Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <------ZmHOX2a(1)                                                                   --------->ANAC58                                                                   --------->ANAC58                                                                 <-----------RAV1(2)                                                                 <------NtERF2                                                                --------->LBD16                                                                <------NtERF2                                                               --------->DEAR3(1)                                                               --------->RAP2.3(3)                                                               ----------->RAV1(1)                                                               --------->RAP2.3(2)                                                              --------->RAP2.3(1)                                                              --------->RRTF1(1)                                                              --------->RAP2.6(1)                                                              --------->ATERF1(1)                                                              <------NtERF2                                                              --------->ORA47(2)                                                             <---------RAP2.3(1)                                                             <---------ATERF1(1)                                                            <---------DEAR3(1)                                                            --------->ANAC46                                                           <---------ABI4(2)                                                           --------->ZAT18                                                           <---------ZAT14         ----------->HVH21                                                          <---------ATERF1(1)     <-----------HVH21                                                         <---------DEAR3(1)      --------->At4g35610                                --------->MYB52(1)    ===============================HOX2a_HOX2a                             <---------HSFB2a(2)      =====================HOX2a_HOX2a                             --------->HSFB2a(2)      ------>ZmHOX2a(2)<---------KAN4(2) <---------GLK1(2)                             --------->TOE2(3)    <---------YAB1------>NtERF2    --------->LBD16 ----                          ------>ZmHOX2a(1)     --------->YAB1<---------LBD16    <---------At4g35610     <----------DOF2      ===================================HOX2a_HOX2a       <---------LBD16------- ----CCA1(2)     XXXXXXXXXXXXXXXXXXXXX>MIR472  --------->ICU4------>NtERF2    ------>ZmHOX2a(1)  <---   tctcttcctttcagttttcttccaactccttccataactgaagacgacgatgatgatcgactgcgccgcaggaaatattcctccggtgacacattctcat  13533800                                         <---------ATHB12                                        ------>MYB83                                        ------>MYB46(1)                                       --------->WOX13(1)                                     ----------------->AGL1       <-------GAMYB                                    <-----------------AGL1       <-----------RAV1(1)       <----------DOF2            --------->WRKY12               <---------MYB46(3)   --------->MYB46(3)             --------->WRKY38(1)          ------>MYB46(1)                     -- ----->YAB1         <----------DOF2<---------WRKY18(1)         ------>MYB83                     <---- -->YAB1       ---------->ID1  --------->ATHB12             --------->DEAR3(2)   <------NtERF2  ----- ------ICU4<----------DOF2    --------->MYB46(3)   ----------->HVH21        <---------TOE1(2)   -----   catcaacaactttctttgtcttctttctttgaaccattgaccaatcagggacattgacagggaccgactgttgtctcataggtgccattccttctgtcct  13533900            --------->YAB1                                                                 --------->ATHB12           <---------ATHB12                                                                <---------MYB46(3)           --------->ICU4                                                                 <---------YAB1        <------ZmHOX2a(1)                                                        --------->YAB1     <---------LBD16     <---------ANAC46                                       <---------YAB1   ---- ---->NtERF2<---------ICU4                                                      <---------ATHB12 <--- -----At4g35610       <-------TEIL                                  ----------->GT1      --------->At5g28300 ---->At4g35610   <---------TOE1(2)        <-------GAMYB          <---------TOE1(2)  --------->MYB52(1) ->ZmHOX2a(1) <---------YAB1      ---------->DOF2---------->DOF2<---------SPL7--------->YAB1 <-------   ctgcctctcaggaatcattctaggttcgcttggaagtaaagtttgggttgagaaagaaggtttagtcgtatggttactactaatcataaacggtgattga  13534000                                                  <---------CCA1(2)                                --          <---------HSFB2a(1)      <---------ARR11(3)                                            ----          --------->HSFB2a(1)      <---------ARR14(2)                                    --------->At4g35610 --------->WOX13(1)--------->ANAC46--------->ARR14(2)                                    <---------At4g35610 ----->GLK1(1)   --------->ANAC46  --------->ARR11(3)                                    ----------->RAV1(2) ------GLK1(1)   <---------ALFIN1  <-----------ARR10               ------->TEIL          <---------ZAT2 --WOX13(1)    ----------->RAV1(1) --------->GLK1(2)            <---------REM1(1)--------->YAB1  <---   tatccatcaagaacatcccacacatcatcttcttgaaaatctccatctccccatagctcatgcttcatgtagctcttctccattgatactcacctgcttc  13534100                            ------>ZmHOX2a(2)                           <------ZmHOX2a(2)                          --------->ARR11(3)                          --------->ARR14(2)                          <---------ARR14(3)                          --------->AGP1                          <---------ARR14(2)           <---------STY1(2)                          <---------ARR11(3)           --------->STY1(2)                          --------->ARR14(3)          --------->ANAC58             --------->RAP2.6(3)   --------->AHL20(2) --------->ANAC58                              -    --------->YAB1      ----------->ARR10          <---------At4g35610                              < ------->ANAC46       ---------->DOF2              --------->ZAT2                --------->CCA1(2)  < ----->HSFB2a(2)    --------->ANAC58               <---------ZAT2*TSS           <----------ID1      - ------HSFB2a(2)    --------->ANAC58               --------->At4g35610      ---------->DOF2        <-   tacaaaacataacatgacgaccaagaaagatcttcgattaaacaaaaactctgagctagccagtagtcacaaaatcgcaaaagagacaagaatgtaagag  13534200             --------->HSFB2a(1)             --------->ANAC58             --------->ANAC58             <---------HSFB2a(1)            ------->TEIL            --------------->AtSPL3         --------->ANAC58         --------->ANAC58        --------->SPL7      <---------SPL7                               --------->YAB1      --------->TOE1(2)                            --------->AHL20(2)      --------->TOE2(2)                          --------->AHL20(2)  --------->TOE2(2)      <---------ANAC58       --------->YAB1 -------->GLK1(2)        <---------ANAC58     --------->AHL20(2) -----------ARR10        <---------ANAC46  --------->TOE1(3) ---------ARR14(2)      <---------TOE2(3)------->TEIL                                       --------- -------->ARR14(2)<---------DAG2  --------->AHL20(2)               ---------->DOF2          --------- --------GLK1(2)------->TEIL      <---------AHL20(2)   --------->GLK1(2)     --------->GLK1(2)   agaatctacgtacgaacgtaccttttgacgtttgattaaaatgaagcttaaaataatattctgagattataaagagtggaatctgtgccaagagaagcaa  13534300                                                                               <---------YAB1                                                                          <------MYB83                                                                          <------MYB46(1)                                                                          <---------MYB46(3)       <-                                                                        <---------WOX13(1)       ----                                               --------->ALFIN1      <---------TOE2(2)          -----                                 ----------->HVH21                <---------ANAC55(2)    ============ >ANAC58                     ---------->DOF2 <---------ANAC46  <---------ARR14(2)        <----------DOF2 >ANAC58             ---------->DOF2         --------->ALFIN1  --------->ARR14(2)      ---------->ID1   aatagcttcaaattttgagaagagaaaggaagaaagtgacacaagaggtgtgggattgaagaacgaatacgtagattggttcttattttgtctttataga  13534400            --------->ALFIN1           --------->TOE1(2)          --------->O2          <---------TGA1a          <---------O2                                  <---------YAB1          <---------ANAC58                            --------->YAB1          <---------bZIP60(2)                       --------->ARR11(3)          <---------ANAC46                          <---------ARR11(3)          --------->TGA1a                          --------->YAB1          <---------ANAC58          --------->SPL7<---------YAB1     ===============bZIP_DOF <---------ICU4     --------->YAB1               --------->YAB1     ---------->DOF2        --------->ICU4     <---------YAB1        <---------ANAC58   ------>ZmHOX2a(2)      --------->YAB1     --------->YAB1          <---------ANAC46 --------YAB1             <---------ICU4    --------->AHL20(2)  <-----------RAV1(1) ----->CCA1(2)           <-------TEIL <---------At4g35610<---------ICU4    <-----------HVH21 ---->ARR11(1)   --------->GLK1(2) <---------MYB52(1)<---------YAB1  <---------ANAC58           ----- ===================bZIP_DOF<---------YAB1  <---------AHL20(2)  <---------MYB46(3)           --------   tatgatccaaagacgtgggaatctatattcattattcgttcgctcatttattatgatcatcagtatttgttgcgttctgtcatagtgatgagttttaaag  13534500                                                                                          --------->YAB1                                                                                          <---------ICU4                                                                                       --------->WOX13(1)                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)              --------->ZAT14                                                   --------->ANAC58              <---------ZAT14                                                   ----------->GT1          --------->ZAT6                                                        --------->ANAC58         <---------ZAT14                                                      ---------->DOF2--------         --------->ZAT14                                                   --------->ANAC46  <-------         <---------ZAT18                                                   --------->ANAC58 <--------         <-------TEIL  --------->REM1(1)                                   --------->ANAC55(2)     --------->DAG2   --------->ZAT14                                      <---------ANAC55(2)     <---------------AtSPL8                                                --------->ANAC58 ---------     --------------->AtSPL8---------->DOF2                         <----------DOF2--------->AHL20(2)-    ---------->DOF2   <---------ZAT14                    <---------DAG2    --------->ANAC55(1) <----- ------>GT1 --------->ANAC46      ---------->DOF2        <----------DOF2  <---------LBD16<---------ATHB12 -->DOF2 --------->ZAT18 --------->ANAC46             <-----------GT1 --------->YAB1 --------->ICU4 <   gtcaaaaaaagtacactacattgctacactaaaggctaaagcatatgtagccaattttacttttagtttctttcatcacggaaagtaattaatcatcatg  13534600 --------->AHL20(2) --------->AHL20(1) <---------AHL20(2) <---------AHL20(1) ->YAB1 --ICU4                                                                                    <-------TEIL -YAB1                                  <---------ALFIN1                            <-----------GT1 >ICU4<-----------GT1                 --------->SPL7        --------->ATHB12    <----------DOF2 -------->AHL20(2)                   --------->PCF2    <<<<<<<<<MYB98--------->ETT(2)    <---------GLK1(2) ----YAB1                         <---------------AtSPL8   --------->ICU4       <---------DAG2 ---------AHL20(2)                --------------->AtSPL8<-----------GT1      <-----------GT1   aattaaatttactctgcaagttttatattagaaaaatgggtaccacattcgatatatgttactgattagtgtcgatatatcacttttcacagattcatcc  13534700  Previous    Next  AGI:  At4g26950.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G04630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38947.1); similar to unknown [Picea sitchensis] (GB:ABK21247.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608) Range:  from: 13533570    to: 13534165    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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