Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 ------>ZmHOX2a(2)                              --------->At4g35610                              <------ZmHOX2a(2)                              <---------At4g35610                             <---------AGP1                             ------->TEIL                             --------->ARR14(2)                             --------->GLK1(2)                             <-----------ARR10                          --------->ANAC55(2)                                                      --                          <---------ANAC46                                                  ------>ZmHOX2a(2)         <---------MYB46(3)  <---------ARR14(2)                                      --------->DEAR3(1)      <---------ANAC58    <---------ANAC55(2)                          <---------MYB52(1)  ==========      <---------ANAC58   <---------LBD16                              <-----------HVH21    <------ZmHOX2a(2)  ------>ZmHOX2a(2)     --------->MYB52(1)                          --------->DEAR3(2)    --------->ARR14(2) -------->ARR11(3)    <----------DOF2                      --------->ICU4           --------->DEAR3(2) -------->ARR14(2)   <---------ANAC58                 --------->ANAC55(2) <---------MYB52(1)========= ---------ARR14(2)   <---------ANAC58               <---------ANAC46<------------AtMYB77  <---------ARR14(2) ---------AGP1       <---------ZAT6         ----------->RAV1(2)     --------->MYB46(3)--------->LBD16   tggatctagcgttgttgattctagcgttacggatctgagccagagcccctggtttcatgtaacgatggaaaccgtcgtttcttctcaccggcgatctgga  13539300                                                                                            ---------                                                                                        <---------ANAC58                                                                                        <------MYB46(1)                                                  <---------LBD16                       <---------ANAC58                                  --------->TOE1(2)                          <---------TOE2(3)           <---------REM1(1)     --------->At4g35610                  <----------DOF2   <------MYB83           <---------ANAC46      <---------At4g35610             <---------ATERF1(1)   --------->MYB55(2)      --------->YAB1           <---------PCF2   <---------WOX13(1)  <----------DOF2    <---------MYB46(3)   <----------DOF2    <---------ARR14(2)      --------->ATHB12  <---------DEAR3(1)    --------->ALFIN1 ------->GLK1(2)     <------ZmHOX2a(1)       <---------YAB1     <---------RAP2.3(3) --------->ALFIN1 ===========================HOX2a_HOX2a    <------ZmHOX2a(1)  --------->ALFIN1     <------ZmHOX2a(1)- ===========================HOX2a_HOX2a---------->DOF2<---------ARR14(2)   ---------->DOF2  ---------   gattcctttcatggtgtagaagaggattgtgagggacctgagaaaggatgattggggaaacgaaggggggctctttgtaaaggaaggagtgggtgtgatg  13539400                                                                                       --------->TOE1(2)                                                                                      --------->HSFB2a(1)                                                                                     <---------TOE1(2)                                                                                     ------->TEIL                                                                                     <-------TEIL                                                                                     --------->SPL7                                            <---------YAB1                           <---------TOE2(2)                                           --------->AHL20(2)                      --------->TOE1(2)                                   <------NtERF2                                   --------->TOE2(2)                                   ----------->GT1                                <---------ANAC58     <------NtERF2                --------->LBD16                                 <---------ANAC55(2)    --------->LBD16               ----------->GT1                                 --------->ANAC55(2)    ----------->GT1              <---------ANAC46                                 <---------ANAC58   <---------ANAC46             <---------LBD16                                  <---------------AtSPL3  <---------LBD16          <---------HSFB2a(2)    <---------TOE1(3)              <------------------- -->HVH21                  --------->HSFB2a(2)    <---------TOE2(3)              <-------TEIL      -- -------->ALFIN1       <---------ARR14(2)  <---------AHL20(2)                --------->ANAC46      <- >ALFIN1               --------->GLK1(1)  --------->AHL20(2)       <---------ANAC55(2)<---------HSFB2a(1)   gagaggcgggaaaactggaattgggaattcgagaggcgggaaaattaaaattaaggttttgttttgaataagtaagaatacgatacgtacgttcgataac  13539500                                                                           --------->KAN4(2)                                                                          <----------TaMYB80                                                                          --------->KAN4(1)         <                                                                          <---------KAN4(1)        <-                                                             <---------AHL20(2)                  <---                                                          <---------MYB46(3)                     ----                                                 --------->AHL20(2)       --------->GLK1(1)      ----                                                 <---------AHL20(2)      <---------ARR14(2)     <----       --------->LBD16                       --------->AHL20(2)          --------->ARR14(2)    ------       ------>ZmHOX2a(1)                     <---------AHL20(2)       <---------ANAC46      --------- ----TaNAC69(2)---------->DOF2              --------->AHL20(2)      <-----------HVH21--------->TOE2(3) ------->At4g35610                      <-------TEIL    <---------MYB52(1)<---------GLK1(1)<--------- --------At4g35610                  <---------TOE1(2)  ----------->GT1--------->ETT(1) --------->AHL20(2)   cagctaatcctgaaacttaaaccggtgtattccaatccctggttcatttaattaaaccggtgattaatcgggtcggatattcttccacattaaatacccg  13539600         <---------ARR14(2)         --------->ARR14(2)         <---------GLK1(2)         <-----------------AGL1    <-----------HVH21         <---------At4g35610  --------->LBD16             --------->At4g35610 ---------LBD16               <---------ZAT2 --------DOF5.7(2)        <---------DEAR3(1)                            <---------YAB1 ------MYB52(1)          --------->SPL7                                 <---------ANAC46 ----->DOF5.7(2)       --------->LBD16                                <---------ANAC46 ------->HVH21         <---------SPL7           *TSS                <-------GAMYB -------HVH21        ------>ZmHOX2a(2) <------------CBF             <---------ZAT14               >>> --->ANAC46          <---------LBD16  --------->ATHB12       <---------HSFB2a(2)          --------->TOE2(2) >MYB52(1)   <----------DOF2  --------->ZAT2   ------------>CBF    --------->ALFIN1       --------->TOE1(2) --GT1--------->ETT(1)<---------HSFB2a(2) <---------LBD16    --------->HSFB2a(2)        <------ZmHOX2a(2)   ttaccgggtcggattctttttgatccggacggagcagactcgattggggaacaattcattcttctgggtgtgttgtgtttgagtttttggatcatacgaa  13539700                                                 <---------KAN4(2)                                             --------->LBD16                                            <---------ANAC46               --------->GLK1(2)            <---------ANAC58               --------->ANAC58             <---------ANAC58          <------NtERF2                     <---------LBD16         --------->LBD16                   <---------LBD16         ------>NtERF2                  --------->CCA1(2)         <---------MYB46(3)             <---------GLK1(1)        <---------ANAC46               --------->ARR14(2)       <---------LBD16                 <---------ARR14(2)                                           <  <---------GLK1(1)  <-----------HVH21 <---------GLK1(2)                                            < >>>>>>TBF1    --------->ANAC58      ----------->ARR10                                  ----------->GT1   gaagaaatcggcgggagaagctatgtcgaggctatgggcgagatttgcgggattgttcagtagcaagagttttatcggagtagacaagactggtaacaag  13539800                                                                           <------------------------ANAC81                      <---------LBD16                                   <----------DOF2                     --------->MYB52(1)                              --------->GLK1(2)     --------->HSFC1(1)      <---------DEAR3(1)                      --------->ARR11(3)     <---------HSFB2a(2)  <---------ARR14(2)                         <---------ARR11(3)     --------->HSFB2a(2)  --------->ARR14(2)                        --------->CCA1(1)    ----------------->AGL1<---------GLK1(2)                   ------>ZmHOX2a(1)    <---------LBD16 ----------->HVH21            -------->P  --------->TOE2(3)             <--------- ----------DOF2    <---------WOX13(1)            ------>MYB83--------->TOE1(3)            <---------TOE2(3) ---------DAG2 <------ZmHOX2a(1)<---------ANAC46 ------>MYB46(1)    --------->RVE1(1)  <---------WOX13(1)   tacttttccagaatggaggagattgacggattcggcgagtattgttcttccaacctcttatttccttaaaaaatctttttttttgtttgatttatgttgg  13539900                        ------->TEIL           --------->LBD16          <---------ANAC55(1)          <---------ANAC58                                                                         <-          --------->ANAC55(2)                                                                      --          <---------ANAC55(2)                                        <---------SPL1(1)            <--          ----------->GT1                                           <---------SPL1(2) <---------ZAT2          <---------ANAC58                                          <---------SPL7    --------->At4g35610  <------MYB83         <---------CCA1(2)                        <-----------GT1       --------->ZAT2  <------MYB46(1)    --------->ANAC55(2)                    <<<<<<<<<MYB2         ------->TEIL  <---- --------->MYB59  <---------AHL20(2)         --------->At4g35610------------------>SPL14    <-------- --RAV1(1)<---------ANAC46     <---------AHL20(2)      <----------DOF2--------->SPL7  <---------At4g35610   aatttggttattgcgtgaaatttatgtatctcttaaatttgtcaagttgctgaatttctttggttttctccgtacgatttgatgaatcagctgtctttgc  13540000                --------->ANAC58 --------ARR14(2)                      <---------YAB1 ------->ARR14(2)                    <---------AHL20(2) -------CCA1(2) --------->ANAC58     --------->AHL20(2)                                        ------ -----AtLEC2  --------->ZAT14       --------->AHL20(2)              <---------At4g35610        <----- --DOF2       ---------->DOF2----------->GT1          ---------->DOF2    <----------DOF2    <-------TEIL   atatcgcgagttgcagtgaagcaaatggatttagaaaaattaatatcgtattgttttaaagaacattgtctgcttcttttcatacatgaaaagattcagc  13540100                                                                                         <---------AHL20(2)                                                                                         --------->ARR11(3)                                                                                         --------->AHL20(1)                       --------->MYB52(1)                                                <---------AHL20(1)         <---------ANAC55(2)                                                       ----------->GT1         ----------->GT1     ----------->GT1                                       <---------ZAT6 --->At4g35610       <---------MYB52(2)                                --------->GLK1(2) --------->AHL20(2) ----At4g35610     ------->TEIL       <---------At4g35610          --------->HSFB2a(2)   <---------ARR11(3)   taagtgtgatcatgtaaaatgaaactaacagaggttatttagatgatcaaaacgaatattaagactcttgtagaatccatttgtagagtaatatattctg  13540200  Previous    Next  AGI:  At4g26960.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G54970.1) Range:  from: 13538749    to: 13539659    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g26965.1    Description:  NADH:ubiquinone oxidoreductase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO38950.1); contains InterPro domain NADH:ubiquinone oxidoreductase 17.2 kD subunit; (InterPro:IPR007763) Range:  from: 13539648    to: 13542403    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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