Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <-------TEIL                                                   <---------GLK1(2)                                                   <---------ARR14(2)                                            <---------ALFIN1                                            --------->AtMYB61                                           --------->ANAC46                                         --------->REM1(1)                                         --------->ANAC46                                         --------->ZAT6                                             -                                    --------->At4g35610                             <---------HSFB2a(2)                                    <---------At4g35610                             --------->HSFB2a(2)                           --------->ARR14(2)<---------ZAT14                   ------->TEIL        <-             <----------DOF2     --------->LBD16   --------->ARR14(2)         <---------CCA1(2)    --    ---------->DOF2        <---------ARR14(2)--------->ZAT14                  <---------GLK1(2)  ----   aaaccaaaaaacaccctttcattcagacaaatctccagagcttacaccacacagattcagacaaaacacaaacccatcttgaatctctcgaaatcaagtc  13435400           <-------TEIL    --------->TOE2(3)                                       --------->AHL20(2)   --------->ANAC46                                        --------->AHL20(2) -------->YAB1--------->AtLEC2                     ---------->DOF2        <---------------------WRI1 --------ATHB12                             --------->ARR11(3)     --------->YAB1            -------- ------->MYB46(3)          --------->MYB46(3)--------->GLK1(1)  --------->YAB1            ---------->DOF2 ----->WOX13(1)  ------->TEIL               <---------ARR11(3) <---------AHL20(2)        --------->AHL20(2)   aatcaacgtcaaattcatgcattttgtcaacaacttaatagcatcagatatcaaaaagacaataaataatcaaaacatcgaaattcacaaataaaagaag  13435500                      --------->ANAC46   ---------->DOF2          <---------ARR14(2)         --------->TOE1(3)  --------->TOE2(3)               --------->TOE2(2)                 -------      --------->GLK1(1)     <----------DOF2                 --------->TOE1(2)               --------- -->DOF2 --------->TOE2(3)  --------->TOE1(3)        ---------->DOF2      ---------->DOF2---------->DOF2   cgcatgagaaaccctaacttctcatcgcaactttaaacaaacacaaagaagaaccaaaagaacatgcgaattcaaacaaagctcaaaacataaaagctca  13435600               <---------ARR14(2)                    --------->TGA1a        <---------At4g35610                    <-----------ARR10   --------->CCA1(2)                          --------->ARR14(2)           <------NtERF2  --------->ARR11(3)         ---------->DOF2  <---------GLK1(2)          --------->ANAC46  <---------ARR11(3)         ==================================bZIP_DOF  --------->ANAC58           < -->ZAT18      --------->ARR14(2)  --------->At4g35610                   --------->ANAC58      ------ >At4g35610    <XXXXXXXXXXXXXXXXXXXXMIR781<---------LBD16       --------->YAB1           <-----------GT1   caaagatttaagcagagtatccacagggttctaaagcagaagacttcggaatctcacctcagagtatcacaagactcggcactgagttttttttctcctc  13435700                                                                                             --------                                                                                             --------                                                                                           ==========                                                                                           ----------                                                                                        --------->ANAC58                                                                                        --------->RAP2.6(2)                                                      <---------ANAC58                  --------->ANAC58                                                      <---------ANAC46           --------->ARR11(1)                                                      <---------ANAC58           <---------GLK1(2)    <----------DOF2                         <----------DOF2                   <---------TOE2(3)    --    <---------DAG2                        ---------->ID1                    *TSS <---------ARR14(2)<- ---------MYB111(1)              <----------DOF2<---------YAB1     ----------->GT1     --------->SPL7 >ZmHOX2a(1)      --------->MYB52(1)     <-----------GT1        <------ZmHOX2a(1)--------->ARR14(2)<-   taactactttttttcttacaaaacagaacaaatagcttttgtttttctttttgatagcgttttttaggagagagaaattcaaggattcggacgcaaagcc  13435800                         <-----------RAV1(2)                       <-----------HVH21                       <-----------TGA1                      --------->bZIP60(2)                      --------->ANAC58                      --------->TGA1a                      --------->O2                      <---------O2                      <---------TGA1a           <---------SPL7              <---------AHL20(2)              --------------->AtSPL3             --------->AHL20(2)              <---------At5g28300             <---------AHL20(1)             <-----------GT1   <---------AHL20(2) --------->ANAC46   --------->ATHB12   --------->AHL20(2) --------->ANAC58   <---------ICU4 ->ANAC58    <---------AHL20(2)   <------ZmHOX2a(1) ->ANAC58    --------->AHL20(1) <---------TOE2(3) --------->SPL7 ===============================bZIP_DOF<---------ATHB12                                       <----- >DOF2  ------------>CBF--------->TGA2(2)-------->ATHB1                                     <-------- ------->ARR14(2)     <---------bZIP60(1)<--------HAHB4                <---------ZAT6<-------TEIL --------ARR11(3)     --------->bZIP60(1)--------->YAB1   <------------CBF     --------->MYB52(1) --------GLK1(2)      <<<<<<<<<<AtbZIP1------->TEIL      --------->ATHB12 <-------TEIL   <---------GLK1(2)   agattttaaatacaatttaatgccacgtcaggcttaggatgaatcattaccgtccgatttcattgctgtaatagagttcatcaacggttcagattttatg  13435900                                                 ----------------->AGL1                                                 <-----------------AGL1                      --------->ANAC58         <---------ARR14(2)                      --------->ANAC58   <---------SPL7                                           <--                   ----------->TGA1--------->TOE2(3)                                              <--                ------>ZmHOX2a(2)  --------->TOE1(3)   <-----------RAV1(2)                       <---     ------->TEIL  ----------->HVH21  --------->MYB52(1)                                         ---- ----YAB1<---------ANAC46    <-----------GT1   --------->ARR14(2)                   <---------TOE2(3) -AHL20(2)    <---------ARR14(2) -------->P<---------LBD16               <----------DOF2  <---------AHL20(2)   tttgatgcatctcgtggatcgatgacgctataaactaccctaacgtccggttccgaaccaggtaccgagcctagactttatatttcaaggattttatatt  13436000                                                         --------->AHL20(2)         --------->ICU4                                                         <---------AHL20(2)    ----------->GT1                                                    --------->AHL20(2)         <------MYB83                                                    <---------AHL20(1)         <------MYB46(1)                                                    <---------AHL20(2)      XXXXXXXXXXXXXXXXXXXX>MIR870                                                    --------->AHL20(1)   <---------AHL20(2)                                                    --------->ARR11(3)  --------->AHL20(1)                                                    <---------ARR11(3)  <---------AHL20(1)        --- ----MYB46(1)                                      --------->AHL20(2)   <---------AHL20(2)       <--- ----MYB83     ----------->GT1              ----------->GT1   <-----------GT1 --------->MYB59  ------ ------TOE2(3)--------->DAG2           <---------ANAC46<---------AHL20(2)--------->AHL20(2)  -------- ----->MYB59 ---------->DOF2        ----------->HVH21<---------AHL20(2) --------->AHL20(2)  <--------   aggtttttggacaaaaaaagttaacatattcaatgtttgtgacctatagaaaaatatatttttttaactacaaatttaatttggtaatttttcaatgata  13436100                                                                  <---------ICU4                                                                  --------->YAB1                                                                  <--------ATHB1                                                                  --------->ATHB12                                                                  --------->ATHB51                                                                  -------->HAHB4                                                                 <---------YAB1                                                            --------->ANAC46                                                            <---------ANAC55(2)                                                            --------->ANAC55(1)                                                            --------->ANAC58                                                            --------->ANAC55(2)                                                            ----------->GT1                             <-----------GT1                --------->ANAC58                         <---------AHL20(2)        <---------AHL20(2)                         --------->AHL20(2)       --------->AHL20(2)             --------->AHL20(1)                   --------->AHL20(1)      ----------->GT1   --------->AHL20(2)        <---------AHL20(1) ------>YAB1 <---------AHL20(1)                   <---------AHL20(2)<---------WOX13(1)    <---------TOE2(3) ------YAB1  <---------AHL20(2)                --------->YAB1    <---------ATHB51      <---------YAB1 --->CCA1(2) --------->AHL20(2)              --------->AHL20(2)  --------->ICU4       --------->YAB1 ->YAB1     <---------AHL20(2)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        --------->TOE2(3) -ATHB12    --------->AHL20(2)       --------->MYB52(1)    <-------TEIL <----------DOF2<---------AHL20(2)   tgatagttttgtaaataaattatctataaaattactatataacagataaaaataaaattgatacgtaataattgctatatcggtttaatattaatgaaat  13436200                      --------->At4g35610                      <---------At4g35610                   <------ZmHOX2a(1)                 --------->ANAC58                 --------->ANAC58              ----------->GT1                  --------------->AGL15              >>>>>>>>>>GATA-1                 --------->ATHB12                 <---------------AGL15              >>>>>>>>>>GATA-3                 -------->HAHB4                   =====================              >>>>>>>>>>GATA-4                <---------ATHB12             ------->TEIL              >>>>>>>>>>GATA-2                --------->ICU4           <---------------AtSPL3             --------->YAB1          <---------WOX13(1)                --------------->AtSPL8       -            <---------YAB1         --------->ATHB12                    <---------------AtSPL8   <----        <----------DOF2         --------->ANAC55(2)              --------->TOE2(3)   ---------->DOF2<  <-----------GT1<---------TOE2(3)<---------YAB1              <----------DOF2   <----------DOF2<-----   tgttttacttctttatgataaggaagctaagtttatgtgattgaacaaatgattaaaacaaactctttcttaaaatgtacttctttttaaagaaatttaa  13436300  Previous    Next  AGI:  At4g26630.1    Description:  GTP binding / RNA binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G55660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45121.1); contains InterPro domain DEK C terminal (InterPro:IPR014876) Range:  from: 13430533    to: 13435776    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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