Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->DAG2               <-------TEIL                                     --------->AHL20(1)            --------->At4g35610   --------->ZAT14               <---------AHL20(1)  --------->STY1(2)               --------->ZAT18               --------->ARR11(3)  --------->ZAT2                  <---------ZAT14            --------->AHL20(2)  <---------STY1(2)     --------->ANAC46                   --------->AHL20(2)   <-----------HVH21  <---------ZAT2    ----------->RAV1(1)                ----------->GT1    ---------->DOF2    -------- --------->ANAC58 --------->At4g35610              --------->MYB52(1) <---------ZAT6     <---------YAB1 --------->ANAC58 <---------At4g35610         <---------ANAC46 --------->AHL20(2) <-----------GT1   agcaagctaggggaagatgcagcaacacgagaagactgcagtgattttgcgaataactgataaaaatatatagagataaagttgtcacatttcgatagag  13522800                                                                      ------>ZmHOX2a(1)                                                               --------->ZAT2                                                               --------->At4g35610       --------->ATHB12                                                               <------NtERF2            --------->ICU4                                                               <---------ZAT2           <---------YAB1                                                               <---------At4g35610    --------->YAB1                                                    <---------------AGL15        --------->ANAC46                                      ------->GAMYB----------------->AGL1        --------->ANAC58                      --------->AHL20(2)   <------ZmHOX2a(1)  <<<<<<<<<AtERF-3   --------->ANAC58   <              ------>MYB83    <---------ZAT18      ----------------->AGL2        <---------ANAC55(2)<              ------>MYB46(1) --------->ZAT18      <-----------------AGL2    ------->GAMYB   <------- <------ZmHOX2a(2) ----------->GT1  -------->P     <-----------------AGL3 <-----------GT1<---------ICU4 -->DOF2   ----------------->AGL1  --------->MYB52(1)         <<<<<<<<<AtERF-4  <---------ZAT18     <   ccgatcaagttgtaccaaatgagataaaatcgagcactaaccgaaggagaagagccattactggcagctctccttataacagcacgcatcatcattggtt  13522900        <---------MYB52(1) <-----------ARR10 ------->TEIL <---------ARR14(2) <---------ARR11(1)                                   --------->AHL20(2)      <-----------GT1 --------->GLK1(2)                                 --------->ATHB12       <---------RVE1(1) --------->ARR14(2)                                ----------->GT1       <---------ARR11(3) ---------ARR14(1)                                 -------->HAHB4        --------->ARR11(3) ---------GLK1(2)                                 --------->ICU4        <------ZmHOX2a(1)         <-- --MYB46(3)                  --------->ETT(1)     <---------YAB1 --------->DAG2      ------>ZmHOX2a(1) ---------CCA1(2)          <-----------HVH21--------->At4g35610 ---------->DOF2     --------->TOE2(3)   ccgaatctctgttttttttgaagaacacaggtcggaacaattgatcagcaaaatgattaaaaatcaaaaaggaaggattttttcatcctcatctatagtt  13523000                    <---------ARR11(3)           <---------YAB1          <---------AHL20(1)          <---------AHL20(2)                                                         --------->MYB52(1)          --------->AHL20(1)                                                     --------->ANAC46         --------->YAB1                                                  <---------RVE1(1)         <---------AHL20(2)                                  <-----------GT1   <-----------GT1         --------->AHL20(2)     ---------->DOF2       <---------TOE2(2)  <---------CCA1(1)  <---------At4g35610        >>>>>>>>>>MYB80          <---------TOE1(2) --------->ARR11(3)  --------->At4g35610  <----------DOF2            <-------TEIL<-----------GT1<-----------GT1 ---------HVH21     --------->ARR11(3)          <---------GLK1(2)       <---------ARR11(3)   tgtcagctaaattatatttgaagaactttcaaaccaaagaacaaaactcagattcatatgttttttccgattcagatattttctcgctaccgaaaacaaa  13523100                     --------->AHL20(2)                    --------->AHL20(2)             <------ZmHOX2a(2)            <---------ARR11(3)            --------->ARR11(3)        ---------->DOF2                         <---------GLK1(1)          <---------TOE2(3)       --      --------->ANAC58            --------->TOE1(3)             <---------ATHB12               ------      --------->ANAC58  --------->AHL20(2)      --------->GLK1(1)--------->YAB1                <-----  ------->TEIL----------->GT1     --------->TOE2(3)       <------ZmHOX2a(1)<---------TOE1(3)---------   aatgaatcaagaaagatcgaaaataaaaaaatcaaacctcaaggctgtggaaacccagaaggactaatcaaaatgttagggtttggaattggagaatcga  13523200                                                                                  <-----------HVH21                                                                                <-------MYC4                                                                                ------->MYC2                                                                                ------->MYC3                                                                                ------->MYC4                                                                                <-------MYC3                                                                                -------->ABF1          --------->ANAC58                                                      <-------MYC2       <---------WRKY12                                                        <---------O2       <---------WRKY38(1)                                                     --------->ANAC55(2)   ------>ZmHOX2a(2)                                                           <---------ANAC55(2)  <------ZmHOX2a(2)                 <---------LBD16                            --------->TGA1a --------->ARR11(3)                 --------->At4g35610                        --------->O2 <---------ARR14(2)                --------->MYB52(1)                          --------->ANAC46 --------->ARR14(2)              ----------->HVH21                             <---------TGA1a <---------ARR11(3)            --------->ANAC58                            <-----------GT1 --------->ARR10               --------->ANAC58 =========================================bZIP_DOF --->HSFB2a(2)                 --------->ANAC46 ---------->DOF2          <---------WOX13(1)       <-- ----HSFB2a(2)        <----------DOF2 --------->LBD16                 <---------YAB1              --- >GLK1(2) --------->ANAC58  *TSS<-----------HVH21    <-------TEIL   <---------At4g35610    <---------YAB1   gaagatcggtaaacgcatatgagactttggagcaagtcaccggaatatggcaaagttcataagacttgtcttctgatttacacgtgtcaaactataattc  13523300                                                                     --------->HSFB2a(2)                                                                     <---------HSFB2a(2)                                                                    ------>ZmHOX2a(2)                                                                   <------ZmHOX2a(2)                                                                   --------->CCA1(2)                                                                  --------->ARR14(3)                                                                  --------->ARR14(2)                                                                  <---------ARR14(3)                                                                  <---------ARR14(2)                                                                  --------->ARR11(3)                                                                  <---------ARR11(3)          <---------AHL20(1)                                      --------->AGP1          <---------AHL20(2)                                      <---------AGP1          --------->AHL20(2)                            ---------->DOF2      <---------AHL20(2)  <<<<<<<<<EIN3          <---------ICU4  --------->RVE1(1)     <---------AHL20(2)  ----------->GT1<---------------AtSPL8  ----------->ARR10        <----------DOF2 -------MYB52(1)     ------------>CBF   --------------->AtSPL8---------->DOF2           <---------ANAC58 ------->ID1 <---------YAB1         ---------->DOF2    XXXXXXXXXXXXXXXXXXX>MIR156H      <---------ANAC58   gttgttttttattttatttttggcacaatgtataaacagaaagttgtacaattttgacaaaagaaaaagatctggaatttgagttgaattgcttttcaat  13523400                                           <---------SPL7                                         <---------------AtSPL8                   <---------ZAT6        --------------->AtSPL8               <---------ARR14(2)        <---------------AtSPL3               --------->ARR14(2)   <--------ATHB1              <---------MYB52(1)    --------->ATHB51             --------->LBD16        <---------ICU4        <---------YAB1             <-------TEIL            <---------ANAC46        --------->ATHB12   <---------YAB1                --------->SPL7           <---------LBD16         <---------AHL20(2)--------->YAB1                <---------SPL7         --------->ARR14(2)        <---------ATHB51  <---------ICU4              <---------------AtSPL3         <---------ARR14(2)  <---------ANAC46       --------->ICU4               <------NtERF2       <---------MYB46(3)    --------->ALFIN1--------->SPL7                    <---------LBD16   <---   tccatattgtggttccggttactgttaaccggtgtgaataattggtgtacgaccattatgaccattaagtcacaagattagtcggggtacggtctcaatt  13523500                                                                               --------->ATHB51                                                                               <---------ICU4                                                                               -------->ATHB1                                                                               --------->ATHB12         --------->ETT(2)                                                     <---------YAB1         <---------ETT(2)                                                     --------->ICU4        -     ------->TEIL         ---------->DOF2                                   --------->YAB1         <-    <---------ANAC58   --------->CCA1(2)        --------->YAB1             ------------>ATHB5     ---    <---------ANAC58  --------->ARR14(2)       --------->ICU4      <------ZmHOX2a(2)              <--    <---------AtLEC2  <---------ARR14(2)       <---------YAB1     <---------ARR11(3)              --- --------GT1         <------ZmHOX2a(1)  <---------ANAC46          --------->ARR11(3)             <---   cacaatgcatgtcgatatttagaggatataaagcctaacattcggtgttatcatgaaatcgaaatgaagatcagtctaccattattgaaatcgttttaga  13523600          --------->AHL20(2)          --------->YAB1       --------->WOX13(1)                                      --------->YAB1  --------->ANAC46    --------->ANAC58                                           --------->TOE2(3)------->GAMYB    --------->ANAC58                                     --------->ANAC58  <---------ATHB12 ----->ZmHOX2a(2)                                        --------->ANAC58 --------->ANAC58 -----ZmHOX2a(2)                                         --------->ANAC46 --------->ANAC58 ------>ARR11(3)            ----------->GT1         <----------ID1       --------->WOX13(1) -------ARR11(3) --------->AtMYB61             <---------YAB1 ----------->GT1--------->MYB52(1)------ ------>AGP1    --------->MYB46(3)        <---------------AtSPL8        --------->MYB46(3)     <----- ------GLK1(1)<-----------GT1             <---------------AtSPL3  --------->WOX13(1)        <--------   gatcttaagcaattaaaaaccactccgatgttgtaaacttgtagttagtacgataagacaagcaatgttaatcaacaatcaacgaaatatgcaactttta  13523700  Previous    Next  AGI:  At4g26910.1    Description:  2-oxoacid dehydrogenase family protein. similar to 2-oxoacid dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT5G55070.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96550.1); contains InterPro domain Single hybrid motif (InterPro:IPR011053); contains InterPro domain Catalytic domain of components of various dehydrogenase complexes; (InterPro:IPR001078); contains InterPro domain Dihydrolipoamide succinyltransferase; (InterPro:IPR006255); contains InterPro domain 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016); contains InterPro domain Biotin/lipoyl attachment (InterPro:IPR000089) Range:  from: 13519817    to: 13523228    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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