Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->TGA2(2)                                                     <-----------TGA1                                                    <---------TGA2(1)                                                    --------->O2                                                    <---------O2                     <---------ANAC58               --------->TGA2(1)               <---------YAB1                       <---------bZIP60(1)              <---------AHL20(2)                    --------->ANAC46              --------->AHL20(2)                   ----------->STF1             <---------AHL20(2)                    <-----------STF1             --------->AHL20(2)                  ----------->HVH21                <---------TOE2(3)         <---------AHL20(2)        <---------TOE2(3)--------->bZIP60(1)         <---------AHL20(2)     <---------ANAC46<---------ANAC58    <---------ANAC46             --------->GLK1(2) --------YAB1--------->YAB1  <---------YAB1 ----------->ARR10         --------->ARR14(2) ---TEIL --------->AHL20(2) --------->AHL20(2)<---------ARR14(2)      <---------ARR14(2)   cattcttgtgtttaattaaaattgctggattaatatagaggttgtgtagatttgacgtcatttggatgggagaatttggaaattaatgttcaactactta  13487100                                                                                               <-----                                                                                               ------                                                                                           <---------AHL20(1)                                                                                           <---------AHL20(2)                                                                                           --------->AHL20(2)            --------->MYB52(1)                                                  <---------ALFIN1           ------->GAMYB                                    --------->ANAC58   --------->MYB46(3)          <---------MYB52(2)                                --------->ANAC58  ------->TEIL --------->AHL20(1)          --------->MYB46(3)                                --------->ANAC46 <-----------GT1  -------          <---------MYB55(2)                   ----------->GT1     --------->TOE2(2)      <---------ATHB12  <---------YAB1                <---------WOX13(1)<---------AHL20(2) <---------TOE2(2)    --------->AHL20(2)   atctataattcaacaaacgataaatgaccacttaattgctaatagcctctagttaattcaaaacgcaaacctatgttatgaaccacttgtcaataaattt  13487200                                                                                   <---------ANAC55(2)                                                                                   <---------ANAC46                                                                                   <---------ANAC55(1)                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                                   --------->ANAC55(2)       --------->MYB52(2)                                                         --------->MYB52(2)    <----------DOF2                                                             <---------MYB52(1) --------->ARR11(3)                                                            <---------RAP2.6(3) <---------ARR11(3)              <---------DAG2                                <-------GAMYB ----AHL20(2)                    <----------DOF2     ----------->HVH21   <---------ANAC58      <----- --->AHL20(2)                 <-----------GT1<-----------HVH21           <---------ANAC58     <------ -->AHL20(2)             ---------->DOF2  --------->GLK1(1)           <----------DOF2  <---------YAB1   ataaatctttagttgagactcaaaaaacaaagttactttatcggaaatgtcacatttgacgcatgagagacactttcttgccgttacttgttattgtcgt  13487300               <---------MYB46(3)      --------->AtMYB61                      <---------ALFIN1      ------->GAMYB                        ----------->RAV1(1)     --------->MYB46(3)                   ----------->HVH21    --------->ANAC58                    --------->ALFIN1    --------->ANAC58                   --------->TOE1(2)   ------->GAMYB                       --------->TOE2(2) ---------->DOF2  <---------MYB111(2)                  <-------MYC3   --------->ANAC46  --------->MYB46(3)                   ------->MYC2<---------ZAT14  <---------MYB55(2)                   <-------MYC2<---------ZAT18  <---------MYB52(2)                   ------->MYC3--------->ZAT14   --------->GLK1(2)  <---------MYB111(1)     ---------->DOF2--------->SPL7--------->MYB46(3)                           - --GAMYB      <---------TOE2(3)       <---------ANAC58--------->ANAC58  <----------DOF2            -- ---MYB46(3)  <---------YAB1          <---------ANAC58--------->ANAC58 <---------ICU4              --   tgcaacaaccaaaactatggttgaactaaaaagccccaaaacgtgcgacacagttcacccaaagtgcaaataatctttacattcaagactctagactcag  13487400                                                             ---------->DOF2                                                         --------->At5g28300         <---------At4g35610                                                        --------->LBD16              ----------->RAV1(2)                                                        ----------->GT1           <-------TEIL     --------->YAB1                                   <---------LBD16        <---------ANAC55(2)     --------->AHL20(2)                             <---------ARR14(2)  <---------ANAC58           <-    ----------->TBP                                 --------->ARR14(2)  ----------->GT1     <-------- ----------->CBF                                    --------->GLK1(2)   <---------ANAC58    <-------- ------->ANAC58                                <---------ANAC58        <-------TEIL  --------->At4g35610 ------->ANAC58     --------->CCA1(2)          <---------ANAC58*TSS <---------HSFB2a(1)----------->HVH21   taagcaataaaaacagtaagtgatacaagaacagagagttgagttttgagcgtgaatccggtaaaaaggaagatgcgttacatatacatctgaagcttgc  13487500                                                                                   --------->ATHB12                       --------->ARR11(3)                                          --------->ATHB51       --------->ARR14(2)                                                --------->ZAT18       --------->GLK1(2)                                                 <---------ZAT18       ------->TEIL    <---------ARR11(3)                             --------->ZAT2       <---------ARR14(2) --------->GLK1(2)                           <---------ZAT2    --------->ANAC58   <---------AHL20(1)                             --------->At4g35610          <-    --------->ANAC58--------->AHL20(2)                                <---------At4g35610          <- --------------AtSPL8  --------->AHL20(1)                            <-----------RAV1(1)           -- -ANAC58          <---------AHL20(2)     <----------DOF2     --------->ANAC46      -------->ATHB1 <-- -ANAC58   ------>ZmHOX2a(1)     <----------DOF2            --------->RAP2.6(3)   <---------YAB1-----   aatggtacgaatccttctattttaaaatattctgtctttctctcttttttagtagctataaatacggctctctgctgcacaactattattgaaactctca  13487600                                                                                    --------->YAB1       --------->At4g35610        <-----------RAV1(1)                             --------->ANAC58       <---------ZAT2        --------->ZAT6                                       --------->ANAC58       <---------At4g35610------->GAMYB                                          --------->YAB1    -- -------HAHB4            <---------MYB46(2)                                  --------->AHL20(2)    -- --------ICU4            <---------MYB52(2)                                  <---------AHL20(2)    -- ------->YAB1            <------------MYB.PH3(2)                            --------->AHL20(2)    --- -------ATHB12      --------->TOE2(3)         --------->AHL20(2)      <------ZmHOX2a(1)       ------- ---->WOX13(1)     --------->At4g35610      --------->YAB1          <---------TOE2(3)    --------->At4g35610   atcattttcagctcattactcacctcaactaactctctgtggccaaaaataaacagagacatatcagactaaggagtatttaataagcatcatctaacaa  13487700                                                           ------>MYB46(1)                                                           ------>MYB83                                                        <---------ANAC55(2)      <---------ARR11(3)                                --------->ANAC55(2) ------->ANAC58                                      <---------ARR11(3) ------->ANAC58                                      --------->ARR11(3) ------->ANAC46                                      <---------ARR14(2)                  <---------ATHB12 ---->GAMYB<-----------GT1            <-----------RAV1(2)<---------MYB59       <---------ANAC58 -->MYB46(3)         --------->At4g35610             --------->ARR14(2)        <---------ANAC58   caggccaaggtattaactacacgagctaaatctgttttagtcaggtttgatagaagatacctatctttctccatcttaaatgcttgctccaattgttctt  13487800                <---------ANAC58                <---------ANAC58               <-------TEIL                                                        <---------ANAC58              --------->GLK1(2)                                                    <---------ANAC46 <              --------->ARR14(2)       ----------->GT1                             <---------ANAC58 -              <---------ARR14(2)   <---------AHL20(2)                          <---------ANAC58     <              --------->ARR11(3)   --------->AHL20(2)                          <---------ANAC58     -       --------->YAB1        --------->ANAC58                     --------->At4g35610         <------   <---------AHL20(2)        --------->ANAC58           ---------->DOF2      --------->ARR11(3)  <---   --------->AHL20(2)    <---------HSFB2a(2)       <---------ANAC46         --------->GLK1(1) <------  <---------ATHB12       --------->HSFB2a(2)       ----------->GT1<---------At4g35610    <-----------RAV1(1)   cccaattaatcgtgaggttcttgttttgcagaagcaaaaaattgaaaaaacttgtgtaaaaagcatgcagcgaaacagagttcttgcgttcttgttgcta  13487900                              --------->ALFIN1                             <-------MYC3                             ------->MYC3                            <---------TGA1a                            --------->TGA1a                            <---------ANAC58                                                    <----                            <---------ANAC55(1)                                            -------->P                            --------->O2                                                  ------->GAMYB                            <---------ANAC58                                             --------->MYB46(3)     <---------ZAT2    ----------->HVH21                --------->ARR14(2)               <---------MYB111(2)     <---------At4g35610    <---------ANAC46         --------->YAB1                      <---------MYB55(2)     --------->At4g35610    <---------O2      <---------ALFIN1                        --------->MYB46(3) ---------ZAT2        --------->TOE1(3)      --------->LBD16                          --------->REM1(1) -------->At4g35610  ----------->RAV1(2)    --------->LBD16                         ----------->RAV1(1) ---------At4g35610<---------GLK1(1)        --------->ANAC58                     --------->ANAC58 -------->ZAT2    <---------ARR14(2)        --------->ANAC46                     --------->ANAC46 ---ANAC58        --------->ARR14(2)        --------->ANAC58<------MYB83         --------->ANAC58---- ------At4g35610  <---------ARR11(3)       <---------LBD16  <------MYB46(1)    =================RAV ---ANAC58        --------->ARR11(3)     <-----------GT1<---------ARR14(2)     <-----------RAV1(2)   gcagctcagctcttggtgaagatacctgaaacgtgtgcaaaatttcccgcacttatcgtatttggtgactcaactgttgattcaggcaacaacaaccaga  13488000  Previous    Next  AGI:  At4g26795.1    Description:  other RNA Range:  from: 13487398    to: 13489571    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g26790.1    Description:  GDSL-motif lipase/hydrolase family protein. similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT2G42990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38902.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087) Range:  from: 13487463    to: 13489377    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version