Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    -                                                                                               <-----                                                                                              ------- <-------TEIL                                    <---------GLK1(1)                 <------ZmHOX2a(1)< -------->ANAC58      --------->ATHB51   <---------YAB1          ---------->DOF2<---------AtLEC2    = -------->ANAC58     <---------YAB1  <----------DOF2      <---------YAB1--------->GLK1(2)    -------- ----->MYC3      ----------->GT1     <---------DAG2      <---------ARR11(3) <----------DOF2  -------- ------MYC3 <-----------GT1       <-----------GT1--------->GLK1(1)     <---------GLK1(2) ---------->DOF2   acatgcatcacatataacatcgtataattgctgtattcactttatatttggatatccaagattatagaaaagagattcctttgcaggacccaaaagatac  13424200                                                   <---------AHL20(2)                                       --------->TOE2(3)                                      ----------------->AG                                      <---------------AGL15                                      ----------------->AGL1                                      --------->MYB46(3)       --------->ANAC58              <-----------------AGL1     ---------->DOF2                 <-----------------AG   <---------ZAT18 ----------DOF2               <---------ANAC58   --------->ANAC58 -------------->AGL15       --------->ARR11(3)   <---------ANAC55(2) --TEIL--------->ANAC58     <---------AHL20(2)   --------->ANAC58                               <---- -->CCA1(2)             <---------AHL20(2)       --------->ANAC55(2)                          <------ ---------------AGL15  <---------AHL20(2)        ----------->GT1                       --------->ARR11(3) =====================================================MADS_MADS                        <---------ARR11(3) ->ARR11(3)            --------->AHL20(2)    ----------->GT1--------->ZAT18           <---------GLK1(2) ->ARR11(1)       <-------TEIL<---------ANAC58 <--------P<---------ANAC46----------->GT1 --------->TOE2(3)   agcttttaaaagcaaatgagttcattttaatttcttgctaaccaaaatggtaagtaattttgtggacttatggtatggataaataacaaaatctcaataa  13424300                        <---------AHL20(1)                        --------->AHL20(1)                        <---------AHL20(2)               <---------ANAC46                        --------->ARR11(3)               <---------ANAC58                          <-                        --------->AHL20(2)               <---------AtLEC2                          --                        <---------ARR11(3)               <---------ANAC58                         ---                       --------->AHL20(2)           --------->ARR14(2)                            <--                     --------->AHL20(2)             <---------ARR14(2)                            <--             <---------GLK1(1)                 ----------->GT1    <-----------GT1                 ---   --------->YAB1  --------->AHL20(2)        ---------->DOF2----------->GT1                  -------- -------GT1  --------->GLK1(1)       <---------AHL20(2) <<<<<<<<<<ABI3                <-------------- ---ATHB12 <------ZmHOX2a(1)         --------->AHL20(2) <<<<<<<<<<FUS3               <---------------   accattgaaaataggaaatcaaaaaatatatttctgcatataatttgaaaagaaaatttgcatggaaataactatgtttttgaacaaactaaacatggaa  13424400      <---------At5g28300     <-----------GT1    <---------YAB1  -------->ATHB1  --------->ATHB51  -------->HAHB4  --------->YAB1  <---------ICU4  <--------HAHB4 --------->ICU4 <---------YAB1 <---------ATHB51 --------ICU4 ------->YAB1 ------>AHL20(2) -------AHL20(2)   --------->ANAC58            <----------DOF2 -------ATHB51     --------->ANAC58   --------------------->WRI1 ------>ICU4       --------->ANAC46   --------->TOE2(3)                     <----------DOF2 --->GT1   ---------->DOF2      --------->ANAC58     <----------DOF2        <---------DAG2 -AGL15  --------->LBD16        --------->ANAC58   ---------->ID1      ---------->DOF2 --AGL3<---------LBD16     <---------YAB1 ---------->DOF2         --------->GLK1(1)               >>>   ataattattaccgcaaagtacaaggcattacgataagcatccttgaaagctttgtctttttttttgggaactcgaaagctttttgtcttccagttgtaag  13424500                                                              ------>MYB83                                                              -------->P                                                         >>>>>>>>>>WRKY62                                                         <---------WRKY18(1)                                                         >>>>>>>>>>WRKY18                                                         >>>>>>>>>>WRKY40                                                        --------->WRKY12                   ------>MYB46(1)           ---------->DOF2                      <----------DOF2   <----------DOF2        <---------MYB59       <------ZmHOX2a(1)             --------->DAG2     --------->WRKY38(1)<----------DOF2 ------>MYB83      ----------->GT1            --------->AHL20(2)     --------->WRKY45   <---------------AGL15     ----------->GT1 ---------->DOF2---------->DOF2    *TSS   ------>MYB46(1)  <---------AtLEC2 >>>>>>>GT-3b   <------------CBF--------->AHL20(2)    <----------DOF2  ------>ZmHOX2a(1)--------->ANAC46   aaaaatacaggaaaaaagaattgaaaagccctaaataaaaaagtcgaaaactttagctttgaccaactctttcctctcttttcatggtagacccaactct  13424600                                                                                        <---------YAB1                 <-------TEIL                                                          --------->TOE2(3)      <-----------GT1                                <------MYB83             <---------ZAT14    <---------ANAC58                                 <------MYB46(1)         <----------DOF2    <---------ANAC58<---------At4g35610     --------->AtLEC2   <----------DOF2--------->ZAT14 ------- <---------CCA1(2)  <---------CCA1(2)     <---------AtLEC2   --------->At4g35610    <---------GLK1(2)   ctcatttcttactctctgattcatctctctctctctcttcatttccatggaaggaaggtgatgagctttctcaatctctctttactgattcttaatgaaa  13424700                                                                                ---------->DOF2                                                                      <----------DOF2                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)                                                                   <---------ARR14(2)                                                                   <---------ARR14(3)                                                                   --------->ARR11(3)                                                                   <---------ARR11(3)                                                                   --------->ARR14(2)                                                                   --------->ARR14(3)                                                                   <---------AGP1                 <---------GLK1(1)             =============================HOX2a_HOX2a             -      <----------DOF2          XXXXXXXXXXXXXXXXXXXXX>MIR4221       --------->AGP1                   < <---------At4g35610   <---------DAG2--------->At4g35610  ----------->GT1 --------->WOX13(1)    <---- --------->At4g35610   <----------DOF2         ------>ZmHOX2a(1) ----------->ARR10              <---- --->DOF2   <----------DOF2  <<<<<<<<<TBF1     ============================HOX2a_HOX2a    <-------TEIL   gtcatctcctttctctttggtatcccttttcttcttctctgcttaattcctgaccaaaaattgtgacaagatctttcaatccaaaagctatatacattaa  13424800                                                                             <---------WOX13(1)                                                                             <----------DOF2                                                                            <---------ANAC58        <                                                                            <---------AtLEC2        -                                                                     --------->ARR11(3)             <                                                                     <---------ARR11(3)             -                                                                --------->LBD16                     -                                                               <-----------RAV1(2)                 <-                                                               <---------HSFB2a(2)                ---                                                               --------->HSFB2a(2)              =====                                                             <------ZmHOX2a(2)                  -----                                                            <---------ARR14(2)             <--------- -------->MYB52(1)                                          --------->ARR14(2)   <---------WOX13(1)-- ---------DOF5.7(2)                 <----------DOF2         --------->AGP1  <---------ANAC58  ------- -----TOE2(3)          ------>ZmHOX2a(1)                    --------->ARR11(3) --------->ATHB12 ----- -----TOE1(3)         --------->TOE2(3)                <---------AtLEC2 <----------DOF2 <-----------GT1   ggtaacgatttatgaagtatttctcctcaatttcatttcttttgtttctacgagtctgcatagatccagaagagctttgcttgattgttcttactttcct  13424900  ------>ZmHOX2a(2) <------ZmHOX2a(2) ---------ARR11(3) -------->ARR14(2) ---------ARR14(2) -------->ARR11(3)                                               <---------------AGL15 -------->AGP1                                                   --------------->AGL15              - --------GLK1(1)                                                <-----------------AGL2              < -------->ARR10                                                 ===================================== ========HOX2a_HOX2a                                            <-----------------AG --------->GLK1(2) ->ZmHOX2a(1)                                                   <-----------------AGL3             <- -DOF2                                                        <---------YAB1--------->ATHB12       <- ------->GLK1(1)                      <---------AtLEC2 <---------TOE1(3)    --------->MYB52(2)     -- ---->RAV1(2)                     <----------DOF2      <---------TOE2(3)----------->GT1            -- ---->LBD16              ---------->DOF2          --------->ATHB12     <---------TOE2(3)      -------   gagatctgtttaaacttagcaaaaaaaaaaagtctactttgcatgaaatgtgtgattagggtttatgctaattttggttaattggagaatcagagagtgt  13425000                                                                                    --------->LBD16                                                                                   --------->ANAC46                                                                                   --------->ANAC55(2)      --------->ALFIN1                                                             <---------ANAC55(2)    <---------bZIP60(2)                                                           <-------TEIL    <---------ANAC46                                                              ------>ZmHOX2a(2) ----------->HVH21                                                               <------ZmHOX2a(2) -------------->AGL15                                                           <---------ARR14(2) ---------------AGL15                                               --------->CCA1(2) ===============MADS_MADS                                   <---------WRKY38(1) <---------ARR11(3) ----------------AG                                         <---------WRKY12    --------->AGP1 ----------------AGL1                                   <---------WOX13(1)      --------->ARR14(2) --------------->AGL2           <---------ANAC46       <---------ANAC58        <---------GLK1(1)    - --------------->AGL1  <----------DOF2                 <---------ANAC58  <---------At4g35610     <--- -->ALFIN1   ----------->GT1<-------GAMYB------->TEIL --------->ATHB12   --------->At4g35610     ----   tccctgatgtggaagtagtgaattactttgggttgagtaaatgtatgtctctcaattgattgtcaacgagatttgagctcgagatccgtaaccaagttga  13425100  Previous    Next  AGI:  At4g26610.1    Description:  protein kinase, putative. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G47750.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G55910.1); similar to hypothetical protein OsI_029565 [Oryza sativa (indica cultivar-group)] (GB:EAZ08333.1); similar to hypothetical protein OsJ_028605 [Oryza sativa (japonica cultivar-group)] (GB:EAZ45122.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45154.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (In Range:  from: 13424555    to: 13427325    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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