Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                         --------->AGP1                         --------->ARR11(3)                         --------->ARR14(2) --------->ZAT18                --------->ARR14(2)          <---------ZAT18                                --------->ANAC58                <---------ARR14(2)         <---------ANAC58                              --------->MYB52(1)           ----------->RAV1(1)     ---------->DOF2                          <-----------GT1--------->ANAC58         --------->At4g35610 ------>ZmHOX2a(1)     --------->YAB1 ---------->DOF2       <---------SPL7         --------->ZAT2  <---------ARR14(2)<---------ANAC58     --------->ANAC58    ----------->HVH21         <---------ZAT2  <---------GLK1(2)--------------->AtSPL3--------->ANAC46 ------>MYB83         <---------At4g35610--------->TOE2(3) --------->SPL7    --------->ANAC58 ------>MYB46(1)  ---------->DOF2        <---------ARR11(3)<---------ANAC46  --------->TOE1(2)  --------->WOX13(1)   tttctaaagtcagcagcaaattcgacagatcctaaacaaaagctagcgtacaatcttcagggacatacgaaagacgatataccaatctgacgaacgaaaa  13606100                                   --------->YAB1                                  <---------ATHB12                                              -----                           ------>ZmHOX2a(2)                                                   ------                  <---------AHL20(2)                                                           <-----      ------->GAMYB<---------AHL20(2)                                                     -----------     --------->MYB46(3)  --------->ARR14(2)                         ---------->DOF2--------->ANAC58     <---------MYB52(2)  <---------ARR14(2)                --------->MYB52(1)      --------->ANAC58 <---------ATHB12 --------->AHL20(2)              --------------------->WRI1       --------->ANAC46 -   caaatcaacaaactccaaaattatatggatcgggcaatgaaaacaaacttcacctcgaaattaccgaaatcaaagaaatagcaaaacgcaatttgtgaaa  13606200                                                                              <---------ICU4                                                                              --------->ATHB12                                                                             --------->ICU4                                                       --------->DAG2        <---------YAB1                                                  ------>ZmHOX2a(2)      ------>ZmHOX2a(2)                                                <---------ARR14(2)      <---------At4g35610                        --------->YAB1      ----------->RAV1(2)        --------->ARR14(2)                       <---------ATHB12     --------->ANAC55(2)        <---------ARR11(3)                  --------->ANAC58          ----------------->AGL1     <---------ARR14(2)           <----------ID1 --------->At4g35610   --------->ARR14(2)     <---------AGP1 ---->ARR14(2)    --------->ANAC46    <---------ARR11(3)          <---------ANAC46 --->GLK1(1)      --------->ANAC58    --------->ARR11(3)          <---------ANAC58                <-- ----GLK1(1)    --------->MYB52(1)  ----------->ARR10 ---------->DOF2 <---------CCA1(2)           <-- >GT1    --------->At4g35610      --------->CCA1(2) --------->LBD16<---------LBD16                --- -------->At4g35610  --------->WOX13(1)   <-----------GT1         <---------ANAC58                ---   tctgcttaagaagatgacaaacgcaatcagaagaagataagattttacctgatccgaaaagtagagtttcgtggatctgataattggagaagagagaacg  13606300                                                <---------ANAC58                                                <---------ANAC46                 <---------ARR11(3)                                               <------NtERF2 --------->YAB1      --------->ARR11(3)      --------->TOE1(3)                       ------>NtERF2 --------->ICU4----------->GT1      --------->TOE2(3)                      <---------DEAR3(1)<---------YAB1   --------->CCA1(1) -------ZAT2                                 --------->ALFIN1<---------ICU4<------ZmHOX2a(1) -------At4g35610                   <---------MYB52(1)     --------->AHL20(1)   --------->RVE1(1) ------>At4g35610   --------->DAG2 <-------GAMYB<---------ANAC58     <------ZmHOX2a(1) ------>ZAT2       ---------->DOF2<-----------RAV1(1)     --------->YAB1 ----------->GT1   agctgaaaccctaaattcggataaagtctgcaacttctgttgtttcggtggcgagaacaaaaataatgagaggaagaggaaaatatcgtcgtttttgtct  13606400                                  --------->AHL20(2)                                  <---------AHL20(1)                          <---------CCA1(1)                          <---------RVE1(1)                                       --------->ARR11(3)                         <---------ARR11(3)                               --------->MYB52(2)                         --------->ARR11(3)                            <---------MYB52(1)                    <----------DOF2         <---------AtLEC2          --------->LBD16               <----------DOF2    <---------AHL20(2)                 <---------ANAC46               <---------DAG2 --------->AHL20(2)                    <---------LBD16--------->GLK1(2)          <---------At4g35610 <---------AHL20(2)      *TSS       <---------GLK1(1)<---------ARR11(3)      <----------DOF2   <<<<<<<<<RAP2.2  <-----------GT1  <---------ZAT2<---------MYB52(1)   --------   cacagtctctttagcagcttttctttagatatttattttattttttccatggatagagagagctaggcattccggttatttggagattttggaatttcaa  13606500                   <---------AHL20(1)                   --------->AHL20(2)              --------->AHL20(2)              <---------AHL20(1)        <------MYB46(1)        <------MYB83       <---------AtMYB61       --------->MYB111(1)              --------->MYB52(1)                        <------MYB46(1)       --------->MYB59               --------->ANAC58                             <------MYB83       --------->MYB46(2)  ------------>CBF                             --------->ARR14(2)     <---------MYB52(1)   <-----------GT1                               <---------ARR14(2)        <--  <---------RAP2.6(2)   <---------AHL20(2)      <----------DOF2    <---------ANAC46              <--- <---------LBD16   <---------AHL20(2)--------->ANAC46             <---------DEAR3(1)           <----- ---->CBF     <---------AHL20(2)     --------->ANAC58   <---------MYB46(3)       --------->MYB59 ----   ttttgcggtttggtattttattttattttatcaatttgaacgaaacagagctttgttttggttacgatgcggtggattttggttcggtttagagtgatat  13606600             --------->AHL20(2)          ------>MYB46(1)          ------>MYB83        <---------MYB59   <------MYB83                  --------->At5g28300   <------MYB46(1)     --------->ARR14(1)  <---------------AtSPL8        ----------->GT1  --------------->AtSPL8<-------TEIL  --------->MYB59     --------->ARR11(1) -------AHL20(2)      --------->ARR14(2)                                                       ------ ------AHL20(1)       <---------ARR14(2)                                                    --------- ------------AGL3     <---------GLK1(2)                              --------->ICU4<---------AHL20(2) ----->AHL20(1)     ----------->ARR10                  <-----------GT1      <---------ZAT6  <--------   atatttggtaccaaattaaaccaagattcgttttcggtaaaaacaaaatttgatttttaagcatttttggaaaaattagtgttatatatatgagatttct  13606700     <---------ARR11(3)     <-----------ARR10     --------->ARR11(3)                                                  ------>MYB83    <---------GLK1(2)                  --------->DAG2                    ------>MYB46(1) --------->YAB1       <----------DOF2 ---------->DOF2   <---------YAB1  ----------->RAV1(1) --->TOE2(3)    <-----------GT1<---------MYB46(3)    ------->TEIL      ------->GAMYB<---------AHL20(2) >GLK1(1)   <----------DOF2   <--------P        <---------ANAC46      --------->MYB46(3) -GLK1(1)   <---------DAG2 <---------ZAT6  ----------->GT1    --------->TOE2(3)  ------->TEIL   taatcaaaatctcacttttatccgatttagtggtagttcataaagtggtttcatgtatatgatacctgaataaccaacatatgtattttaagagacactt  13606800                                                               <------ZmHOX2a(1)               <---------ARR11(3)                             --------->ZAT18              --------->CCA1(1)                             <---------At4g35610              --------->RVE1(1)                         <-----------HVH21     -------->HAHB4                                     --------->TOE1(2)     --------->YAB1                                    <---------TGA1a     <--------ATHB1                                    --------->TGA1a     <---------ICU4                                    <---------ANAC55(2)    <---------ATHB51                             --------->At5g28300    --------->ICU4    <---------MYB111(1)     <---------At5g28300    <---------YAB1 ------>ZmHOX2a(1)       <-----------HVH21--------->At4g35610--------->MYB46(3)  --------->YAB1  <---------MYB59   <---------TOE2(2)  --------->O2         <-----------GT1 --------->ICU4--------->ARR11(3)  <---------MYB52(1)  <---------O2       <-----------HVH21  --------   ggaataataattctaaatatcctaactactcgtgtccgtatgttttgtcacggtgaaacgtgagaggactagtttttgtcacccgtccataacattctta  13606900                                                                                                -----                                                                                             <-------                                                                                         <---------ANAC58                                                                                         <---------At4g35610                                                                                         --------->At4g35610                                                                                         <---------ANAC58                                     <----------DOF2                                    -------------                                   <---------YAB1                                     --------->WRKY12                             <---------TOE2(3)<---------ARR11(3)                      --------->WRKY38(1)                             <---------TOE1(3)--------->ARR11(3)                      ----------->HVH21         <----------DOF2 --------->TOE2(3)   <---------CCA1(2)                       <-----------HVH21  <-------TEIL   ----------->GT1 <---------CCA1(2)                      <---------ARR11(3)   <------- ->TOE2(3)     ----------->GT1<---------At4g35610         --------------->AGL15  ------->TEIL<-------   gacatacattactttgggagtgaaaaacattaagcttatctttatccatatattgtcttaccatcaatagacaatatccaatggaccggtgacctgcgtg  13607000  Previous    Next  AGI:  At4g27130.1    Description:  eukaryotic translation initiation factor SUI1, putative. Identical to Protein translation factor SUI1 homolog 1 [Arabidopsis Thaliana] (GB:P41568;GB:Q9SLK5); similar to eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana] (TAIR:AT5G54760.2); similar to eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana] (TAIR:AT5G54760.1); similar to Protein translation factor SUI1 homolog (Translation initiation factor nps45) (GB:Q9SQF4); contains InterPro domain Eukaryotic translation initiation factor SUI1; (InterPro:IPR005874); contains InterPro domain Translation initiation factor SUI1; (InterPro:IPR00 Range:  from: 13604564    to: 13606454    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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