Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <-----------RAV1(2)                                             --------->TGA2(2)                                            <-----------TGA1                                            <-----------HVH21                                           --------->ANAC55(2)                                           --------->ANAC58                                           --------->O2                                           --------->ANAC46                                           --------->ANAC58                                           ===================bZIP_DOF                                           <---------ANAC55(2)                                           --------->TGA1a                      <---------TOE1(3)    --------->bZIP60(2)    <---------ARR11(3)               <- ------->YAB1         <---------TOE2(3)   <-------TEIL      ---------->DOF2                  <------- ---YAB1        --------->ATHB12--------->ALFIN1   <----------DOF2--------->ARR11(3)         --------   atgatgttttttgtcaattcatttgaggttgaatgtgtgagtgatacgtcaggcttttgagaaaaagagttcttaaatactatatgtctatatgagattt  13146900                                  ------>ZmHOX2a(1)                     --------->ARR11(3)                    --------->AHL20(2)                     --------->AHL20(1)                    <---------AHL20(1)                     <---------AHL20(1)                    <---------AHL20(2)                   --------->AHL20(1)                     --------->AHL20(2)                   --------->ARR11(3)       --------->AHL20(2) ----------GT1     <---------AHL20(1)       <---------AHL20(2) --ARR11(3)        <---------ARR11(3)      <---------AHL20(2)                <-------TEIL ->ARR11(3)--------->MYB52(1)  <-----------GT1  --------->YAB1           <---------YAB1      <-------   ttcacctatgtaataacagaaaatattttgtttttcctctacaaaattatttataatccattaaatttgaaaatgaagattcaatctacttctctgttat  13147000                                                                         --------->YAB1                                                                         -------->HAHB4                                                                        <---------YAB1                                                                      --------->YAB1                                                                     <---------AHL20(2)                                                                     --------->AHL20(2)                                                                    --------->AHL20(1)                                                                    <---------AHL20(1)                                                                    <---------AHL20(2)                                                                    --------->AHL20(2)                                                                 <---------ICU4                      --------->YAB1                             --------->AHL20(2)                    <---------AHL20(2)        <---------ATHB12   <---------AHL20(2)            <---------ANAC46                --------->WOX13(1)   --------->ATHB51            <---------ANAC58               <---------AHL20(2)    <--------ATHB1            <---------ANAC58            --------->YAB1          <---------YAB1       <---------ARR14(2)            --------->YAB1    --------->At4g35610                     <-----       --------->ARR14(2) --------->GLK1(2)--------->AHL20(2)   --------->ICU4                 ------  ----------->GT1   --------->AHL20(2)--------->AHL20(2)      --------->YAB1                   ------ --MYB52(1) <---------AtLEC2       --------->AHL20(2)  <---------At4g35610         <---------ICU4   tcgatggtgaatttgcatgtattaaaataatctgtgttaaaataataaatcaatttcatctccataataatttaataatagttaagcattagggcaacct  13147100                                                            ------->GAMYB                                                           --------->ANAC58                                                         --------->MYB52(1)   ---------->DOF2                                --------->MYB52(1) <---------AHL20(2)                        --------->MYB52(1)   <---------ALFIN1               ------ ----DAG2                ----------->TGA1------>ZmHOX2a(2) --------->ANAC58                    ------ --->TOE1(3)       --------->TOE2(3)   ------->TEIL --------->MYB46(3)<------ZmHOX2a(2)      <------- --->TOE2(3)       --------->TOE1(3)   <---------AGP1  <---------MYB52(2)  <---------ATHB12-------->P   tatttaaaagcattaagcgagccttaaatgacgaaaacatggatctaacgagtaacgactaacgcccctccgatcgaatcaatagttaatgctaacccaa  13147200                                                                                                 <---                                                                                                 ----               ------>ZmHOX2a(1) <---------STY1(2)                                               ---- >MYB46(1)<---------GLK1(1)  <---------STY1(2)          <---------WOX13(1)        --------------->AtSPL8 >MYB83<---------YAB1  <----------DOF2                 <------------CBF     <-----------GT1      ---- --MYB59  --------->GLK1(1)  --------->STY1(2)     ---------->DOF2     <------------CBF     <--------   ctctctattttgatatcctatctatctttctagctagctatatagatggagcaaaaagattgatactactagtaattgtcactatatgtactacttagta  13147300                                                         <---------------AGL15                                                         --------------->AGL15                                                         --------->TOE1(3)                                                         --------->TOE2(3)                                                        <-----------------AG                                                        ----------------->AGL2                                                        <-----------------AGL3                                                        <-----------------AGL1                                                       -------->P                                                ----------->GT1                                              ---------->DOF2                                    <-----------GT1  <---------MYB111(2) --------->ANAC58                <---------ICU4--------->DAG2         --------->AHL20(2) --------->ANAC58                --------->AHL20(2)  <------------MYB.PH3(2) ------ANAC55(2)                <---------AHL20(2)   --------->MYB46(3)      <---------ZAT6 ----->ANAC58                   --------->AHL20(2) <-----------GT1    <---------AHL20(2)           -- ----->ANAC58           --------->TOE2(3)   <---------HSFB2a(2) ----------->GT1            <---------DAG2 ----->ANAC55(2)    <----------DOF2*TSS<----------DOF2------->GAMYB<---------ICU4          <--------- -------AtSPL3  ---------->ID1--------->YAB1--------->HSFB2a(2) --------->YAB1      --------->ATHB12   cgtaagtcatagctccttggctcttttcttaaaaataatttcttttccaaaagtaacaacctcaaatggtaattacttagtgtgagtcattgactttttg  13147400                                          <---------AHL20(1)                                    <------ZmHOX2a(2)                                   --------->ARR11(3)                                   --------->AGP1<-------GAMYB                                   <---------ARR14(2)                                          ------                                   <---------ARR11(3)   <---------ARR14(2)                    -------                                   <---------AGP1<---------ANAC58                            <-------                              <-----------GT1    <---------ANAC58                            <-------                         --------->AHL20(2)     <---------MYB46(3)                          ---------                        --------->AHL20(2)--------->AHL20(1)   --------->At4g35610          <--------    ----------->GT1 <---------TOE2(2)------>ZmHOX2a(2)  --------->ARR14(2)                 <--------- -------->DOF2   --------->ANAC46  --------->ARR14(2)<---------ANAC46             --------->ANAC58 -DOF2     --------->YAB1<---------AHL20(2)<---------YAB1      <---------At4g35610--------->ANAC58  <   gtaaagaagtgaatcatacacgtagattaaatttacagatctaatatttttggttgtgtataggcagaagaagagaaaatgagaaggcaacttgtgctgg  13147500                                                                  ===================================                                                                  ===================================                                                                  ------>ZmHOX2a(1)             -----                                                                 --------->TOE2(3)             <-----                                                                ====================================HOX2a_HOX2a                                                                ------>ZmHOX2a(2)             <------                                                               =====================================HOX2a_HOX2a                                                               <------ZmHOX2a(2)              -------                                                              <---------GLK1(2)               <------                                                              <---------ARR14(3)              <------                                                              --------->ARR11(3)              -------                                         --------->At4g35610  <---------ARR14(2)              -------                                         --------->ZAT2       <---------ARR11(3)              <------                                         <---------At4g35610  --------->ARR14(3)             ========    <----------DOF2               --------->ZAT2              --------->ARR14(2)             <------ZmHOX2a(1)   --------->TOE2(3)              <---------At4g35610         --------->AGP1                 <------- >NtERF2                    --------->GLK1(2)               ----------->ARR10        --------->SPL7 -->ATERF1(2)              --------->ARR11(3)            --------->LBD16             <-------TEIL --ANAC58                ----------->ARR10              --------->ANAC46             ------->TEIL --ANAC58        <---------At4g35610----------->HVH21   --------->ANAC58           <---------SPL7  <- >At4g35610 <---------HSFB2a(2)   <---------ZAT2        --------->ANAC58         --------------->AtSPL3 -At4g35610 --------->HSFB2a(2)   --------->At4g35610  <---------LBD16           <---------------AtSPL3 --RAV1(1) <---------LBD16 <---------GLK1(2)      <-----------HVH21            ------------------>SPL14 ---------ALFIN1 --------->At4g35610--------->ZAT18   --------->At4g35610   <---------ICU4--------->HSFB2a(2)   ccaaacctttttctctggaagatgagaaagattctgagctcacagcttcaagtgtcatccgcaagatcctcagtctcattaagaccgtacgtccaggatc  13147600 ------>ZmHOX2a(2) ==HOX2a_HOX2a =HOX2a_HOX2a ->ZmHOX2a(2)                                                                                     <-- -ZmHOX2a(2)                                                                                      --- ---ARR11(3)                                                                                      --- -->GLK1(2)                                                                                       --- ---ARR14(2)                                                                                      <-- ---AGP1                                                                                          --- -->ARR14(2)                                                                                     <--- -->ARR11(3)   <---------At4g35610                                                     <-----------GT1 -----ARR10    --------->At4g35610                            --------->MYB52(1)     <---------AHL20(2) =======HOX2a_HOX2a      --------->TOE2(3)               <-----------GT1           <---------AHL20(2) --GLK1(2)   <-----------RAV1(2)  <---------ANAC58   --------->AHL20(1)      <---------ANAC46    <--- ----------ARR10 ----------->GT1  <---------ANAC58   <---------AHL20(1)--------->MYB46(3)        ----   tgatctcaccaattttcaggtgtaatttcttaaaatccttgtctaatttttgttatatattacagaacggacaaccattgtgtatattttttctatacaa  13147700       <---------AHL20(2) -------ICU4 ----->ATHB1                                     <----------DOF2 ------>ATHB12                         --------->ATHB12 ------>YAB1                           <---------ICU4 ------ATHB1                          <---------YAB1 ------>ATHB51                      --------->YAB1                                --------->YAB1 ------YAB1                       <---------TOE2(3)                     --------->ANAC55(2) ------ATHB12                     <---------TOE1(3)                 <----------DOF2        <---------AtLEC2 ----->ICU4         ---------->DOF2 <------ZmHOX2a(1)        <---------ZAT6     xxxxxxxxxxxxxxxxxxxxx   tcattgaatttttttggtgaagaaaagtttttttttaaggataattgccctcttttttttttagtgttttctttacatatcaaataatactgtgcatgaa  13147800  Previous    Next  AGI:  At4g25850.1    Description:  oxysterol-binding family protein. similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT4G25860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64037.1); contains InterPro domain Oxysterol-binding protein; (InterPro:IPR000648) Range:  from: 13143657    to: 13146939    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g25860.1    Description:  oxysterol-binding family protein. similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT4G25850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64037.1); contains InterPro domain Oxysterol-binding protein; (InterPro:IPR000648) Range:  from: 13147335    to: 13149615    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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