Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      >>>>>>>>>WRKY18                                                 --------->TOE2(3)                                 <-                                         >>>>>>>>>MYB98                                      <-------          --------->YAB1                ------>MYB46(1)  <---------YAB1                    <-------TEIL         <---------YAB1                 ------>MYB83<---------WRKY18(1)                <---------TOE2(2)   ------->TEIL             <---------YAB1       --------->TOE1(3)                     <---------TOE1(2) ---------YAB1         ----------->GT1<---------MYB59  <----------DOF2             <---------ARR11(3) ----->TOE2(2)        <---------TOE2(3) --------->MYB52(1)                         --------->ARR11(3)   atatgaatgttttcatagttgattttggttataacagaaacctaacaaaaaccttgacttttattgtttcttaaacaagagtcaagacctaggttcttta  13496900                                <---------ICU4                   --------->TOE2(3)                                                      -----------          --------->LBD16      <---------YAB1                                        <---------ICU4         <---------ANAC58    <---------ICU4                       <---------DAG2     --------->YAB1         <---------ANAC46    --------->YAB1                       <----------DOF2    <--------HAHB4    <---------AtLEC2<---------MYB52(1)                  --------->ALFIN1            --------->ICU4 ----------RAV1(1)----------->GT1     <----------DOF2 --------->ALFIN1              <---------ATHB12 ---DOF2 <---------ANAC58 --------->YAB1  <----------DOF2 ----------->HVH21------>ZmHOX2a(1)   tatgttgcattgcgcatatttcgttaattcatcatcatttctttcttttgtgaagagtgtgtgacagactttatctccttcaactaatcattttgttaat  13497000                                   --------->AHL20(2)                                   <---------AHL20(2)                                               <                                  <---------AHL20(2)                                                =           --------->ATHB12    --------->AHL20(2)                                               <----          <---------YAB1       <---------AHL20(2)                                            <-------          --------->ICU4      --------->AHL20(2)                                           <---------MYB46(3)        --------->bZIP60(1)   <---------AHL20(2)                                --------->ICU4<------        <---------bZIP60(1)   <---------AHL20(1)                    --------->MYB46(3)    <---------AtMYB61 ---------->DOF2              --------->AHL20(1)                  ----------->RAV1(1)     --------->ALFIN1 >GT1----------->HVH21  <-----------GT1                <-----------HVH21        <---------ATHB12-----   acacaaagtgacatgatttatagatttaacaatttatttatttcttctatgtcaaattgtcaagtcttcaacagatgatgaaatcatggagagtggtgga  13497100               ------->MYC3               <-------MYC3              <---------ANAC46              <---------ANAC55(2)              --------->ANAC55(2)              <---------O2              <---------ANAC58              <---------ANAC58              --------->TGA1a              <---------TGA1a           ----------->HVH21          <-----------TGA1          <-----------HVH21         --------->bZIP60(2)         <---------bZIP60(1)         <---------TGA1a         --------->bZIP60(1)         --------->O2         --------->TGA1a         --------->ANAC58         <---------O2         --------->ANAC58 --------->ARR14(2)         <---------ANAC55(2)         --------->ANAC55(2)         --------->ANAC55(1)       --------->TOE2(3)                         --------->ALFIN1   <------ZmHOX2a(1) <------ZmHOX2a(2)   --------->AHL20(2)                <---------REM1(1)   =========================HOX2a_HOX2a --------->AHL20(1)                 <-----------RAV1(1) ------ZmHOX2a(1)   --------->ARR11(3)  <---------AHL20(1)              --------->MYB52(2) ===========================HOX2a_HOX2a <---------AHL20(2)              ----------->ARR10--------->AHL20(2) -----ARR14(2)<---------bZIP60(1)  <---------MYB59 ------>MYB83      <---------ANAC46  --------->AHL20(2) --ANAC46--------->ANAC46<------ZmHOX2a(1)         ------>MYB46(1)   <-------GAMYB    --------->YAB1 ---MYB46(3)------------->DYT1     --------->TOE1(3)                <------MYB83      --------->AHL20(2) ---->ARR14(2)--------->O2<---------ARR14(2)  <-----------GT1       <------MYB46(1)  <---------ATHB12   taggaggactcacgtcacgtgagatcaggaactgcaacctaaaatatttaaccaaatgaaattgtctagtgggttagatgtggcccaataaaaatataag  13497200                  --------->ARR14(2)             ----------->RAV1(1)            --------->ANAC58                                                  <---------MYB46(3)            --------->ANAC58                                                <---------MYB52(1)          --------->MYB52(1)                    ---------->DOF2   <---------ARR14(2)     <-----------GT1             --------->At4g35610   --------->GLK1(2)------->TEIL                -  <---------ICU4  <---------ARR14(2)    <---------MYB52(1)        --------->GLK1(2)                <-  --------->YAB1  <---------GLK1(2)   <---------MYB46(3)          --------->ARR14(2)     <---------SPL7   cccattataacgaaacgacagatttgaacataactagcagccgttggattaaaagagaacctagagagaatatgaaccgttggatagatgccctacgatt  13497300                   <---------ANAC58                   <---------ANAC46                   <---------ANAC58           --------->ARR14(2)           <---------ARR14(2)         --------->ANAC58           --------->GLK1(2)     --------->ANAC46    --------->ARR11(3)          <---------GLK1(1)      --------->ANAC58    <---------ARR11(3)                          <---          --------->GLK1(1)      --------->ANAC58    <---------GLK1(2)           <---------CCA1(2) <-         <------ZmHOX2a(1)      *TSS  --------->ANAC58                           <---------At4g35610- -------->YAB1    <-------TEIL ---------->DOF2      <---------RVE1(1)         <-------TEIL <---------YAB1 --------YAB1<---------------------WRI1    --------->WOX13(1)        <----------DOF2    --------->At4g35610   tatgatagagaggaatccgatgcgtccaagtacaaaagccacggccaattagagagattttcagagtcagtctttttatattcatctctcagcatcattc  13497400          ------->TEIL                                     <---------HSFB2a(1)     <---------ANAC58                            <---------SPL7                         <----------ID1     <---------ANAC58                            ----------->HVH21                    <------ZmHOX2a(1)     <---------ANAC46                        <-----------GT1 <----------DOF2       <------ZmHOX2a(1) >>>>>>>>>ARR2                    <---------ANAC58         --------->HSFB2a(1)  <-----------RAV1(2) -------DOF2                      <---------ANAC58 --------->SPL7         <---------At4g35610      <- --------YAB1                     <---------ANAC55(1)     --------->GLK1(2)     <---------LBD16 ----- -------->ATHB12                  <---------ANAC46--------->MYB52(1)      --------->At4g35610   -----   tttgattgtgtgaatctctcatcgttctctcaaatttcgtgtttttgtaaccggacggagaacctttcacgatgtctgcaaaccaggaggaagacaagaa  13497500             <XXXXXXXXXXXXXXXXXXXXMIR159C             --------->At4g35610           <------ZmHOX2a(1)         ----------->HVH21         --------->ALFIN1        <---------WRKY12   ----------->HVH21             <<<<<<<<<WRKY18                       <---------ANAC58  <------ZmHOX2a(1)      --------->TOE2(3)                             <---------ANAC46 ----------RAV1(2)    --------->WOX13(1)<-----------RAV1(2)      <---------YAB1       --------->ATHB12 ---->ANAC58 --------->ZAT2 ---------->DOF2                ------>ZmHOX2a(1)     <---------YAB1  <--- ---->ANAC58 <---------At4g35610--------->WRKY18(1) <----------DOF2    <---------ANAC58      <-------   gccaggagacggaggagctcacatcaatctcaaagtcaagggacaggtatctctctttctccttctcatccttgtgtgttcttgtgaatgtttgggtttc  13497600         --------->At4g35610         <---------At4g35610         <---------ZAT2         --------->ZAT2     <---------REM1(1)                                    <---------ANAC46   <---------ANAC46                                       <---------ANAC58   <---------ANAC58                                 <---------TOE1(3)   <---------ANAC58<---------TOE2(3)        <---------AHL20(2)   <---------ANAC55(1)   <-----------GT1<------MYB46(1)   <---------ANAC58 --------->TOE2(3) ------YAB1        <---------TOE1(3)    <------MYB83<---------TOE2(3)      --------->YAB1     <------ --GLK1(1)--------->TOE1(2)             ----------->GT1  --------------->AtSPL3             ------>ZmHOX2a(1)   tgatttcgtgtagctgcgattagggtttttcattctccaatttggtttaattttagggtttcgtactactagctcagtcttaatggtcttcttcctcttt  13497700                       <----------DOF2                       <---------DAG2                <---------ARR14(2)       <---------ANAC58                --------->ARR14(2)  ------->MYC3                --------->ARR11(3)  <-------MYC3                                              <------            <---------TOE2(3)   <---------REM1(2)                                            <-------  <-----------GT1   ------>ZmHOX2a(1)    <---------ANAC58                    --------->AHL20(2) ----DOF2  ---------->DOF2 <---------YAB1<---------ANAC46                    <---------AHL20(2) <----   tgttttacaggtttaaagtatcctgctttatgtttacacgtttgcttgtttttgctaattgtttatcaaatttctgaaattatataagtcttgtttaggt  13497800  Previous    Next  AGI:  At4g26840.1    Description:  SUM1 (SMALL UBIQUITIN-LIKE MODIFIER 1). Identical to Ubiquitin-like protein SMT3 (SMT3) [Arabidopsis Thaliana] (GB:P55852;GB:Q9SZ24); similar to SUM2 (SMALL UBIQUITIN-LIKE MODIFIER 2) [Arabidopsis thaliana] (TAIR:AT5G55160.1); similar to Os01g0918300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045207.1); similar to unknown [Picea sitchensis] (GB:ABK22096.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) Range:  from: 13497332    to: 13498736    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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