Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------YAB1                            <---------YAB1                           --------->AHL20(2)                           <---------AHL20(2)                       <---------CCA1(1)                       <---------RVE1(1)                                              --------->ANAC46                      --------->ARR11(3)                                              --------->ANAC58                      <---------ARR11(3)                                    <---------ZAT14                   <------ZmHOX2a(1)              ---------->DOF2           --------->ZAT14     ----- >REM1(1)         --------->LBD16     <---------DAG2                       <---------ZAT6       ----- >RAV1(1)       <-----------RAV1(2)   <----------DOF2               --------->AHL20(2)--------->ANAC58   atatataaaacatagcattcaggagatatttttataaatactttatcttatacaaagaaggaatttgtaatgaaatagtgtagactataagcaaaaccaa  13247500                                        --------->YAB1                                        <---------ICU4                                        -------                                       <---------ATHB12                                       <------                                       <---------ATHB51                                   --------->GLK1(2)                                  <------ZmHOX2a(2)                                      --------->ARR11(3)          --------->ZAT18         --------->CCA1(2)                                      <---------ARR14(2)        ------->MYC3             --------->ARR11(3)                 <---------TOE2(3)    --------->ARR14(2)        ------->MYC2             --------->AGP1                    ---------->DOF2<---------AtLEC2  -        <-------MYC2             <---------ARR14(2)               <---------AHL20(2)     <---------GLK1(2)        <-------MYC3             --------->ARR14(2)               --------->AHL20(2)   <---------YAB1 ---->ANAC58                     <---------ARR11(3)  --------->ARR14(2)          <-------TEIL<------- ---->ANAC58----------->GT1  ---------->DOF2         <---------ARR14(2) ----------->GT1----------->ARR10   gaaaactccatgtgcagaaaaactttggaaacaaagatccaataataacgcagaaaatatgcatagaattaaagaagaaaaaatgcatgaagattctgct  13247600                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                  ---                                                                  <----------DOF2                 ---         ---------->DOF2                                     --------->ALFIN1                     <-- --------->TOE2(3)                                         ==================bZIP_DOF             <-- ------->GAMYB        <XXXXXXXXXXXXXXXXXXXXMIR161.2        <---------TGA1a                       <--- -->At4g35610     <---------AHL20(2)                       --------->TGA1a                      <---- ---At4g35610    --------->AHL20(2)                        <---------ZAT2                       ----- -------->MYB46(3)--------->AHL20(2)     --------->ARR11(3)--------->ZAT2                       <---- --YAB1 --------->AHL20(2)   --------------->AGL15       <-----------RAV1(2)                    -----   taaccacaaataaaagagatttaattgttttctatgtattgaagaaattgaagaatacctcaggtgtgcttcttgggtagtgaatggagccagagagaag  13247700          <---------YAB1       ----------->HVH21  ------>ZmHOX2a(1) ---------HSFB2a(1) ---------HSFC1(2) -------->HSFB2a(1) ----->ZmHOX2a(2) -------->HSFC1(2)                                                                             <----- -----ZmHOX2a(2)                                                                          <---------HSFB2a(2) ------>ARR14(2)                                                                          --------->HSFB2a(2) ------>ARR11(3)                                                                         --------->LBD16 -------ARR11(3)                                                                         <---------LBD16 -------ARR14(2)           <----------DOF2  <---------YAB1                           --------->ARR14(2) ---ZmHOX2a(1)             <---------DAG2----------->HVH21                           --------->GLK1(2) -----HSFB2a(1)   --------->YAB1   ------>ZmHOX2a(2)             <---------ATHB12    <---------ARR14(2) ---->HSFC1(2)    <---------ICU4   --------->YAB1 <---------ANAC58              ---------->DOF2------ -----HSFC1(2)   <---------YAB1   <------ZmHOX2a(2)<----------DOF2           ----------->RAV1(1) ---->HSFB2a(1)--------->YAB1  <---------YAB1     <---------ANAC58 ---------->DOF2  <---------GLK1(2)   gatccttctctgaccattgatgatcacagctttacgatcgtaagtgacaattgctttaactgaacaaatcaaagatgaacaacaaagaatccccagaagt  13247800                                                                                 ----------->GT1                                                                                --------->ALFIN1                                                                              --------->ALFIN1                                                                            <---------ANAC58                                                                            <---------ANAC46                                                                            <---------ANAC58                                                                            --------->ALFIN1            --------->LBD16         --------->TOE2(3)                     <---------ANAC58         --           <---------LBD16          <---------------AGL15                 <---------ANAC46  <--------      <----------DOF2             ---------->ID1                          <---------ANAC58  ---------     <---------DAG2     ------->GAMYB------>ZmHOX2a(1)                  <---------ANAC58    --------- ----HSFC1(2)        <-----------GT1--------------->AGL15               <---------ANAC58    <-------- --->HSFC1(2)--------->LBD16  <----------DOF2                        <----------DOF2  ---------->DOF2   atccatgccttttccctgaaatttaaccccatctttttccttatttgcaaacctttggatgttttttttttctttggtgtgtgtggagaaaagaagattc  13247900                                                                                                 <---                            <---------ANAC58                                                   ------                            <---------ANAC58          ===============================================                       --------->ATHB12               ----------------->AGL3                  <------                       --------->ATHB51         <---------HSFB2a(2)                        <---------YAB1                       -------->ATHB1         <-------TEIL                                 --------->ICU4                      <---------YAB1         --------->ARR11(3)                   <-----------HVH21 ------->ANAC46   <---------ANAC58           --------->GLK1(2)                  ------->MYC3<--------HAHB4 -HSFB2a(1)       <---------ANAC58           <---------ARR14(2)     <---------TOE2(3) --------->At4g35610 >HSFB2a(1)       <---------ANAC46           --------->ARR14(2)     <---------TOE1(3) <---------At4g35610 >HSFC1(2) <---------ANAC55(2)        --------->CCA1(2)  <-----------TBP        <-------MYC3<-------- -HSFC1(2) --------->ANAC55(2)     *TSS   <---------TOE2(3)<---------AHL20(2)<---------ALFIN1--------   caccgaaaatgttatgtattgggtattattgggtttggagttatgaggttcttgaagctatttatagattaaggttgacacacatgtcatctcattatta  13248000                                                                    --------->YAB1                                                                    <---------ICU4                                                                   <---------YAB1   --------->TOE2(3)                                               --------->ICU4   --------->YAB1                                               <---------AHL20(2) --------GT1          <---------ANAC58                         --------->AHL20(2)       <---------YAB1 --->YAB1             <---------ANAC58                         --------->AHL20(1)     --------->YAB1 ============================================MADS_MADS         <---------AHL20(1)    <---------AHL20(2) ---YAB1           <---------ZAT18                        <---------TOE2(3)          --------->AHL20(2) -ICU4   <------ZmHOX2a(1)   --------------->AGL15     --------->ICU4          <-----------GT1 ->AHL20(2)      <---------------AtSPL8           ----------->GT1--------->YAB1--------->YAB1    ----   tactatcttaaggagtattagagtacttgcaccaaaatgagaacatttgggagagtaattaagaatataatcatggataaataacaatttataattctcc  13248100           --------->ARR11(3)          <---------ICU4          --------->ATHB12         --------->ICU4          <---------YAB1                                           -----------         <---------YAB1         <---------AHL20(2)                                    --------->ZAT14       --------->YAB1           <---------AHL20(1)                                    <---------ZAT14       <---------ICU4         <---------YAB1                                   --------->PCF2       <      <---------ATHB51     --------->ICU4                                     --------->TCP20       <      --------->ICU4  <---------YAB1                        --------->AHL20(2)<---------PCF2        <      <---------ATHB12<---------TOE2(3)---------->ID1       <---------AHL20(2)--------->TCP15(1)    < -->ZmHOX2a(1)        <---------HSFB2a(2)      <---------YAB1            --------->MYB52(2)        <-   tattgccaataatgattttgaattatggaagtattatttttgtctcattgtcatttacaaattttaatcggaagttagtgggacccagtttacttcattt  13248200        <----------DOF2  ----------->GT1  <-------GAMYB  <------NtERF2  <---------At4g35610                                                          <-------TEIL  --------->At4g35610           ------------>AtMYB77                          <------ZmHOX2a(2) --------->MYB55(2)          <---------ANAC58                                --------->ARR14(2) <---------MYB46(3)     <------MYB83                                         --------->ARR11(3) ---->AGL15 <-----------GT1  <---------ANAC58                                --------->AGP1 ---------ANAC58        <------MYB46(1)                                <----------DOF2 ---------DEAR3(1)   <---------ANAC58                            ------>ZmHOX2a(1)   <-----------GT1< ---------ANAC58     <---------ANAC58                            ====================HOX2a_HOX2a   <- ---------ANAC46     <---------ANAC46          ----------->GT1<-----------GT1<---------ARR14(2)    <- --------LBD16   <---------MYB52(1)    -------->P            <-----------GT1 <---------ARR11(3)    --   gggcgggtgactttaaacccttggcttggtaccttgccagttaccagttgagtaatttgcaattttcctatttctttaagatccattttcccattttcta  13248300               <---------ANAC46        <---------ANAC58       ------>MYB83        <---------ANAC58       ------>MYB46(1)                                   <---------AHL20(2)      <-----------GT1        <---------MYB59                      --------->AHL20(2) ---------AHL20(2)        <-----------GT1              --------->YAB1--------->AHL20(2)   ---------->ID1 --------AHL20(2)    <---------AHL20(2)             --------->WOX13(1)          --------->AHL20(2) --------AHL20(1)    --------->AHL20(2)    --------->CCA1(2)     --------->AHL20(2) <---------AHL20(2) ------->AHL20(2) ----------->GT1       ----------->ARR10      --------->TOE2(3)<---------AHL20(2)   attttttttttcttgttgagtagttaaataaccaaacacacttagatatgaaatctatcaaatttcattaaaaaaatccaaattaaatatttgtctctaa  13248400  Previous    Next  AGI:  At4g26140.1    Description:  BGAL12 (beta-galactosidase 12); beta-galactosidase. Identical to Beta-galactosidase 12 precursor (BGAL12) [Arabidopsis Thaliana] (GB:Q9SCV0;GB:Q8LPL0;GB:Q9SZI5); similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to BGAL2 (beta-galactosidase 2), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G52840.1); similar to BGAL4 (beta-galactosidase 4), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT5G56870.1); similar to pear beta-galactosidase1 [Pyrus communis] (GB:BAE72073.1); similar to beta-galactosidase [Pyrus communis] (GB:CAH18936.1); similar to beta-galactosidase precursor [Car Range:  from: 13243085    to: 13247935    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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