Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <------NtERF2                  --------->LBD16                 <---------ANAC58                 <---------ANAC58                         --------->ANAC58                    -------                <---------LBD16                           --------->ANAC46                    <------              --------->ARR14(2)                          --------->ANAC58        --------->At4g35610              <---------ARR14(2)                          --------->bZIP60(2)     <---------At4g35610   tcttcatctaaaatcgattccgcgtcgaaatcgtctaaaactccaaacccattcacctccaagtcatcaaaactgacttccttctgctccaagaagtgtt  13193200                                                       --------->ANAC58                                                       --------->ANAC46                                                       --------->ANAC58                                                      --------->SPL7                                                      <-------TEIL                                                      ------->TEIL                                                      --------->SPL1(2)                                                      <---------LBD16                                                     <---------SPL1(1)                                                     --------->SPL1(1)                                                    <---------SPL7                                                   <---------ANAC58                                                   --------->ANAC55(2)                                                   <---------ANAC55(2)       <-------TEIL                                                   <---------ANAC58       --------->HSFB2a(1)                                                  <-------TEIL   --------->MYB52(1)                                                  <---------------AtSPL3  <---------HSFB2a(1)                                                 <------------------SPL14 <---------HSFC1(2)                                                <---------ARR14(2)        --------->HSFC1(2)                                         --------->HSFB2a(2)  --------->ANAC58     <-------GAMYB          <---------GLK1(2)   --------->ARR14(2)--------->At4g35610 -->ZAT14       <---------TOE1(2)        <---------HSFB2a(2)  --------->ANAC46 ---ZAT14    --------->ATHB12            ------>ZmHOX2a(1)    --------->ANAC58  ---------->ID1  <----   ctgttttcgttggaatcgttggattgaacagaaactcgttctcctcgatggatacgtacggaagaagcaactgagaagcttcgtcgtaatcactgagagg  13193300                                                                               <---------At4g35610                                                                               <---------HSFC1(2)                                                                               --------->HSFC1(2)                                                                               --------->HSFB2a(1)                                                                               --------->ZAT2                                                                               --------->At4g35610 <-                                                                               <---------ZAT2    <---                                                                             <------NtERF2      <----                                                                            --------->LBD16     <----                --------->GLK1(2)                                          --------->RAP2.3(2)  <----                <---------ARR11(3)                                         --------->DEAR3(1)  <-----                <-----------ARR10                                         --------->RAP2.3(1)  <-----                <---------ARR14(2)                                       --------->At4g35610   <-----                --------->ARR11(3)                                      --------->ARR14(2)    <------            --------->LBD16                            <--------P       <---------ARR14(2) --------->ATHB12           --------->LBD16                          <---------TOE1(3)  <---------GLK1(1)  <---------YAB1          <---------HSFB2a(2)                       <---------TOE2(3) ----------->ARR10  <---------TOE1(2)  --------->ATHB12                            <---------ARR11(3)     <------ZmHOX2a(1)   <---------TOE2(2) --------->AHL20(2)        <-----------GT1    --------->ARR11(3) <---------ANAC46 <-------TEIL------- --ZmHOX2a(1)   --------->ARR14(2)          ----------->ARR10 --------->ALFIN1 <---------HSFB2a(1) <-   agatttattagtcccgaaaatctgagtttttgccttcttggaagagaagattttagggtaagcggtggagaggagagccgcagcttcgtcgtatgtttgg  13193400                                                                                                    <                                                                                                    <                                                                                                    -      <---------ARR14(2)                                                                           --      --------->ARR14(2)                                                                           <-     --------->DOF5.7(2)                                                                           <-    --------->HSFC1(2)                                                                             <-    <---------HSFC1(2)                                                                             <- -----MYB46(1)                                                                                    <-- -----P   --------->LBD16                                                               --------->ALFIN1 ---GAMYB<---------ANAC58                                                            <------ZmHOX2a(1) -----ANAC58                                                                   --------->At5g28300<-- -----ANAC58                                                                 <---------DEAR3(1)   <-- ----MYB46(3)     <---------ANAC58                                           <---------ANAC46     --- -MYB83  <---------ANAC58                                                  --------->MYB52(1)     <-- -MYB46(1)<---------LBD16                                                 ----------->TGA1        <-- ---AtMYB61       --------->MYB52(2)                                      ----------->HVH21       <-- -->MYB59<---------ANAC46    <---------ANAC46    <------ZmHOX2a(1)      --------->At4g35610       <-- -----MYB83       <---------ANAC58        --------->MYB52(1)            <---------At4g35610    ------   ttgggacgtttccgtggagttcgtggccttctcgtggagattgagaacggaggagagtttgtctcagagattgtagatgacggtgaaggagtgttgtttg  13193500   <------NtERF2   --------->ATERF1(1)  ------>NtERF2  <---------DEAR4(2)  <---------ATERF1(1)  <---------ERF1  <---------ORA47(2)  <---------RAP2.3(1) <---------RAP2.3(2) <---------RAP2.3(3) --------->DEAR3(1) <---------DEAR3(1) <---------ANAC46 <---------RRTF1(3) ---------ABI4(1) ------NtERF2 -------->ATERF1(1) ---->NtERF2 --------ATERF1(1) --------RRTF1(1) --------ERF1<---------ICU4 --------RAP2.3(1) -------RRTF1(2)                                                                     <---------ARR11(3) -------RRTF1(3)                                                                     --------->ARR11(3) -------RAP2.3(3)                                                             --------->HSFB2a(2) ------>ATERF1(2)                                                             <---------HSFB2a(2) -------RAP2.3(2)                                                             --------->LBD16 -------DEAR3(1)                                      ----------->RAV1(2) --------->GLK1(2)      <--- -------ATERF1(2)                                     <---------At4g35610 --------->ARR14(2)    <---- -------RAP2.6(2)                           <------ZmHOX2a(1)             <---------ARR14(2)<-------- ----->HVH21<---------YAB1    --------->CCA1(2)     <-----------GT1--------->ATHB12  --------->GLK1(2)   acggcggcgatttcatcatttccaactcgaagctataggcacaagaggacattttcacctgtggacgtttgattagaatccgagaaaaatcttgatgact  13193600             <---------TOE2(3)                   ---------->DOF2             <---------TOE1(3)         <----------ID1                          <---------ZAT6            <---------DOF5.7(2)        ----------->GT1           <---------ANAC46       <---------TOE1(3)              ----------->GT1            <---------ANAC58      --------->TOE1(3) ----GAMYB  ---------->DOF2           ------------------------>ANAC81          ----------->GT1     -- -----MYB46(3)                      ---------->DOF2              <---------ANAC58      --------->TOE2(3) -YAB1 <---------TOE2(3)         <---------TOE2(3)       ---------->DOF2     <------------CBF     ---   gttgaatttgaggttaaagttagtgtgtgttttttaagaaaaggaaaaatataaagtcagaaagttttcgtatgaagtctattgttaaaccctaaaccct  13193700                                ----------->GT1                --------------->AGL15                <---------------AGL15               =========================================MADS_MADS               <-----------------AGL3                                            <---------HSFB2a(1)               ----------------->AGL2                                            --------->HSFB2a(1)     <---------ARR11(3)        ----------->GT1        ----------->GT1----------->GT1     --------->GLK1(2)        --------->DAG2         --------->DAG2--------->ZAT14     <---------ARR14(3)       <---------TOE2(3)    ---------->DOF2 <---------ZAT18            -------     --------->ARR14(3)     ---------->DOF2   ----------->GT1      <---------ZAT14    ------>ZmHOX2a(1)     --------->ARR11(3)----------->GT1  --------------->AGL15 <-------TEIL---------->DOF2----------->GT1 ------->YAB1  <-----------------AGL2   <---------------AGL15--------->GLK1(2)   --------->HSFC1(2) -------->HVH21----------------->AGL3  --------->TOE2(3)  ----------->ARR10      <---------HSFC1(2)   atgacaaaatcttgtttactaaatatagcaaaaaggttaaaacttaaatggggaaaaggtaagattcagtatactaaaaaggaaactcctacagaaaaaa  13193800                                                                                  <---------WOX13(1)                                                                                --------->ATHB12                                                      ---------->DOF2           <---------MYB46(3)                                               <---------GLK1(1)               --------->ICU4      --           <---------TOE1(3)                   --------->GLK1(1)           <------NtERF2           --           <---------TOE2(3)    <-----------HVH21   --------->LBD16        --------->ZAT18     ------ --->DOF2  <---------YAB1  <------NtERF2      <---------ICU4          --------->ALFIN1         ------   gaagagaacatttaagattagagagaggcagagaggtcatggaagtaagaattccccaaagagagagagagagagggggcagtgattggattgggagaag  13193900                                     <---------TOE1(3)                                  <---------MYB52(1)                               <-------TEIL                               ------>ZmHOX2a(2)                              <------ZmHOX2a(2)                              --------->ARR14(1)                             <---------ARR14(2)                             --------->ARR14(2)       <---------ANAC46      <---------ARR11(3)            <<<<<<<<<<WRKY63       <---------REM1(1)     --------->ARR11(3)     --------->AHL20(2)    <---------AtMYB61      ----------->ARR10      --------->TOE2(3)                                 - ------->ANAC58          ---------->DOF2         <---------ICU4                             --------- ------->ANAC58     ----------->GT1  <---------TOE2(3)   ----------->GT1                --------->ATHB12 --->ANAC58       ---------->DOF2 <<<<<<<<<MYB98 --------->YAB1                       <---------WOX13(1) --->ANAC58  ---------->DOF2--------->RVE1(1)   <---------ATHB12                    --------->ATHB12<   cacgagatggtgtaagaaagaaaagagaaaagatccgttagggtttgtcaaacattatatagtcaaataagttgagtctctctgtttgattgattagtga  13194000                                                                   <---------STY1(1)                                                                   --------->STY1(1)                                            ---------->DOF2   <<<<<<<<<AtERF-4  --------->YAB1                      ----------->GT1         <---------RAP2.3(1) <---------YAB1                      --------->DAG2          <---------RAP2.3(2) -------->ARR11(3)                  ---------->DOF2          <---------RAP2.6(2)     ------>MYB83 -->GT1 <----------DOF2       ----------->GT1--------->DAG2--------->MYB52(1)        ------>MYB46(1) ---------ARR11(3)           <-----------------------TaNAC69(2)  <----------DOF2   <---------MYB59<--   aatatcatcactttgttgatgcgaaaacagagaggtcaaaaagtgaaaaagtgagagggagtagcggctctagggggaagagagacctaatgtagttttc  13194100  Previous    Next  AGI:  At4g25990.1    Description:  CIL. similar to CIA2 (CHLOROPLAST IMPORT APPARATUS 2) [Arabidopsis thaliana] (TAIR:AT5G57180.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO15544.1); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 13191946    to: 13193552    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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