Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------ANAC58             --------->TOE2(3)                                        --------->ANAC58     ------>ZmHOX2a(1)         <---------ICU4               <---------HSFB2a(1)             --------->ANAC58---------->ARF1        <---------YAB1              ----------->RAV1(1)             ---------->DOF2   ---------->ID1      <---------ICU4       <-------TEIL                 ----------->RAV1(1)       <---------ANAC58      --------->YAB1      --------->CCA1(2)     <---------YAB1--------->YAB1  <------ZmHOX2a(1)   ---   ctggctcatcatcatcgtcaaactcaagattcagagggcaacattcgattttgtttggcaacaatgaacacaaagcaataggagccttgtctcctattga  12962300                                            <---------ANAC58                                            <---------ANAC58                                            <---------ANAC46                                       <---------ZAT6           <-------TEIL   --------->CCA1(2)                                 --------->SPL7    <---------ICU4             <---------ARR11(3)  ---                              --------->ANAC46     --------->YAB1             --------->ARR11(3) <---                  <----------DOF2------->TEIL      --------->ATHB12   --------->TOE2(3)         <---- ------>ZAT6 <----------DOF2  <---------ANAC55(2)<---------WOX13(1) <-------TEIL        --------->YAB1   acactgaatcacactcttttctttgctcaaacccgtacctagagttgcctgaatgatggcaaaacatacatacatcaatagatatatcaaacatattcag  12962400                                                                                 --------->GLK1(2)                                                                                 ------->TEIL                                                                                <---------CCA1(2)                                                                             ------->MYC3                                                                             <-------MYC3                                                                            --------->TGA1a                                                                            <---------O2                                                                            --------->O2                                                                            <---------TGA1a                                                                            --------->ANAC55(2)                                           <---------ZAT2                   <---------ANAC46                                           --------->At4g35610          <-----------HVH21             --------->ZAT14               <---------At4g35610      --------->TOE1(2)             <---------ZAT14    <---------ARR14(2)                  <---------LBD16     <---------ANAC58 ------>GLK1(2)                 --------->ARR14(2)           --------->ZAT14----------->GT1 ------GLK1(2)                 <---------CCA1(2) <---------TOE1(2) ----------->RAV1(2)  <---------ANAC58 -----At4g35610       <-----------GT1      --------->ZAT2    <---------ZAT14<---------ANAC55(2)   attccaaaactagactacacaaatatacaattcatatcccaaatcagctcgaaggaacaagagtatagtacctgggtcacgtgaatctttccttgttcat  12962500                                                                                        --------->LBD16                                                                                        --------->HSFB2a(2)                                                                                        <---------HSFB2a(2)                                                                                       <---------LBD16                                                                                       <---------ANAC46                         <---------TOE2(2)                                            <---------LBD16                         <---------TOE1(2)                                     <---------ATHB12                         --------->LBD16                                --------->TOE1(2)                   <---------ANAC58                                     --------->TOE2(2)--------->LBD16                   <---------ANAC58                     ----------->RAV1(1) <------ZmHOX2a(1)      --------->YAB1    <-----------RAV1(2)------>ZmHOX2a(1)      --------->YAB1--------->YAB1   ----   tttttggattataagcttgaggcttcccaggtttcacttcaagtcctgcatatgttaacaacacaaaatcagaacctaggaatcatgctccgggaaaatc  12962600                        -------->P            --------->ZAT2                     <---------MYB52(2)       --------->At4g35610           --------->ZAT14      --------->GLK1(1)           <---------ZAT14      <---------ARR14(2)           <---------ZAT2  <---------LBD16    <---------At4g35610           <---------At4g35610  --------->GLK1(2)                             <----------DOF2           --------->At4g35610  --------->ARR14(2)<------MYB83           <------NtERF2           --------->ZAT2 ------->GAMYB       <---------ZAT2            --------->RAP2.6(2)        -- ------>DOF2 ----------->GT1   <---------GLK1(2)  <------MYB46(1)     --------->At4g35610          --   aaagaaaacactgagcagagaaaactaaccccagaatcccattttctcagctaggttactccttggaatcgaagcggcaactttgtttctacagactaaa  12962700                                                               ------------>CBF                                                         --------->HSFB2a(1)                                                         <---------HSFC1(2)                                                         <---------HSFB2a(1)                                                    --------->HSFC1(1)         *TSS  <-----------GT1                      --------->HSFB2a(2)           <----------DOF2         --------->HSFB2a(1)                        <---------HSFC1(1)          <---------ZAT18        <---------TOE1(2)                           <---------HSFB2a(2)       <---------ZAT18        <---------TOE1(3)                          <---------ANAC46           --------->ZAT18        <---------TOE2(2)  <----------DOF2      <---------ARR14(2)           ------->GAMYB ------->TOE2(3) <---------At4g35610            --------->ARR14(2)           --------->DEAR3(1) ------->TOE1(3) --------->At4g35610     ---------->DOF2 --------->HSFC1(2) --------->MYB46(3)    ---   accctaatcgaaggtttttagcagacgagctttatatcgagattaaagcggtttcgagaaatttcgacaatttgtgcaaccgcgctctcagtttgggcct  12962800                                                                                            <--------                                                                         ----------->GT1    <--------                                                 <---------ARR11(3)     --------->DAG2      ---------                             ---------->DOF2     --------->ARR11(3)    ---------->DOF2      <--------                            <---------ATHB12    <---------CCA1(2)   --------->YAB1          --------- ------->GAMYB    ---------->DOF2       ---------->DOF2             ----------->GT1       ----------- ------>MYB52(1) <---------ATHB12      <---------ATHB12      --------->YAB1--------->AHL20(2)--------   taacagactttgaaattcaatgaagccccaatgaagccccaatgaagcccatatattggtctgtcataaatcgtaaagtaaatggtattgtcaagatact  12962900 -GLK1(2)                       <---------YAB1             --------->ARR11(3) -ARR14(2)                    <---------ICU4               <---------ARR11(3) >ARR14(2)                   <---------YAB1      ----------->GT1 -ARR11(3)                   --------->ICU4 <---------AHL20(2)   --------->YAB1 >ARR11(3)      <---------AHL20(2)       <---------ZAT6    --------->GLK1(2)       --------->ANAC58 >ARR10         --------->AHL20(2)       ----------->GT1  --------->RVE1(1)        --------->ANAC58 ->ARR14(1)    --------->AHL20(2)  <-----------GT1      --------->AHL20(2)         --------->ANAC46   cttcatatttgataacatttaatttgtgttcattattttactagagttaatttgaaaaaaaaatctataattttctctcatgtaaacgcaaattcagaaa  12963000                                                                                  --------->MYB52(2)                                                                              <---------ANAC58                                                                              =======================                                                                              <---------ANAC55(1)                                                                              --------->ANAC55(2)                                                                              <---------ANAC55(2)                                                                              <---------O2                                                                              <---------ANAC46                                                                              --------->O2                                                                              <---------bZIP60(1)                                                                              <---------TGA1a                                                                              --------->TGA1a                                                                              --------->bZIP60(1)                                                                              <---------bZIP60(2)                                                                              <---------ANAC58 <-----                           ------>MYB46(1)                                   ----------->STF1  <-----                           ------>MYB83                              <---------ZAT14    <---------CCA1(2)          --------->AHL20(2)                                         --------->ZAT14 --------->GLK1(2)     --------->AHL20(2)  <---------MYB59                  <---------MYB59  ----------->TGA1 <--------   ttttgttttaaataaaacaatatgagacctatctttcaacaaaacaatacaatattgagacctaaacacactgtacaatgacgtgagtttctatctttct  12963100                                                                     ------->TEIL                 --------->ZAT18                            <---------ANAC46    --------->ARR14(2)                                      <---------ANAC55(1)    --------->GLK1(2)---------->DOF2                        <---------ANAC55(2)                 -----    <---------ARR11(3)                                      --------->ANAC55(2)     <---------MYB52(2) ==bZIP_DOF      --------->ZAT14                       --------->MYB59             --------->ANAC46 ----ANAC58      <---------ZAT14    <-----------RAV1(1)--------->MYB52(2)          --------->ANAC58 ----ANAC58      <---------ZAT18<----------DOF2        --------->MYB46(2)          --------->ANAC58 --DOF2        <---------------AtSPL8         <-----------GT1       <---------CCA1(2)           <----   tgtcaaaatctgaagtaagtgtacaaagtaatgtctttttgttgtatgtaaccaagttagttaagtgtttgtatctcttgttaccaaggaacgaagagat  12963200  Previous    Next  AGI:  At4g25340.1    Description:  immunophilin-related / FKBP-type peptidyl-prolyl cis-trans isomerase-related. similar to immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative [Arabidopsis thaliana] (TAIR:AT5G05420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63568.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, FKBP-type; (InterPro:IPR001179) Range:  from: 12959452    to: 12962709    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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