Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->AHL20(1)                                      <---------ARR11(3)                                          <--                                      --------->ARR11(3)                                         <---                                     --------->CCA1(1)                                           ====                             ----------->HVH21                                             --------->AtMYB61                       --------->ARR14(3)                                                  --------->TOE2(3)                       <---------ARR14(2)                                                  --------->TOE1(3)                       <---------ARR11(3)                                                  <---------DAG2                       <---------ARR14(3)                                                ------->TEIL                       --------->GLK1(2)                                 --------->ATHB12-------->P                       --------->ARR11(3)                      <---------LBD16           ============ --ZAT18      --------->ATHB12       --------->RVE1(1)     <-----------HVH21         --------->TOE2(3)   tagaaatgaattgtcttgatttgaaaatcttgtgacaaaatatcttacatttttgtaatactgtccctggatgagttattgcatttacatcaaccttacc  13189000                                                      --------->ZAT6                                                    --------->MYB52(1)                                                 <---------At4g35610                                           ===============================HOX2a_HOX2a                                          <---------GLK1(1)       <---------ANAC46                   --------->GLK1(1)    ----------->HVH21                     ================================HOX2a_HOX2a   <-----------HVH21                      <------ZmHOX2a(2)   <-------MYC3                          <---------AGP1   ------->MYC3                          <---------ARR14(2)  --------->ANAC46                       <---------ARR14(3)  --------->ANAC55(2)                    --------->GLK1(2)  --------->O2                           --------->ARR11(3)  <---------O2                           --------->ARR14(2)  --------->TGA1a                        <---------ARR11(3)                                 ---------  <---------ANAC55(2)           <---------WOX13(1) ----------->HVH21                        ---------  <---------TGA1a  ==============================HOX2a_HOX2a                        <-----------RAV1(1) ---------HVH21    ===============================HOX2a_HOX2a      ------>ZmHOX2a(1)<---------ZAT6 -------DOF2  <-----------GT1<---------YAB1------>ZmHOX2a(2)  <------MYB83        <---------At5g28300 ===========bZIP_DOF         <---------TOE2(3)   --------->At4g35610             <-----------GT1 ===========MYC_MYB<------ZmHOX2a(1)    <------ZmHOX2a(1)     <------MYB46(1) --------->MYB52(2)   tttcacgtgacatgtattacaggactcgattaagattgatgaggatctcttagctaacagtgctaggtccttggagacattagttactgttggaatgcaa  13189100                                                                                 --------->At4g35610                              <---------ZAT18                                    <---------At4g35610                 --------->ZAT2                                                <-----------RAV1(2)                 <---------ZAT2                                              ----------->RAV1(1)              ---------->DOF2 <---------ZAT14                               --------->ANAC58             <---------------AGL15                                          --------->ANAC58            <-----------------AGL2                                        --------->MYB52(1)        <            <-----------------AGL1                                     --------->ANAC58            <-            ----------------->AG------->TEIL                           --------->ANAC58            <-            ----------------->AGL1         <---------ZAT14             --------->ANAC46           --- >ANAC58    ----------------->AGL2         --------->ZAT14        <---------------AtSPL8          <-- >ANAC58 <----------DOF2      --------->ZAT14                     <---------------AtSPL3     <-------   cttggtgtctcctttccaaagctggaaaactgtgtacttgagccctgaactgcttcaaactatgtgagttagtacgaaacgacagatgattttctatggt  13189200    --------->ATHB12 <<<<<<<<<MYB80                   ---------->DOF2 -----MYB46(1)                  --------->ANAC58                                          --------->ANAC46 -----MYB83                     --------->ANAC58 ------>ZmHOX2a(1)                    <---------AHL20(2) ------>MYB59          <---------DAG2    ------------>CBF              <----------DOF2----------->TBP -------AtMYB61        <----------DOF2<---------ARR11(3)       ------------>CBF     ----------->TBP --TOE2(3)          <-----------GT1   --------->ARR11(3)      --------->ANAC46    <-----------TBP  <-   ttggtttgatttgatttagttttcacttttcatcaagaaagaactcaattcctctctgtttaatacacaatgactttgctctgtatatataaacaccagt  13189300               --------->ANAC55(2)             <---------YAB1           --------->YAB1          <---------ZAT6                                                       --------->ANAC58        ----------->GT1        <---------MYB52(1)                              --------->ANAC46     ------>NtERF2           <---------TOE2(3)                    ----------->HVH21     ----------->GT1    --------->LBD16          --------->ANAC46                  <---------TOE2(2)       --------->DAG2   --------->LBD16         <-----------GT1         <---------ANAC58            --------->AtLEC2   <---------ANAC46     <---------ICU4             <---------ANAC58        <-----------GT1        ---   <---------LBD16     --------->ICU4              <---------ANAC46 ------------>CBF   <---------TOE2(3)  <---------LBD16     <---------TOE1(3) <----------DOF2        <---------TOE1(2)       <---------TOE1(3) ----------HVH21      <---------TOE2(3) <---------DAG2        ------>ZmHOX2a(1)--------->ANAC58   <--   atgtcccgggcagtgatacttgttaatgtttacggtatttcgctttttttgttgagtgtttttcctaggtgacaattttacatgcaaataaggttaaaca  13189400                                                                   <-----------GT1                    --------->ICU4                            <----------DOF2   <---------ALFIN1 ---->MYC3     --------->LBD16             <-----------GT1<----------DOF2<----------DOF2 -----MYC3   <---------LBD16    <----------DOF2        <------------------------ANAC81   catgtctgtctctattccggtcttaatgaagagactttgtctgtataactctctctctctctttctttttcacctctttccctcaccctctctggctctc  13189500                                                                                              <------                                                                               <---------TOE2(3)          <---------ANAC46                                                     <---------TOE1(3)       <---------MYB52(1)                                                     <---------At5g28300      <-------GAMYB        <----------ID1                                    <-----------GT1  -------     <-----------RAV1(1)---------->DOF2                          <----------DOF2              <------   tcattctctgttgagttgaacttactaaaagcacaaatggtttgggcaaatgctaagatgaggctagctttgtctcttgttacggttttcttcggcatct  13189600                                                                 <-------GAMYB      <----------DOF2      --------->GLK1(2)                                --------->YAB1           <---------At4g35610 - ---CCA1(2)            <-----------GT1                <---------ATHB12  <-----------RAV1(2)         - -->At4g35610      <---------ARR14(2)               --------->WOX13(1)  <---------LBD16 <---------ETT(1) ---At4g35610      --------->ARR14(2)    ---------->DOF2--------->TOE2(3)     <---------DEAR3(1) ----   ctcttgctaatcttgaagtcggattttactccaatacatgccctcaagccgagtcaatcgttaagagggttgtctcaggggctgctctttccgaccctaa  13189700                                            <---------------AtSPL8                                            <---------TOE2(3)                                     <----------DOF2                                    <---------ANAC58     <----------DOF2                               <---------ICU4          ------->TEIL   --------->ANAC58            --------->ATHB12 <-------TEIL   --------->ANAC46           --------->ICU4<---------TOE1(3) ------>ZmHOX2a(1)                ------   --------->ANAC58     <XXXXXXXXXXXXXXXXXXXXMIR420  --------->ZAT14                  <---------ANAC46 ----->MYB46(1)     ------>NtERF2   <---------ANAC58 <---------ZAT18      <----------DOF2  <--------- ----->MYB83    --------->ANAC46 <---------WOX13(1)  <---------ZAT14 <---------ANAC58 <---------ANAC58 ----->MYB46(3)<---------LBD16<---------YAB1--------------->AtSPL3   <---------ANAC58 <---------ANAC58   cctcccagccatacttctacggctccatttccatgattgctttgttgaggtacaatgcactttcctccccttcgtgctttctactattgcttgctattct  13189800                <-------TEIL               <-----------HVH21              <-------MYC3              <-------MYC2           <---------ALFIN1            ------>ZmHOX2a(1)                                         ----         ------->GAMYB              <------ZmHOX2a(2)                                            <---        --------->MYB46(3)         --------->ARR14(2)                                           <----      <-----------GT1    ----------->HVH21     --------->MYB52(1)                        <-----------HVH21 --->TOE2(3)  ------->MYC2         <---------ARR14(2)                    ------->TEIL   <---------ANAC58 ------AGL15  ------->MYC3       ----------->ARR10------->GAMYB ---------->DOF2         <---------ANAC58   tagagatttaaccacacgttcagggatgtgatggctcgatcctcgtgaacaacggagcaatctctgaaaagaatgcatttggacatgaaggcgttagagg  13189900  Previous    Next  AGI:  At4g25970.1    Description:  PSD3 (PHOSPHATIDYLSERINE DECARBOXYLASE 3); calcium ion binding / phosphatidylserine decarboxylase. similar to PSD2 (PHOSPHATIDYLSERINE DECARBOXYLASE 2), phosphatidylserine decarboxylase [Arabidopsis thaliana] (TAIR:AT5G57190.1); similar to phosphatidylserine decarboxylase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD87120.1); similar to Unknown (protein for MGC:36892) [Mus musculus] (GB:AAH27143.1); similar to hypothetical protein OsJ_004732 [Oryza sativa (japonica cultivar-group)] (GB:EAZ14907.1); contains InterPro domain Phosphatidylserine decarboxylase; (InterPro:IPR005221); contains InterPro domain Phosphatidylserine decarboxylase Range:  from: 13184123    to: 13189444    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g25980.1    Description:  cationic peroxidase, putative. Identical to Peroxidase 43 precursor (PER43) [Arabidopsis Thaliana] (GB:Q9SZH2); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT1G77100.1); similar to class III peroxidase [Gossypium hirsutum] (GB:AAL93153.1); contains InterPro domain Plant peroxidase; (InterPro:IPR000823); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016) Range:  from: 13189402    to: 13191516    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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