Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->DAG2                               --------->ATHB12                          <         --------->YAB1                                  <---------ATHB12                     -------        <---------ATHB12       <---------------AGL15     --------->MYB46(3)                   <------      --------->WOX13(1)       --------------->AGL15    ------>MYB46(1)                  <------MYB46(1) -----------AGL15         <---------ATHB12              ------>MYB83                     <------MYB83 ---------->AGL15        ------>MYB46(1)               --------->WOX13(1)              <---------MYB52(1) ------------AGL2        ------>MYB83                --------->MYB46(3)              <---------ANAC46 ----------->AGL2     --------->MYB46(3)            --------->ANAC58                ------>ZmHOX2a(2) ----------->AGL3--------->YAB1--------->HSFB2a(2)  --------->ANAC58 <------ZmHOX2a(2)--------->LBD16   acaattagcaatcaaaaattgataaccaatcttctacaattagtcatctattgcaaccaatcactggatggatcaaaatgtattgatccgtaggtgagct  13214000                                                                                        ------>MYB46(1)                                                                                        ------>MYB83                                                                                        --------->ANAC46                                                                                      --------->AtMYB61                                                                                      <---------MYB59                                                                                     --------->MYB46(3)                                                                                    -------->P                                                                                   --------->MYB52(1)                                                                                 <---------MYB52(2)                                                                                 <---------MYB46(2)                                                                              <---------AHL20(2)                                                                          <---------RVE1(1)                                                                          <---------CCA1(1)                                                                         <---------ARR14(2)  <---------ANAC55(2)                                                    --------->ARR14(2)  --------->ANAC55(2)                                                    <---------ARR11(3) -----------GT1                     --------->MYB52(1)                   --------->ARR11(3)--------->TOE2(3) -->At4g35610                    --------->YAB1---------->DOF2 <---------ATHB12<-----------GT1 ---At4g35610                   <---------AHL20(2)           --------->GLK1(1)--------->AHL20(2)   tattacataacacagaggtctaagtagtaagtatataataactgaaacccaaagtagtttgagaaatcaatgccagatatttaactaaccaaaccacaaa  13214100                                                                                     ---------->DOF2                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                                                 <-----------------AGL1                                                                       --------->ANAC58                                                                    --------->At4g35610                            =================================HOX2a_HOX2a       --------->ZAT18                            ------>ZmHOX2a(1)                       <---------At4g35610                --------->At4g35610    ------>ZmHOX2a(1) <---------TOE2(3)---------->DOF2          --                <---------At4g35610    ======================HOX2a_HOX2a ------->GAMYB--------->DAG2        --------->TOE2(3)------>ZmHOX2a(1)            ------>ZmHOX2a(2)--------->ANAC58--------->DAG2     <-----------GT1     ====================================HOX2a_HOX2a--------->MYB46(3)     ------   atagaattaacctttgtttgcagactcctccttctcgtctccttcatcgttttcgatctgaggtaatgtctgcaaccaaagtgaacgaaaagggaaatga  13214200                              --------->GLK1(1)                             <---------GLK1(2)                             <---------ARR14(2)                             --------->ARR14(2)                          --------->ANAC46                          --------->ANAC58        <---------ARR11(3)--------->ANAC58  --------->YAB1         <---------LBD16 <---------YAB1          --------->LBD16                --------->At4g35610 ------->YAB1           <---------ALFIN1                <---------At4g35610         <-------TEIL----- --->AHL20(2)          <---------REM1(2)     <---------AHL20(2)           <---------ALFIN1  ---------   attatcagaacatctatctccattctccacggattttcaaaacatatttttttggttcagctagacatttcatcgaacaccttacatacatttgtaaaga  13214300                         --------->ARR11(3)                    ----------->GT1                  <---------ANAC58                   <---------ZAT2                  <---------ANAC46                   --------->At4g35610                  <---------ANAC58              ------>NtERF2              ------>ZmHOX2a(2)                 --------->LBD16             <------ZmHOX2a(2)                 <---------DEAR3(1)             --------->CCA1(2)                <------NtERF2            <---------AGP1                    <---------LBD16            --------->AGP1                    --------->ATERF1(1)                            <-------            <---------ARR14(2)               <---------ATERF1(1)                          -----------            --------->ARR14(2)              <---------ARR14(2)                            -----------            --------->ARR14(3)              --------->ARR14(2)                      --------->ANAC58            <---------ARR14(3)            <---------ATERF1(1)                       --------->ANAC58            --------->ARR11(3)           <---------DEAR3(1)                         --------->ANAC46            <---------ARR11(3)       <---------LBD16 --------->ZAT2           <---------ETT(2)    <---------MYB52(2)   --------->AHL20(1)--------->ATERF1(1)                --------->WRKY38(1) ----->DOF2<---------GLK1(1)        --------->MYB52(1)           --------->REM1(1)<---------ALFIN1 ->DOF2 --------->ANAC55(2)        ----------->HVH21 <---------At4g35610      --------->ETT(2)  -----   aagacaacttacgagatctggcttgtatatattgtgaacgacggaggctccggcgagcagagaggctacaactacgactgtcgaccacgctagtgacggt  13214400                  >>>>>>>>>E2Fd                 --------->LBD16                 ------>NtERF2                --------->ANAC58                --------->ANAC46                --------->ANAC58       <------NtERF2      ------>NtERF2     <---------DEAR3(1) --------->AHL20(1)    <---------MYB52(1)  --------->AHL20(2)                                     <----------DOF2   <-----------HVH21    <---------AHL20(1)                                    <---------ANAC58  --------->ANAC46>>>>>>>>>E2Fc                                   ---------->ID1 --DEAR3(1)     <<<<<<<<<<E2Fa                                 --------------->AtSPL8 >TGA1<---------DEAR3(2)<---------AHL20(2)                ---------->ID1      <---------ANAC58   ---- >HVH21<---------At4g35610                ---------->ID1 <------------------------ANAC81     <------ZmHOX2a(1) ---->ALFIN1   <---------LBD16      <----------DOF2   <----------DOF2   <----------DOF2  <---------ATHB12   gttcccgtcggcttcttcccgccaaatttattgttcatctttttgtctcttcgatgctttgtttttttgttcttctttttgctttgggcaaatcaggaaa  13214500                                                           --------->YAB1                                                --------->AHL20(2)             ---------->DOF2                                                <---------AHL20(2)        ----------->GT1                                               --------->AHL20(2)         --------->YAB1                                               <---------AHL20(1)        <---------YAB1                                               <---------AHL20(2)    <---------ANAC58                                            <---------AHL20(2)       <---------ANAC58                                            --------->AHL20(2)       <---------ANAC46                                            --------->AHL20(1)   <------------CBF     ------->GAMYB  --------->YAB1         <---------AHL20(2)  <---------AHL20(2)        ------>ZmHOX2a(1)  <-----------GT1 <-----------TBP          --------->AHL20(2) --------->AHL20(2)--------->DAG2 ----->ICU4--------->ATHB12         ----------->GT1  <-----------GT1--------->MYB59    ----------->RAV1(2)   ttagtaacagtcttgatttcatttatagtctatagaagttgataaataatttaatttacacttataaaattgggtatgataaaaagtactcctgcttcaa  13214600                   <---------ATHB12                      <---------ICU4                   ------------>CBF                     <---------YAB1              --------->YAB1                          <---------ICU4                  --------->YAB1          <---------AHL20(2)                          --------->YAB1                  --------->TOE2(3)         <---------YAB1                            --------->YAB1                     ------->GAMYB       <--------HAHB4                             <---------AHL20(2)                 --------->MYB46(3)       --------->ATHB51 ------------>CBF        --------->YAB1             <---------ICU4       <---------ICU4--------->WOX13(1)       --------->ICU4  <---------YAB1  <---------ZAT6        <      --------->ICU4<---------ICU4          --------->YAB1<----------DOF2 --------->ICU4          ---   aatcgtccataattaatggtaatcaatccaatttctactgcatttgtcataaataatcatctttattcttgatgtaatcagtgttcaaccaaaatactga  13214700                                                                 -------->P                                                               --------->MYB46(3)          <---------                                                        ---------->DOF2           --------->ATHB51                                                      --------->ANAC58           <---------YAB1           --------->YAB1    ----------->GT1          --------->ANAC58         --------->YAB1 <<<<<<<<<<<<<<<<LFY ----------->GT1             --------->At4g35610          --------->AHL20(2)   -- ------>MYB46(3)   --------->At4g35610           <---------At4g35610          <---------AHL20(2)   <-   acaaacactggtttcataagaagcagaaaaaatgtaaaaacatttcattcgagctcaagaaagaaacaaccatttactcatttattattgtattttctgt  13214800               <---------ARR14(2)               <---------GLK1(2)               <---------ARR11(3)               --------->ARR11(3)           --------->ZAT14           <---------ZAT14                                                                          <         --------->ANAC46                                                                        <---    <---------ZAT18                                                                      <---------ARR11(3)    --------->ZAT14                                                                     <---------CCA1(2) --GT1 --------->ANAC46                                                             <---------AHL20(2) ------------------->WRI1                <---------ANAC58     --------->GLK1(2)     --------->AHL20(2) ---------DOF2 --------->ARR14(2)        <---------ANAC58 --------->YAB1    ----------->GT1      ----   tctttgtacacactgcagatttttgagaagaaaatgatacagagcttgagagaggtctaactataatctgtgtatatagggtttatatatatatctaagt  13214900  Previous    Next  AGI:  At4g26055.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G57080.1) Range:  from: 13214107    to: 13214438    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g26060.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G57060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65021.1); contains domain PTHR10052 (PTHR10052); contains domain PTHR10052:SF2 (PTHR10052:SF2) Range:  from: 13214755    to: 13216470    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version