         ------->GAMYB  --------->AtLEC2      <-----------GT1           --------->ANAC55(2)      <---------ANAC58 --------->ZAT14  --------->ANAC58    <-----------HVH21           <---------ANAC55(2)      <---------ANAC58----------->RAV1(1)     <--- ------>ANAC46                  --------->ANAC55(1)   <---------CCA1(2) --------->ANAC46<-------TEIL   acgacttgtcactcctccaatttgagtttcgaacacctaatcgcgacaacaaccttatagcttctctctctcgcacaacacacaatcacatgcatgcaat  13613500                                            --------->ANAC58                                            --------->AtLEC2                                            --------->ANAC58                                            --------->ANAC46                                       ------>ZmHOX2a(2)                                      --------->GLK1(1)                                     <---------ARR11(3)                                  <-------MYC3                                  <-------MYC2                                  ------->MYC3                                  ------->MYC2                                 --------->ANAC58                                 <---------TGA1a                                 --------->TGA1a                                 --------->O2                                 <---------O2                                                   -----                                 --------->ANAC58                                        <---------ZAT14             <------------CBF    --------->ANAC55(1)               <---------ICU4        --------->ZAT14           --------->AHL20(1)    --------->ANAC55(2)              ----------->TBP        <---------ZAT18           --------->AHL20(2)    <---------ANAC55(2)      <---------ANAC58             --------->ANAC46           <---------AHL20(2)    --------->ANAC46         <---------ANAC58          --------->ZAT14--          --------->AHL20(2)     =================================bZIP_DOF   --------->ARR14(2) <---- ------ARR11(3)    <---------AtLEC2  --------->ARR11(3)<----------DOF2    --------->ANAC46<---------ALFIN1   gtcttaaaaaaaaaaaattgtgcatgcattctaacacgtgatctccatgcaaaactcctttcttgtccataaatacccataaccccttcactacactctt  13613600                                                                      <-----------ARR10                                                                     <---------ZAT2                                                                     <---------At4g35610                                                                --------->ZAT18                                                                <---------LBD16                               --------->MYB52(1)               <---------ZAT14                          <---------AHL20(2)              ------>ZmHOX2a(1)                          --------->AHL20(2)       <---------ARR11(3)--------->ZAT2                      --------->AHL20(2)           --------->ARR11(3)--------->At4g35610                    --------->ANAC58             --------->ANAC58 --------->LBD16                ----                    --------->ANAC55(1)    <---------ANAC58     --------->At4g35610              ----  *TSS              --------->ANAC46       <---------ANAC46     <---------At4g35610            ------ ---->ZAT14         --------->ANAC58       <---------ANAC58   <---------DEAR3(1)               ------ ------->ANAC46 --------->ANAC46    --------->MYB46(3)----------------------->TaNAC69(2)      ------- -----ZAT14    <-------TEIL  <---------MYB52(2)  --------->ANAC58--------->ANAC46          ------>ZmHOX2a(1)   cactcaaacaaaaaacatacacaagtaattaactaacaacaaatggcgaacaagctcttcctcgtctgcgcagctctcgccctgtgtttcatcctcacca  13613700                                                  ------->GAMYB                                                -------->P                                             <---------MYB52(2)                                            --------->ANAC58                                            --------->ANAC58                                         ------>NtERF2                                        --------->bZIP60(1)                                        --------->TGA2(1)     --------->LBD16                    <---------bZIP60(1)    <---------ANAC58                    --------->ANAC58    <---------ANAC58                    --------->ANAC46    <---------ANAC46                    --------->ANAC58 -->MYB83                             <---------TGA2(2)                                             - -->MYB46(1)                       --------->At4g35610                                              - --->DEAR3(1)                      <---------At4g35610                                          ----- --->AtMYB61      <---------MYB52(1) ----------->TGA1     ----------------->AGL2<------ZmHOX2a(1) <-- -->MYB46(3)     <-------GAMYB  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <-----------HVH21       -----   acgcttccgtctatcgcaccgttgtcgagttcgacgaagatgacgccagtaaccccataggcccaatacagaaatgtcagaaggagtttcagcaagacca  13613800                                                       <---------MYB46(3)                                                      <---------AtMYB61                                                    <---------MYB46(3)                                                   --------->ALFIN1                                                   <---------AtMYB61                                                   <---------DEAR3(1)                                                --------->ALFIN1        <---------ANAC58                       <-------PIF5        <---------ANAC58                       ------->PIF5      <---------ARR11(3)                      <---------bZIP60(2)      --------->ARR11(3)                    <------ZmHOX2a(1) --------->TOE1(2)                 <-----------RAV1(1)--------->ALFIN1 -------->ANAC58             --------->ANAC46 <---------ANAC58                                   <--- -------->ANAC58             --------->ANAC58 <---------ANAC58                                   ---- ---->ANAC58                 --------->ANAC58 <---------ANAC46                            --------->ANAC58 -------ALFIN1           --------->ANAC58 --------->ANAC58        ----------->HVH21       --------->ANAC58 ---->ANAC58             --------->ANAC58 --------->ANAC58  ------>ZmHOX2a(1)             --------->ANAC46   gcacctaagagcttgccagagatggatgcgcaagcaaatgtggcaaggacgtggtggtggtccttccctcgacgatgagttcgatatggaagacgacatc  13613900                 --------->At4g35610     <---------ZAT2                                             <            ----------->HVH21          <---------ZAT18                                             <-            --------->ANAC58      --------->At4g35610                                              <-            --------->ANAC58      <---------At4g35610                                  --------->ZAT2     --------->LBD16              <---------ZAT14                                      --------->At4g35610    --------->ANAC46          --------->ALFIN1                             ------>NtERF2          <--   <---------LBD16       --------->LBD16 --------->ZAT2                   <---------ALFIN1------>NtERF2 --------->ARR14(2)     <---------HSFB2a(2)                            --------->PCF2  <---------ZAT2 <---------ARR14(2)     --------->HSFB2a(2)                      <---------ANAC58      <---------At4g35610 ------HSFB2a(2) <---------At4g35610 <---------At4g35610         <---------ANAC46     --------->ANAC58 ----->HSFB2a(2) <---------ZAT2--------->At4g35610               <---------ANAC58     --------->ANAC58   gagaacccgcagagacgacagctactccagaagtgctgcagcgagcttcgccaagaagagccagtttgcgtttgccccaccttgagacaagctgccaagg  13614000                          --------->MYB46(3)                         ------>MYB46(1)                         --------->MYB52(1)                         -------->P                         ------>MYB83                       <---------MYB111(1)                       <---------MYB55(2)                       --------->DEAR3(1)                       --------->MYB46(3)                       --------->AtMYB61                       <---------MYB111(2)              --------->At4g35610               --------->ANAC58                         <---------ZAT2           ----------->HVH21      --------->ANAC58      <---------At4g35610         --------->LBD16--------->MYB55(1)              --------->ZAT2                            <--        <---------LBD16<---------MYB46(2)           --------->ANAC46                           <----- ---------MYB52(1)  --------->REM1(1)          <-----------GT1  <---------ANAC58               <----- ------GAMYB   --------->ANAC58   --------->ANAC58 --------->ANAC46                          <------- --------RAP2.6(3)----------->RAV1(1)   <------ZmHOX2a(1)       <---------ANAC58       --------->ANAC58 -------MYB46(3)--------->At4g35610    ----------->GT1  <------NtERF2<---------MYB59   --------->ANAC58   ccgttagattccagggacagcaacaccaaccagagcaagtcaggaaaatttaccaggcagctaagtacttgcctaacatttgcaaaatccagcaagttgg  13614100  Previous    Next  AGI:  At4g27170.1    Description:  2S seed storage protein 4 / 2S albumin storage protein / NWMU2-2S albumin 4. Identical to 2S seed storage protein 4 precursor (AT2S4) [Arabidopsis Thaliana] (GB:P15460); similar to 2S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2 [Arabidopsis thaliana] (TAIR:AT4G27150.1); similar to Napin-B precursor (1.7S seed storage protein) [Contains: Napin-B small chain; Napin-B large chain] (GB:P27740); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional trypsin/alpha-amylase inhibitor (InterPro:IPR013771); contains Inte Range:  from: 13613602    to: 13614289    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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