Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->TOE1(2)                                       --------->TOE2(2)                                       --------->TOE2(3)                            --------->ARR11(3)                                       --------->DOF5.7(2)                            --------->ARR14(2)                                  --------->DEAR3(1)                            <---------ARR11(3)                         <---------WRKY45--------->MYB52(1)                            <---------ARR14(2)                         <---------WRKY12<---------DOF5.7(2)                           --------->GLK1(1)                           <---------WRKY38(1)       <---                           <---------GLK1(1)                   <---------ZAT14  <---------DEAR3(1)         <-------TEIL--------->CCA1(2) --------->TOE1(3)       --------->ZAT14  <---------ETT(2)----- <---------ICU4 ---------->DOF2  --------->YAB1--------->AHL20(2)     --------->WRKY18(1)<----------ID1   tcatcaatacatacatgataaagagatggaaatcttcataacctaagaatgaaataaacttactctgttctggtcaacaacgtcgacgataacgacgagc  13594900                                                                                    --------->ICU4                                                                                    <---------ARR11(3)                                                                                    <---------AHL20(1)                                                                           --------->YAB1                                                                          <---------ATHB12                                                                          --------->MYB46(3)                                                                         ------>MYB46(1)                   --------->ZAT18                                       ------>MYB83              --------->LBD16                                           --------->WOX13(1)       ------>ZmHOX2a(2)                         ------->TEIL         --------->MYB46(3)     <---------ARR11(3)                  ------>ZmHOX2a(2)           --------->ANAC58            ----     <-----------ARR10                  <------ZmHOX2a(2)            --------->ANAC58    <---------AHL20(2)     --------->ARR11(3)                --------->ARR14(2)          --------->MYB46(3)   --------->AHL20(2) -------DOF2<---------LBD16            <---------ARR14(2)    --------->TOE1(3)      --------->ARR11(3) ---->HSFB2a(1)    <---------ZAT18   --------->LBD16         --------->TOE2(3)      --------->AHL20(1)   tttccatgatcttctccgtagttcacaagtgctactctcccgatctcaacgtacctcttgaaaccctaaacaaccaatcaccagaaaatattaaatctaa  13595000                                                                                ---------->DOF2                                                                          <---------HSFC1(1)                                                                          <---------HSFB2a(2)                                                                         ------>ZmHOX2a(2)                                 --------->ATHB12                       --------->CCA1(2)                                <---------YAB1                          <------ZmHOX2a(2)                         --------->YAB1                                --------->AGP1                         --------->ANAC58  --------->TOE2(3)           <---------AGP1<---------GLK1(1)                         --------->ANAC55(1)                           <---------ARR14(2)                         --------->ANAC55(2)                           --------->ARR14(2)                         --------->ANAC46 ----------->GT1              <---------ARR11(3)                         --------->ANAC58 --------->ANAC58             --------->ARR11(3)                         <---------ANAC55(2)   ---------->DOF2        --------->RVE1(1)                         ----------->GT1  --------->ANAC58         ---------->DOF2   --------->GLK1(1) ----->MYB46(3)    --------->ANAC46<---------WOX13(1)      --------->LBD16--------->HSFB2a(2)   caactttggactctaacctatacacaaacgtaacttgattgagaacgtcaaaagcctaatccccaaaaaaaaagatctagaagaaagaaatccgaaatgt  13595100                                                                                                    <                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                               --------->ANAC55(2)                                             ------                        <---------ARR11(3)               <---------ARR11(3)     --------->ARR11(3) <-                        --------->ARR11(3)             <---------TOE2(3)        <-----------ARR10----                     <------ZmHOX2a(1)              --------->MYB46(3)          <---------ARR11(3)<--          --------->At4g35610  <---------ANAC55(2) -------->P  --------->At4g35610  <-----------GT1--          ----------->GT1      <---------ANAC46   --------->MYB52(1)           <---------CCA1(2)-----    ------->TEIL  <-----------RAV1(2)           <---------MYB52(2)         ----------->GT1    <------   gctatgaacatgagctaaatacaggagataatcacgtagaacacagacgaactaaccaaggtattagctcaataagagagtatatctcaccattttcgcc  13595200  <--------P <---------MYB52(1) ---------DEAR3(2) ----->ABI4(1) ------ATERF1(1) ---->DEAR3(1) -----ATERF1(2) ---->ATERF1(2) ---->RAP2.3(2)                                           *TSS -----DEAR3(1)                                        <------ZmHOX2a(1) --->ORA47(2)                                        ----------->GT1 --->ATERF1(1)                                     --------->At4g35610 --->RAP2.3(1)     <---------ZAT2               <---------ZAT14 --->DEAR4(2)<-----------ARR10                  --------->At4g35610 --->ERF1    <---------ARR11(3)                 --------->ZAT2 --------ATERF1(2) --------->ZAT2               <---------ZAT2            <---------ZAT18 -->NtERF2  <------MYB46(1)<---------ZAT6       <---------At4g35610       --------->ZAT18 ----NtERF2 <------MYB83--------->LBD16        ----------->RAV1(1)  <------MYB46(1)     --------->YAB1 ------->ATERF1(2) --------->At4g35610        <-----------RAV1(2)   <------MYB83<-----------TBP ---->RAP2.3(3)    <---------At4g35610      ----------->RAV1(1)    --------->MYB59     XXXXXXXXXXXXXX ---RAP2.3(1)--------->ARR11(3)            ----------->HVH21       <---------TOE2(3)<---------AHL20(2)   gccggtagattggaaggtctaagctccgagtgtaaatgtagacgagcgacagcagaggaaaaaatcgattaggttttgcactatatataatcttcattct  13595300                                                            ----------------->AGL1                                                            --------------->AGL15                                                            <---------------AGL15                                                           <-----------------AGL1                                                           ----------------->AGL2              <-----                                                           ----------------->AGL1             <------                                                           <-----------------AG        <------NtERF2                  <---------ARR14(2)                     --------->ANAC58             ------>NtERF2                 <---------CCA1(2)<---------ICU4   --------->TOE2(3)                 <---------ANAC46         <---------ANAC46     --------->AHL20(2)----------->RAV1(1)   ---------->DOF2--------->DEAR3(1)      <---------TOE2(3)       <---------AHL20(2)<---------ALFIN1   ----------->GT1   <---------DEAR3(1)    <---------ANAC46 <----------DOF2     ---------->DOF2 --------->ANAC58       --------->MYB52(1) XXXXXX>MIR2111A/B--------->ARR14(2)    ---------->DOF2  --------->ANAC46 ----------->GT1  <---------   agggttttgtggtttgggcctatctttactaaataaatatcacaaaggcccaacattaaacgcccaatatggtaaagagagaaaacggcgtcgttttatg  13595400                                                                                                   --                                                                                                   --  <---------RVE1(1)                                                               <---------HSFB2a(1)  <---------CCA1(1)                                                               <---------HSFC1(2) <XXXXXXXXXXXXXXXXXXXXMIR865-3P                                     <---------ZAT14    <-------GAMYB ------RAV1(1)                                            --------->AHL20(2)      --------->HSFC1(2)< ---TOE2(3) ----------->GT1                           ----------->GT1   ----------->HVH21 --------->MYB52(2) -DOF2   <---------LBD16---------->DOF2 <----------DOF2----------->GT1  --------->ALFIN1<---------MYB52(1)   ttggatatttttgggggaaaaaaaaaaaaagacacagtgtctctttcatgtggaagaagataaattagagagaagtgatggagaaactccgttatttgtg  13595500                                              --------->LBD16                                       <---------ICU4                                    <---------ICU4                                    --------->YAB1                                   <---------ATHB12                                                --         <------------CBF        --------->WOX13(1)              --------->ANAC58            <------ZmHOX2a(1)    --------->MYB46(3)         ------------>CBF    ---------->DOF2 *TSS                     ---------  ----------->RAV1(1)     --------->At4g35610--------->HSFB2a(2) --------->ANAC46      ----------->HVH21 ------->ANAC58           --------->ZAT2    <---------LBD16--------->YAB1              --------->ANAC46 ------->ANAC58           <---------At4g35610<---------HSFB2a(2) --------->ANAC58  --------->CCA1(2) ------NtERF2             <---------ZAT2 --------->At4g35610 --------->CCA1(2) <---------WOX13(1)----   gaggcaacaactattgtgtaatgagaccagctcatcaatcatcatctccagaaaaaaggaatgatacaagaaacttagttgatagatagacgacaggaaa  13595600     --------->ANAC58     --------->ANAC46     --------->ANAC58   --------->CCA1(2)  --------->ARR14(2)            --------->GLK1(2)                      <---------PCF2  <---------ARR14(2)        --------->DAG2                        --------->ZAT2 ------->AHL20(2) --------->TOE1(3)                        <---------At4g35610 -->GT1   ---------->DOF2  ---------->DOF2        --------->ANAC46<---------ZAT2           <--------- ----->AHL20(2)   --------->TOE2(3)    <----------DOF2     --------->At4g35610   <---------GLK1(2)   ataatatacgcagaaagaaacctaaaaaaaaaagtttctgtctttagactccaatccactaagctccaagctgggtccccttaaattctcaatctttttc  13595700                                                                          ---------->DOF2                                                                       <------ZmHOX2a(2)                                                                      --------->ARR14(2)                            --------->ATHB12                          <---------ARR14(2)                            <---------ICU4      --------->At4g35610 --------->LBD16                       <---------WOX13(1)     ------>ZmHOX2a(2) --------->PCF5                     --------->ATHB12       --------->ARR11(3)  --------->ATERF1(1)            --------->AHL20(2)       <---------WOX13(1)         --------->SPL7            <---------AHL20(2)     --------->ATHB12            <---------ATERF1(1)    <----------DOF2          <----------DOF2--------->YAB1     <---------ARR11(3) <---------PCF5    ------->TEIL -DOF2   --------->TOE2(3) <---------YAB1 ------>ZmHOX2a(2)   ----------->HVH21 <---------CCA1(2)   tccctaaatttcctttaatttcttcattgatcattgctcattgatcgatcttctgagttttgaggggaccccgatccaaagtgtatctctttctgttttg  13595800  Previous    Next  AGI:  At4g27090.1    Description:  60S ribosomal protein L14 (RPL14B). Identical to 60S ribosomal protein L14-2 (RPL14B) [Arabidopsis Thaliana] (GB:Q9T043); similar to 60S ribosomal protein L14 (RPL14A) [Arabidopsis thaliana] (TAIR:AT2G20450.1); similar to unknown [Populus trichocarpa] (GB:ABK94606.1); contains InterPro domain Ribosomal protein L14; (InterPro:IPR002784) Range:  from: 13593911    to: 13595258    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g27100.1    Description:  RAB GTPase activator. similar to RAB GTPase activator [Arabidopsis thaliana] (TAIR:AT5G54780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39011.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) Range:  from: 13595567    to: 13598571    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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