Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->YAB1                                                                                      <---------TOE1(2)  --------->REM1(1)                                                                   --------->SPL7 ------MYB46(3)                                                                     --------->TOE1(2) ------->GT1                                                           --------->AHL20(2) <------ZmHOX2a(2) ---MYB83                                                        <---------MYB59    <---------SPL7 ---MYB46(1)     <---------AHL20(2)                         <---------DAG2          --------->TOE2(2) ---->MYB59  <---------AHL20(2)                             <----------DOF2       --------------->AtSPL3 ->ATHB12   <---------AHL20(2)                          <---------ATHB12          <---------------AtSPL3 -YAB1  <---------MYB52(1)                            --------->WOX13(1)          ------->TEIL ------   ggttacatctgttttttatttattctatgtaagtatatttgtattcgaatattgatcaatcactttaccaaaataaaacatttgaacgtacgatcagaaa  13129900                                          --------------->AtSPL8                                          --------------->AtSPL3     --------->ATHB12 <--------HAHB4                       ----------->GT1   <---------At5g28300         --------->ATHB51 <---------ICU4                      --------->DAG2    <-----------GT1             <---------YAB1   <---------YAB1                     ---------->DOF2--------->DAG2               <---------YAB1      --------->ICU4                   ------->GAMYB   ---------->DOF2            --------->GLK1(2)    --------->YAB1 ---->DOF2   --------->AtMYB61 <----------ID1                <---------GLK1(2) ------>ZmHOX2a(1) ----   agtttaagtcatagacctcaacgaaaagtaaaaacgaaaaagttactgtacattattttctgagattcttattattgattcctaagcataattaagctat  13130000                               <---------ATHB12                                  <----------DOF2                          >>>>>>>>>>>>>>>>>LFY    --------->GLK1(2)             <---------DAG2 --------->AHL20(2)     <-----------GT1           --------->ARR14(2) <---------AHL20(2) <---------AHL20(2) <---------AHL20(2)    <---------ATHB12           --------->AHL20(2) ----->AHL20(2)    --------->AHL20(2) <---------YAB1  ------>ZmHOX2a(1) <---------YAB1  ------>ZmHOX2a(2)   aaattatatgctattagactattaaataacccaatgttttatcaataagtagaatccttcaactcttctaatttataaatggccttttgatctaaactaa  13130100                           -------->HAHB4                           --------->YAB1                           --------->ATHB51                           <---------ICU4                           <--------ATHB1                          <---------YAB1                          <---------ATHB51                        <---------ICU4                        --------->YAB1                       --------->ICU4                         ------->TEIL                       <---------YAB1                         --------->GLK1(2)                     <---------ICU4                        <---------MYB52(2)                     --------->YAB1                        --------->ANAC46                    --------->ICU4                         --------->ANAC58                    <---------YAB1                --------->AHL20(2)                 --------->MYB59                  --------->YAB1      ----------->HVH21    --------->ANAC58       --------->REM1(2)               --------->YAB1      <---------AtMYB61      --------->LBD16      <---------ANAC46           ---------->DOF2--------->ICU4          --------->YAB1              <----------------------   tgtctagcacaaaaaaagaataataataataattgttttggtgacacagaaataatattccacgaacctgtctatgttgaaccgtgtaaggtcgaataac  13130200                                     ========================================bZIP_DOF                                     --------->TGA1a                                     <---------O2                   --------->AHL20(2)         <---------AHL20(2)          <---------TGA1a    --------->ANAC58         <---------YAB1              --------->bZIP60(2)--------->ANAC58       <---------ICU4                --------->ANAC46   --------->ANAC46   --------->MYB46(3)   --------->AHL20(2)                --------->O2      --------->LBD16   <-----------GT1--------->ANAC46   <---------AHL20(2)              <---------ALFIN1 ------>NtERF2   ----------->TBP     --------->bZIP60(2) -TaNAC69(2)                 --------->ZAT6      ------->TEIL     <----------DOF2  <-----------GT1   tcgatttaaatattattacatacaaagtttaagactaccacgtcgataatgtgcctccacgaaactctctttatataaccacttatttccacttcatcta  13130300                                                                         ------>MYB46(1)                                                                         ------>MYB83                                                                         --------->MYB52(1)                                                                       --------->AtMYB61                                                          <---------ANAC46                                                          <---------ANAC55(1)                                               ----------->GT1         <---------MYB59                                               --------->LBD16         ------->GAMYB                                              <---------LBD16         --------->MYB46(3)                                             <---------LBD16         --------->ANAC58                                   --------->MYB52(1)     <---------ANAC58                        --------->ANAC46   --------->ARR14(2)        --------->ANAC58                     ----------->HVH21     --------->GLK1(2)     --------->ANAC58                -------->P <---------ANAC46<---------ARR14(2)    --------->ANAC58        ---------->DOF2<---------LBD16    <---------GLK1(2) --------->ALFIN1         <---------MYB46(3)      *TSS     <-----------GT1     ----------->RAV1(1)    <---------bZIP60(2)      <-------GAMYB ----    <---------ETT(2)<-----------HVH21 ------->GAMYB       <---------ANAC58        <-----------RAV1(1)   aatccatcgacaaagacttacctctcacggcgagaaacaacagagaatcggggaaaaatggcgtgtttcgcaaccaaacagcctctgttgttgtctctcc  13130400                                       <---------HSFC1(2)                                       <---------HSFB2a(1)                                  <---------ATERF1(2)                                  --------->ATERF1(2)                                  --------->LBD16                                  --------->RAP2.6(2)                                  --------->HSFB2a(2)                                  <---------ANAC46                                  <---------HSFB2a(2)                                 <---------LBD16                       --------->At4g35610                       <------NtERF2   --------->HSFC1(2)                      <---------MYB46(3)                     <---------RAP2.6(2)                                                    <--------                  <-----------RAV1(1)--------->ARR14(2)                                 --------->ARR14(2)                  <---------AtMYB61 <------NtERF2                                       <---------ARR14(2)                <-----------RAV1(1)--------->LBD16                                    <---------ARR11(3)           <----------DOF2   --------->At4g35610                                   ----------->RAV1(1)          <---------ANAC58  ------->TEIL                  <---------GLK1(1)  <---------ANAC58          <---------ANAC58<------NtERF2--------->HSFB2a(1)--------->bZIP60(1)<---------ANAC58 -->ZmHOX2a(1)<----------DOF2<---------At4g35610     <----------DOF2     <---------AtMYB61  ---------   tccttgccattggcttctttgtggtggctgcatctgccggaaacttctatgagagctttgatatcacttggggtaatggtcgtgccaacatattcgagaa  13130500                                                                               <---------DDF1                                       <---------TOE1(3)                     <------ZmHOX2a(2)                                  ------>NtERF2                             --------->ARR11(3)                                  --------->LBD16                     <------MYB83                                <---------LBD16                       ----------->GT1         <------    <---------GLK1(2)          <---------ATERF1(1)                    <------MYB46(1)  --------->At4g35610   --------->At4g35610       <---------GLK1(1)                       --------->MYB46(2)<---------At4g35610   <---------At4g35610      --------->ARR14(3)            <------ZmHOX2a(1) <---------ARR11(3)<------   <---------ZAT2           --------->ARR11(3)            ==========================HOX2a_HOX2a  <--- -HSFB2a(2)                 <---------ARR11(3) --------->WOX13(1)    --------->MYB59  ------->TEIL >HSFB2a(2)          ----------->HVH21<-----------RAV1(2) <---------------AtSPL8    ---------->DOF2   tggacagcttctcacttgtactcttgacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgacatgaagctcaagctt  13130600                         --------->ATERF1(1)                         --------->DEAR4(2)                        <---------At5g28300                        <---------ATERF1(1)                       <---------ALFIN1                     <-----------HVH21                     <-----------TGA1                    --------->DEAR3(1)                    --------->bZIP60(2)                                --------->ARR14(2)                   <------NtERF2                                       ------->TEIL     <---------ARR14(2)                  ------>NtERF2                                        <---------ARR14(2)                <---------ABI4(2)                                      <---------ARR11(1)  <---------                <------NtERF2                             <---------AHL20(2)            <---------ARR11(3)               ------>NtERF2               <-----------ARR10           --------->GLK1(2)<-----------ARR10              <---------ATERF1(2)          --------->GLK1(2)          <---------CCA1(2) --------->ARR11(3)            --------->ZAT2 ------>NtERF2   --------->ARR14(2)         <---------ARR14(1)--------->GLK1(2)            --------->At4g35610            <---------ARR14(2)  --------->ATHB12         --------->ARR14(2)            <---------At4g35610           <---------GLK1(2)  <---------WOX13(1)        <---------ARR14(1) ---ANAC58  <---------ZAT2--------->DEAR3(1)              --------->AHL20(1)  <---------AHL20(1) ---ANAC58  ----------->RAV1(2)       <-------TEIL        --------->AHL20(2)  --------->AHL20(1) <--- --------HVH21--------->ATERF1(2)  <---------ANAC55(2)   --------->AHL20(2)  <---------CCA1(2)   ----   gtcgctggaaactctgctggcaccgtcaccgcctactacgtacagaatctacttgtgaaattaattgatttcgaatcttatatattagagtatcttttca  13130700                                                                             --------->ANAC46                                                                  --------->TOE2(3)                                                                 --------->YAB1           ----------->GT1      <-----------GT1             <---------ZAT2   --------->ANAC58         <---------ATHB12 <---------AHL20(1)                <---------At4g35610        --------->MYB52(1)--------->AHL20(1)                --------->At4g35610        ------>MYB83----------->GT1                         --------->ZAT2   --------->ANAC58 -DOF2  ------>MYB46(1)  --------->ICU4              <-----------RAV1(1)--------->DAG2 ------At4g35610 <---------AHL20(2)   ------>ZmHOX2a(1)     <------NtERF2    --------->bZIP60(2) ----->At4g35610--------->ICU4 <-----------GT1    <-----------RAV1(1) ---------->DOF2       <--------   tctcaaaaccaatcggtaataaatgtaatatttttaactcctaatgttatacatgttgtggcagctatcgtcaaaaggcacggcatgggatgagattgac  13130800  Previous    Next  AGI:  At4g25810.1    Description:  XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6); hydrolase, acting on glycosyl bonds. Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 23 precursor (XTH23) [Arabidopsis Thaliana] (GB:Q38910;GB:Q8W4M6); similar to TCH4 (TOUCH 4), hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] (TAIR:AT5G57560.1); similar to putative xyloglucan endotransglycosylase [Cucumis sativus] (GB:CAD87535.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains Inter Range:  from: 13128652    to: 13129893    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g25820.1    Description:  XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9); hydrolase, acting on glycosyl bonds. Identical to Xyloglucan endotransglucosylase/hydrolase protein 14 precursor (XTH14) [Arabidopsis Thaliana] (GB:Q9ZSU4); similar to xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [Arabidopsis thaliana] (TAIR:AT5G57540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43267.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains In Range:  from: 13130306    to: 13131797    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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