Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------ZAT14          --------->ZAT14         <---------ANAC46         --------->ALFIN1       <---------ANAC46      <---------AtMYB61      <---------DEAR3(1)      --------->ALFIN1     <---------ABI4(1)     --------->ATERF1(1)     <------NtERF2    ------>NtERF2   <---------DEAR3(1)   <---------RAP2.3(3)   <---------RAP2.3(2)   <---------RRTF1(3) <---------MYB46(3) -------->ALFIN1 ---TEIL<------NtERF2                                             <---------YAB1                    < --->CCA1(2)                                                     <---------ARR14(2)             <---- --->ARR14(1)              --------->ZAT14                       --------->ARR14(2)         --------- ---ARR14(2)         --------->YAB1                              --------->ARR11(3)         --------- -->ARR14(2)       --------->GLK1(2) ----------->HVH21           <---------ARR11(3)     <---------GLK1(2) -->ARR11(1)  <---------ZAT6      <---------ZAT6      --------->ARR11(3)   <---------ARR11(3)   <---- -->ARR10<---------REM1(1) <---------ZAT14            --------->GLK1(2)    --------->ARR11(3)------>ZmHOX2a(1)   cgatgggggcggtgtagtgagaatcatgctgcagtagtggtgacatacttgatgagcatcttgacaatatccttggagacctttgaactagattccttaa  13173900                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                <----           <<<<<<<GRF7                                                                          -----       <---------ICU4                                                                           <----      --------->ICU4                                                            <---------YAB1  ----- -------TEIL                                                                 --------->GLK1(2)  <---- -----TOE1(3) --------->At4g35610        --------->At4g35610         ----------->GT1           ------ >TOE1(3)----------->HVH21               <---------At4g35610        --------->DAG2             <----- >TOE2(3)------>ZmHOX2a(1)--------->At4g35610                     ---------->DOF2<---------------AtSPL8 -----TOE2(3) <---------At4g35610       ------->TEIL  ------>ZmHOX2a(2) ---------->DOF2   <---------ATHB12   ggttcgtaatcctgacatctgtctcatcatctaaacgttttgcatctgcttcttgatccgtctgaaacaaaaggtaaagaatatgagtacaaatcaagat  13174000 ----->ARR11(3)                                                         =========================HOX2a_HOX2a ------ARR11(3)                                                         ------>ZmHOX2a(2) ---->CCA1(1)                        <---------GLK1(2)                 --------->At4g35610 -----CCA1(1)                      --------->LBD16                     ==========================HOX2a_HOX2a ---->GLK1(1)                    <---------LBD16                       <------ZmHOX2a(2) -----GLK1(1)                 -------->P                              --------->ARR14(2) ---->RVE1(1)              <---------ANAC58                           <---------ARR14(2) -----RVE1(1)              <---------ANAC58                           <---------ARR11(3) --->ARR11(3)         <-----------RAV1(1)                  <xxxxxxxxxxxxxxxxsmallRNA(i) ----ARR11(3)         --------->ALFIN1             <-----------GT1<---------LBD16         ------>ZmHOX2a(1)   atctcactagccggttttgtttcggtgttgcttaccccagaaacttgagtttgatactcttcttctaatcgggatctgtattcttccatctccttctcag  13174100                        <---------ANAC58                        <---------ANAC58                       <---------STY1(2)                       --------->STY1(2)                  <---------YAB1             ------>ZmHOX2a(2)             <---------ANAC58               <------ZmHOX2a(2)                    <------ZmHOX2a(1)             <---------ANAC58              --------->ARR14(2)      ---------->DOF2             ------         <---------ANAC58                  <---------ARR14(2) ---------->DOF2---------->DOF2   ------         <---------ANAC58       <---------At4g35610      ---------->DOF2--------->At4g35610    <-----    <----------DOF2<---------ICU4    <---------YAB1 --------->AtLEC2--------->DAG2             <-----   cctcatctttcgcttgcttcattcttgctagttttgctgatcatcgatccgtccatacaaaaagaaaagaaaagcgctgaaaaggattcaaaaccaaaat  13174200                                                                      --------->LBD16                                                                    --------->SPL7                                                     <---------At4g35610                        -----                       --------->DAG2                --------->At4g35610                        -----    <---------YAB1    ---------->DOF2                <---------ZAT2<---------SPL1(1)            <---- <---------YAB1 --------->ANAC46                     ----------->RAV1(2) <----------DOF2       ------ --->ARR11(3)   --------->ANAC58                 --------->ANAC46 <---------SPL7          ---------->DOF2 --->GLK1(2)    --------->ANAC58                ------>ZmHOX2a(1) <-----------HVH21--------->At4g35610 ----ARR11(3) ---------->DOF2---------->DOF2<-----------HVH21 --------->GLK1(2)    <---------At4g35610 ------ARR10  --------->MYB46(3)      <---------ZAT14--------->ZAT2<---------MYB52(1)----------->GT1   cttactattagagccaacaagccataaaggagaaagagactataccggtcctcgcagctgaaacaatccgtccggcttcttgttcagcagttaaaagcat  13174300                                                                                           ----------                                                                                           <---------HSFB2a(2)                                                                                           <---------                                                                                           <---------                                                                                           --------->HSFB2a(2)                                                                                          <----------                                                                                          <------NtERF2                                                                                          -----------       --------->ZAT2                                                                     -----------       ----------->RAV1(2)                                                                -----------       <---------ZAT2                                                                     <----------     <---------ALFIN1           <---------ANAC58          --------->DAG2                 ------>NtERF2 ------>RAV1(2)                 <---------ANAC58         ---------->DOF2    <---------HSFB2a(2) ---->At4g35610         --------->GLK1(2)     ---------->DOF2   <---------ANAC46      <---------ANAC58 -----At4g35610    ---------->DOF2          *TSS       --------->YAB1       --------->HSFB2a(2) --->GLK1(2)---------->ID1      <---------ANAC46  ------------>CBF   --------->KAN4(2)<---------ANAC58   ctgaatcccaccttggcctcttaaagaatccatggcttatgttctcttcaaagacaatgaaaagttgtgtttattcttctgcaaattttggtgccagaag  13174400    ----------->GT1 ----->AGL15 ------AGL15                   <---------ANAC46 --RAV1(2)                  <---------TOE1(3)                                               <-------- -------AGL1                <---------TOE2(3)                                            <---------ICU4 ------>AGL1                <---------YAB1                       <-------TEIL            --------->ATHB51 ------>AGL2           <------MYB46(1)                        <---------MYB46(3)        <---------YAB1 ------>AGL3           <------MYB83                          <---------TOE1(2)          --------->ICU4 -------AGL2       <---------ARR14(2)                 <-----------GT1      --------->MYB52(2)  <-----   tggaatttgtaaatataagcctatttggttatggtttggattagacggagagtgtttttctccttggttcatggagttagtttttgactcattatttctt  13174500                                                                                   <---------------AGL15                                                                                   --------------->AGL15                                                                                  <-----------------AGL3                                                 --------->ALFIN1             --------->YAB1                                               --------->ALFIN1       --------->ARR11(3)                                             <---------ANAC46         <---------ARR11(3)                                             <---------ANAC58       <---------ARR11(3)                                             <---------ANAC58       --------->AHL20(1)              -                                        --------->LBD16             <---------AHL20(1)   <---------HSFB2a(2)                                      <---------LBD16               --------->ARR11(3)   --------->HSFB2a(2)                                    ------>ZmHOX2a(2)          --------->AHL20(2) ----------------->AGL2                    ---------->DOF2--------->GLK1(1)           --------->AHL20(1) <-----------------AGL2 ---GT1  <---------At4g35610       <---------GLK1(1)           <---------AHL20(2) ----------------->AGL3 -----DOF2    <----------DOF2      <------ZmHOX2a(2)  ----------->GT1<---------CCA1(2) <---------AHL20(2)   tcttcaaatttagatgcttttaaaaagacaatgtgcgatctccgggtgagtgtggaaggaaaaaataaaatatatctcaaacatactatttatagaaaat  13174600                                                                                                <----                                                                                                <----                                                                                          ------->MYC3                                                                                          <-------MYC3                                                                                         <---------O2                                                                                         <---------TGA1a                                                                                         ============                                                                                         --------->TGA1a                                                                                         --------->O2                                                                                         ============                --------->At4g35610  --------->ANAC46                            <---------GLK1(1)---          ---------->DOF2<---------ANAC46                                   ---------->DOF2--------->ALFIN1  --------->MYB46(3)  ------>ZmHOX2a(2)                                     =======================bZIP_DOF -------->P     <---------ZAT2       --------->ANAC55(1)                   <---------AHL20(2)   <---- ------>MYB46(1)--------->ZAT2   <-----------GT1   <---------AHL20(2)     <---------AHL20(2)    <---- ------>MYB83   <---------At4g35610  --------->ANAC58                     --------->AHL20(2)<-------- -------->MYB52(1)----------->HVH21  --------->ANAC58              ----------->GT1--------->GLK1(1) -   cccaaccgattacaaagcagctgatcggtgtgtatttacaagtaatgtgtgatttttttttttgaaaaatcgtgaattaaaaggaatcccaacgtgtgag  13174700       ---------->DOF2 -----ANAC46                                <---------YAB1 -----bZIP60(2)                --------->TOE2(3) =================bZIP_DOF   <------ZmHOX2a(2) =================bZIP_DOF  --------->ARR14(2)       <------NtERF2 ------>ALFIN1              <---------ARR14(2)      ------>NtERF2 -----ANAC58            <---------DOF5.7(2)<---------TOE1(2) -----ANAC58           --------->WRKY12    <---------TOE2(2) ---HVH21          --------->DAG2 --------->ATHB51  <---------RAP2.6(3)                         ----- ---------->HVH21 ---------->DOF2 <---------ICU4   <---------ANAC46           <-----------RAV1(1)----   gtgtgactctaaagtctgaataaagttgacgatccataattttcttatgtttgccgtcgattgtgagaattgagaagcatatgtggtttctcttctaaga  13174800  Previous    Next  AGI:  At4g25950.1    Description:  VATG3 (VACUOLAR ATP SYNTHASE G3). Identical to Vacuolar proton pump subunit G 3 [Arabidopsis Thaliana] (GB:Q9SZH0); similar to VMA10 (VACUOLAR MEMBRANE ATPASE 10) [Arabidopsis thaliana] (TAIR:AT3G01390.2); similar to VMA10 (VACUOLAR MEMBRANE ATPASE 10) [Arabidopsis thaliana] (TAIR:AT3G01390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49947.1); contains InterPro domain Vacuolar (H+)-ATPase G subunit (InterPro:IPR005124) Range:  from: 13173762    to: 13174344    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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