Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->ANAC58                                    --------->ANAC46                                    <---------ALFIN1                              --------->AHL20(2)                             --------->AHL20(1)                             <---------AHL20(1)                       --------->ANAC46             <---------AHL20(2)     <-----------GT1                   --------->ANAC58      <----------DOF2  ----------->GT1--------->ANAC46      ------>ZmHOX2a(2)  <-------TEIL       <-- ------>AHL20(2)       <---------ANAC46             --------->ICU4    --------->ANAC58            --- -------AHL20(2)     <---------ANAC46 --------->ANAC58 <---------WOX13(1)  ----------->GT1        <-- -----DOF2   --------->AHL20(2)   <-----------GT1   <---------YAB1   <---------LBD16         --------   ttaattagctttagtttaatttgttgtgtaatatatatacacccctctcttgtgatgatggatcgattattcacgcatagttacatagaccgtagacgca  13508300                                                                                 <---------ANAC55(2)                                                                                 --------->ANAC58                     <-------GAMYB                                               --------->ANAC55(1)                    <------MYB83                                                 --------->O2                    <---------MYB46(3)                                           --------->ANAC58               --------->ANAC55(1)                                               <---------TGA1a               --------->ANAC58                                                  --------->ANAC46               --------->ANAC46                          --------->TOE2(3)       <---------O2              <---------LBD16                           <---------ANAC55(2)      --------->TGA1a          <---------ZAT18                               --------->ANAC55(2)    <---------ALFIN1        --------->ZAT2                                 <-------TEIL         --------->REM1(1)        <---------ZAT2                              --------->At4g35610   ------>NtERF2        <---------At4g35610                        --------->ANAC58       ----------->RAV1(1)        --------->At4g35610             <---------ANAC46--------->ANAC58 ----------->HVH21      <---------ALFIN1          <<<<<<<<<<<<<<<<<LFY<---------At4g35610 ------>NtERF2 ---------ARR10--------->ANAC58<---------ZAT18     --------->ANAC58    <---------ATERF1(1) ------>ARR14(2)    ----------->GT1     <---------ANAC58<---------ANAC46<------NtERF2 -------ARR14(2)    <------MYB46(1)     <---------ANAC58--------->ANAC58--------->LBD16 ->ANAC46 ----------->HVH21    <---------ETT(2)--------->YAB1          --------->RAP2.6(2) --------->ARR11(3)   gaactcgcccagctcacacggatggttacactgtccacaatggcgtttatcgtaagctacgtaaacacattggccgcgacaacacgtctgtgagaacttg  13508400                <---------ALFIN1                ----------->RAV1(1)                --------->DEAR3(1)      --------->TGA1a               <------NtERF2            --------->ANAC58              ------>NtERF2             --------->ANAC58                                            <             --------->ANAC58           <---------O2                                            <----             --------->ANAC58           <---------TGA1a                                         <----             --------->ANAC46           --------->O2                                            -----            ------->MYC2                <---------ANAC55(2)                                    <-----            <-------MYC2           --------->ZAT14                                             ------            ------->MYC3           ----------->HVH21   <-----------RAV1(1)                 <---------ALFIN1            <-------MYC3     <-----------TGA1         <---------YAB1                    <---------ALFIN1           --------->ANAC58  <-----------HVH21     --------->ICU4                     ------>ZmHOX2a(1)           --------->ANAC58 --------->bZIP60(1)  ------->TEIL                    <---------ANAC58   <           --------->ANAC46 <---------bZIP60(1)<---------ZAT18                   <---------ANAC58  <-   catttgttcttacacgcgccacagttattgtcgtcactggacacgtctatgcacttattgttgcagcatgtcatcgtcgagttgcttcctccccctccgt  13508500        --------->ARR11(3)        <-----------ARR10        <---------ARR11(3)       <---------CCA1(2)                                                                            <    <-------TEIL                                                                         <----------DOF2 ----------->GT1                            <---------TOE2(3)                          ---------->ID1 ---------------AtSPL3                      <---------TOE1(3)                          ------>NtERF2< -----STY1(1)                      <---------At4g35610                               <---------RAP2.6(2) -----MYB52(1)                     --------->At4g35610                              --------->SPL7 <- ---->STY1(1)                      <---------ZAT14                                 <---------ARR14(2) ----SPL7            ------>ZmHOX2a(1)   <---------MYB52(1)                   --------->MYB52(1)  <-- --->LBD16  <---------LBD16        --------->ZAT14    --------->ANAC58      <---------ATHB12     <--- ---------------AtSPL8             <---------ZAT2     --------->ANAC58      --------->MYB46(3)   <--- --------ANAC46      <-----------RAV1(1)<----------DOF2          <----------DOF2   --------->ARR14(2)   agggggtacatatctcagggttcctgttgcaatggtctgcagcgttagggtttcgctcgcctacttccttttgagccaataaccggttcggccttatagt  13508600                                                                                         <---------YAB1                                                                                        <-------GAMYB                                                                                       <---------MYB46(3)                                                                                      <---------MYB55(1)                                                                                      <--------P          <-------TEIL                                  <---------TOE1(3)            <-------GAMYB      <---------DEAR3(1)                                <---------TOE2(3)           <---------MYB46(3) <---------ZAT18                                    <-------GAMYB                  <---------ANAC58 <---------SPL7                                    <---------MYB46(3)              <---------TOE2(3) --------->ZAT14        <---------ZAT14            <------MYB46(1)                 <---------ANAC58 ---------ANAC58        <---------ZAT18            <------MYB83                    <---------ANAC46 ---------ANAC58        --------->ZAT18        <-----------RAV1(1)                 <---------RAP2.6(2) -----NtERF2            --------->ZAT14 <-------GAMYB   <---------AtMYB61         <---------LBD16 -------ORA47(2)   <---------ANAC58    --------->MYB55(2)                     --------->ATHB12 ------DEAR3(1)---------->DOF2         <---------MYB46(3)        <---------YAB1 <---------WOX13(1) ------RAP2.3(3)   <---------ANAC58   <---------AtMYB61 <---------YAB1       <---------YAB1   cggcgtactcggtgcatcaaagcttgtgtactctctaatggtggttgtattgttggttatggttgtgatgactgcgattgtgattgcggttgttattgca  13508700                                                 --------->HSFB2a(2)                    --------->ANAC58       <---------TOE1(3)                        ---------->ID1                    --------->ANAC58       <---------TOE2(3)                  <----------DOF2                --------->ANAC46       <----------DOF2          <------------CBF   <-----------GT1<--          --------->At4g35610 <----------DOF2    <---------HSFB2a(2)    <<<<<<<<<TBF1   <----------DOF2   atggacacgagtagcttcacgaaggccattttctttttgagctttagggttcgagagagagagagagattgttcttcttcctttttttctctttagaaat  13508800                                                                                        --------->GLK1(1)                                                                                        <---------GLK1(1)                                                                                       <---------ARR14(2)                                            <---------ZAT18                            --------->ARR14(2)                             <------ZmHOX2a(1)                                        <------ZmHOX2a(1)                       <------MYB46(1)      --------->ZAT18                          --------->ANAC58                     <---------WOX13(1)    --------->ALFIN1                          --------->ANAC58                    <------------CBF --------->ALFIN1                              <-----------RAV1(2)              <------------CBF    --------->MYB111(2)                            --------->ANAC46             <------ZmHOX2a(1)    --------->MYB111(1)     <---------YAB1      --------->WRKY12      --------->CCA1(2)<------MYB83<------MYB83 --------------------->WRI1    ----------->HVH21     - ---------->DOF2   --------->ATHB12<------MYB46(1)    <-----------TBP      <---------ZAT6      ------ -------ANAC55(2) <---------YAB1  --------->MYB46(2)<---------ZAT6 ------>ZmHOX2a(1)<---------TOE2(2)   acttaaagatagaaaggattgtgattggtgaggaagtaggtgagggtggacttagtgtttatagttgtcctcgagtagagttgacgcaggaaatgcgatg  13508900                                        --------->AHL20(2)                                        --------->ATHB51                              <----------DOF2                             <---------ANAC58              --------->ARR11(3)        <---------ICU4              <---------ARR11(3)    <---------AHL20(2)              <-----------GT1<---------ANAC58     --------->ATHB12   <---------MYB52(1)          <---------YAB1  ----------->GT1     <---------ANAC58  <---------AHL20(2)     <---------ANAC58                    -- --------->DAG2       <---------ANAC58 --------->ICU4--------->YAB1 <---------YAB1            ------- --------->DOF2  <----------DOF2    --------->AHL20(2)         <---------ANAC58           ----------- ----->GT1 <---------GLK1(2)---------->ID1        <---------------AGL15                ---------->DOF2   aaaaaagtgattagattatcttttccgtttggctttttttaattatttctgactataataagttttcttgacgatagaaatttgaagtagaaaggaaaca  13509000                                                                                                    -                                                    <----------DOF2                                --                                                --------->ANAC58                                   --                                          <-------TEIL                                            ---                                          --------->ZAT18                                        ----                                       <---------ANAC58            <-------TEIL                 -----                     <-------TEIL      <---------ANAC55(1)   ---------->DOF2                  <------ <------ZmHOX2a(1)   ------->TEIL      <---------ANAC58 <---------------AGL15           --------->ANAC46 ------->YAB1    <---------------AtSPL8<---------ANAC46 --------------->AGL15     --------->YAB1----- ----->CBF       ------->TEIL ----------->TBP   --------->ANAC58  --------->CCA1(2)     --------->ANAC58 >GT1           <---------AtLEC2  <-----------RAV1(1)  --------->YAB1  <-------TEIL     --------->ANAC58   ataggaatagagctatatgcatgtacgttgctatatatgttgcgtgcattacgcctttcaaaataaagatacatacactaacaaatataaacgcaaacga  13509100      --------->CCA1(2) -------->LBD16                                                                                 <---- ------->ANAC58                                                                             <------NtERF2 ------->ANAC58                                                                           <---------DEAR3(1) ------>MYB46(3)                                                                          <---------ANAC46 --->TEIL                                                                            ---------->DOF2 ---->MYB52(1)                                     ----------->RAV1(2)            --------->ANAC58 ---MYB52(2)                  ------->TEIL     --------->SPL7                   ---------->DOF2<----- ---->ARR14(2)         <---------YAB1    <---------ALFIN1      <-----------RAV1(2)--------->ANAC58   accgcaagagatgatttacatagacatgaatgaatccatagccccatgggacgacctgaggcaattcaggcgagttgaacggagaagcaaaggcgtcgat  13509200  Previous    Next  AGI:  At4g26880.1    Description:  stigma-specific Stig1 family protein. similar to stigma-specific Stig1 family protein [Arabidopsis thaliana] (TAIR:AT5G55110.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66281.1); contains InterPro domain Stigma-specific protein Stig1 (InterPro:IPR006969) Range:  from: 13508271    to: 13508729    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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