Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                <----------DOF2          <---------O2                                                    --------->ZAT18          --------->TGA1a                                                 <---------ZAT18          --------->O2                                                   --------->ALFIN1          <---------TGA1a                --------->YAB1              ---------->DOF2         --------     --------->bZIP60(1)                --------->ICU4             ----------->HVH21         -------- -------YAB1   <---------ZAT18          <---------YAB1           <---------ANAC46    --------->ATHB12   atgtttgatgccacttgtgcggttttctttggacaatgtgtaatgatatgttattcatatgggagatgtgtgaaagtgggctttggatgatgggcaagag  13223900                                        <---------At5g28300                                        -------->P                 ---------->DOF2                                     --------->At4g35610    --------->ATHB51                                   --------->YAB1           <---------ICU4               --------->TOE2(3)  <---------ATHB12          -------->ATHB1         --------->ANAC58        ------>MYB46(1)           <---------AHL20(2)     --------->ANAC58            ------>MYB83              --------->ICU4     --------->ANAC46           --------->WOX13(1)         <---------ATHB51     --------->ANAC58        ------->TEIL                  --------->AHL20(2)                   ----- ->ANAC58--------->ANAC46   <-----------GT1 <---------MYB52(1)<---------YAB1              <---------AHL20(2) ->ANAC58--------->ANAC58--------------->AtSPL8      <-----------GT1    ----------->GT1   <---------YAB1   acaaaatacccaagacacctcaaatacaatgtaccaatcatctaccgttttttttttacaaattattacaaaagtagaaaaaacattgattttttattga  13224000                                                                                             <-------                                                         --------->AHL20(2)                  <-------                                                         <---------AHL20(2)                 <--------                                                        --------->AHL20(2)                  ---------                                                        --------->AHL20(1)      <---------WOX13(1)                                                        <---------AHL20(1)    --------->ATHB12                                                        <---------AHL20(2)   --------->AHL20(2)   <--                                                  --------->YAB1             <---------AHL20(2)   <--       <----------DOF2        <-----------------------TaNAC69(2)            <---------WOX13(1)<------ ----->DOF2               ---------->DOF2     --------->ZAT6      <---------AHL20(2)     <---------MYB52(1)   aagctatttcttttagataaactgagaagaaagccgagacaaatatgaacactagtaatttattttgtttaatgtgtgattaattgaatttgttagcttt  13224100        <---------ANAC58        <---------ANAC46        <---------ANAC58                                                                           <-       <---------LBD16                                                                            <--  <---------YAB1                                                                        <-------TEIL --ANAC58                                                                             --------->At5g28300 --ANAC58 ------>NtERF2                                                              ----------->GT1 -At4g35610                                                --------->DAG2           --------------->AtSPL3 >At4g35610  ---------->DOF2              <---------MYB46(3)                        <---------------AtSPL8 -------ANAC58                        <------MYB83  ----------->GT1                 --------------->AtSPL8 -------ANAC58                        <------MYB46(1)     ---------->DOF2         --------->MYB52(1) ----DOF2--------->LBD16             --------->MYB59--------->ANAC55(1)       ---------->DOF2   -----   ccttgcgattgcgggcaaagtggataagagaagtagaagtaggtttgttctaactcgtaataaagtcacagaactaattctaaagaacggtacatatatc  13224200                                               <---------WRKY18(1)               <---------ARR11(3)                                              ----------->HVH21         --------->ARR11(3)                                            <---------ANAC58            <---------ARR14(2)      <---------ICU4                     --------->ZAT14             --------->MYB46(3)   --------->YAB1                       <---------DAG2    --------->AHL20(2)----------->GT1 --------ICU4                           <----------DOF2<----------DOF2  --------->ARR14(2)      ----- -------YAB1           <---------------AGL15--------->ANAC55(2)    ----------->RAV1(1)    --------->TOE2(3) ---->YAB1            ----------------->AGL1<---------ANAC58      <----------ID1 --------->ARR11(3)   atcattcataagtacttgatgtctcccattttcggtgaaacactttacttgaccagtctttttaatatgcaacaaatcttgtatatattcaacataaaaa  13224300         <------------CBF ------>MYB83        --------->ATHB12  ------>MYB46(1)        -------->ATHB1    ----------->RAV1(1)        <---------ICU4  --------->MYB46(3)       --------->ICU4   <---------MYB59       <---------YAB1<---------WRKY18(1)    ------------>ATHB5 --------->ANAC46   ------->TEIL     --------->WRKY38(1) --------->ZAT18    --------->WRKY12           *TSS ---->AHL20(2) <------------CBF   <-----------GT1 ---------->DOF2                        <---------O2   aaatgcaccatcattggaattgttgacccaacaaaaaaaccctataggcattaaaaggctcttagagggccaattttgttatcgggccttcacttggcca  13224400                                                  <---------CCA1(2)                                            --------->GLK1(2)                                           <---------ARR14(2)                                       <                    --------->MYB52(1)     <---------GLK1(2)                                        <                    ----------->RAV1(1)    --------->KAN4(2)                             --------->ANAC58                 --------->ANAC58         <---------HSFB2a(1)                            --------->ANAC46                 --------->ANAC46         <---------HSFC1(2)                --------->ANAC58      <--                 --------->ANAC58         --------->HSFB2a(1)               --------->ANAC46 --------             --------->ANAC58             --------->HSFC1(2)                --------->ANAC58 --------             --------->AtLEC2          <------ZmHOX2a(1)                    --------->bZIP60(2)   ---             --------->ANAC58       <---------HSFB2a(2)            <---------ANAC58      --------->ANAC58         --------->ANAC46           --------->HSFB2a(2)         <---------CCA1(2)    --------->ANAC58         --------->ANAC58   --------->HSFB2a(2) ------>ZmHOX2a(1)  <---------ANAC58  --------->ANAC58         --------->ANAC58   <---------HSFB2a(2) <---------CCA1(2)  <---------ANAC46  --------->ANAC46   gtagaaattacaagcatgcaaacaacagttcgagacttcgaggaagattcctatctctctctactcgtttcttgaaccaagtcatacaagcaagcaagac  13224500                                                                        ----------->GT1                                                                        --------->ANAC58                                                                        --------->ANAC58                                                            <---------MYB52(1)                                                          --------->MYB111(1)       <---------TOE2(3)                                  --------->MYB52(2)      ---------->DOF2                                     --------->MYB111(2)    <---------YAB1                                        --------->MYB46(2) ---------DAG2                                   <---------YAB1<---------At4g35610 ----------DOF2           <---------ICU4 --------->ANAC46 --------->MYB59 -------At4g35610   <----------DOF2 <---------WRKY38(1) <---------MYB52(1)  ---------->DOF2 ->ANAC58      <----------DOF2 <---------YAB1   <----------DOF2--------->At4g35610           <------- ->ANAC58  --------->WRKY12<----------DOF2     <---------ICU4 --------->MYB59              --------->GLK1(1) ------>At4g35610   --------->TOE2(3)  <---------ALFIN1------------>MYB.PH3(2)  ---------->DOF2   agctttattaaagttgactttactttaatctttatgagtcaacacctcatctttattagttagttagctcagacaagtaaaagaaagagcgagaaatcat  13224600                                              <---------ANAC58                                              <---------ANAC46                                         --------->ALFIN1          <------NtERF2                   --                                       <---------At4g35610 ------->TEIL                            --                            <---------MYB46(3)<---------ANAC58    --------->LBD16          ------>ZmHOX2a(2)                <---------CCA1(2) --------->ZAT14  ------->TEIL  <---------ANAC46        --------->ARR11(3)      --------->GLK1(1)   <---------MYB52(1)<---------ANAC46    <---------LBD16          <---------ARR11(3)      <---------GLK1(1)<---------YAB1<-----------RAV1(2)<---------YAB1       <------ZmHOX2a(1)     -- --ATHB12  <---------At4g35610    <---------ZAT14  --------->GLK1(2)         =====================HOX2a_HOX2a   cgaaatggatttcatctcatctcttatcgttggctgtgctcaggtgttgtgtgaatctatgaatatggcggagagaagaggacataagactgatcttaga  13224700                                                                    ------>ZmHOX2a(2)                                                               <---------ANAC55(2)                                                               --------->ANAC55(2)               ----                                             <---------ANAC58  --------->ANAC46               -------                                             --------->ANAC46 <---------LBD16                 <------                                             <---------ANAC55(2)   <------ZmHOX2a(2)          -------                                             <---------ANAC58--------->MYB52(1)               <------                                <---------ANAC58           <---------DAG2                     <------            ------>ZmHOX2a(2)   <---------ANAC58       ----------->HVH21                      -------          --------->ARR11(3)    <---------ANAC46      <---------MYB59                         -------          <---------ARR11(3) ----------->HVH21       --------->At4g35610          <---------HSFB2a(2) ------->ANAC46             <-----------HVH21<---------ANAC55(1)  --------->ARR14(2)         ------->TEIL ------->ANAC58         --------->MYB52(1)   --------->ANAC55(2)  <---------ARR14(2)   <----------ID1 ------->ANAC58    --------->MYB46(3)     <---------SPL7   <----------DOF2        --------->HSFB2a(2)   caagccatcactgatcttgaaacagccatcggtgacttgaaggccatacgtgatgacctgactttacggatccaacaagacggtctagagggacgaagct  13224800  Previous    Next  AGI:  At4g26090.1    Description:  RPS2 (RESISTANT TO P. SYRINGAE 2). Identical to Disease resistance protein RPS2 (RPS2) [Arabidopsis Thaliana] (GB:Q8LKZ8;GB:Q8LKZ9;GB:Q8LL00;GB:Q8LL01;GB:Q9ASP5); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G12280.1); similar to RFL1 (RPS5-LIKE 1), ATP binding / protein binding [Arabidopsis thaliana] (TAIR:AT1G12210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65320.1); similar to RPS2 [Arabidopsis lyrata] (GB:AAM90858.1); similar to RPS2 protein [Brassica oleracea] (GB:AAF19803.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains Inte Range:  from: 13224347    to: 13227881    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g26095.1    Description:  other RNA Range:  from: 13224347    to: 13227631    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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