Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------GLK1(2)                                <---------At4g35610                              <---------HSFB2a(2)                              <-----------RAV1(2)                          <XXXXXXXXXXXXXXXXXXXXMIR395A/D/E                          <XXXXXXXXXXXXXXXXXXXXMIR395B/C/F                         ------>MYB46(1)                         ------>MYB83                                                               <                      <---------At4g35610                                                           <                      --------->At4g35610                                                           -               --------->LBD16--------->HSFB2a(2)                                                 ---               --------->At4g35610                                  <---------ETT(2)              <--               <---------At4g35610                                  --------->ETT(2)      --------->HSFB2a(2)             <---------LBD16------>ZmHOX2a(1)                     <-----------HVH21       <---------HSFB2a(2)   ---------->DOF2<-----------HVH21               <---------At4g35610                   ------>ZmHOX2a(1)   gaaccaaaagtcttctccgctgtcaccttcctccagatgcttcagttccttcagcgaattgctcaacctgtcaacagtgtctcccatctcctctagacag  12936300                                                                                                   --                                                                                                   <-                ------>NtERF2                                                                   -----             --------->At4g35610                                                                -----           <-------PIF5                                                     <---------ANAC58  -------           ------->PIF5              --------->YAB1                     <----------DOF2       ======= ------NtERF2--------->ZAT2       --------->YAB1                    ----------->HVH21       ========= ---------At4g35610      <---------YAB1  --------->WOX13(1)       --------->At4g35610     --------->RAP2.6(3) -------->At4g35610  <----------DOF2<---------YAB1        <---------TOE2(2) <---------ANAC58------->GAMYB ------>ZAT18<---------At4g35610<----------DOF2       <-------TEIL<---------At4g35610    --------->MYB52(1) -------ZAT18<---------ZAT2    --------->TOE2(3)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------DOF5.7(2)   tccgctacagcctcgtgctgcctctttgtgattcctttataatcagtcatctctgatacataggttttggctgactttgctcgggctatgctaacggcaa  12936400                 <---------bZIP60(2)                 <---------O2                 --------->TGA1a                 --------->ANAC55(2)                 --------->O2                 <---------ANAC58                 <---------ANAC55(1)           --------->ANAC58                                                       <---------bZIP60(1)        --------->ZAT2  <---------At4g35610                                       <---------O2        --------->At4g35610                                                    ----------->HVH21  <-----------HVH21   <---------RAP2.6(2)                                     --------->SPL7 ------->ZAT18   <---------ANAC55(2)                                        <---------SPL7 --------ZAT18   <---------ANAC46                               <---------HSFB2a(1) ---->ANAC58     <---------TGA1a<---------ARR11(3)              --------->HSFB2a(1)<-----------HVH21 ---->ANAC58     <---------ANAC58     <---------ANAC58          --------->HSFC1(2)--------->bZIP60(1) --->DOF2  --------->ANAC58     --------->ARR11(3)              <---------HSFC1(2)--------->O2 ==========================bZIP_DOF   <---------ANAC58         --------->ANAC58<---------TOE1(1) ==========================MYC_MYB------>ZmHOX2a(2)            --------->ANAC58<---------TOE2(1)    <   gcgcggtctcagcaagcttacgtggctgcttcttgatctcgcttgcatatgaagacagagactggaagcatcggtctgggtacgacgtcgtctcacaaga  12936500                                                                          <-------TEIL                                                                         --------->CCA1(2)                                                                        <---------ARR14(2)                                                                  <---------ZAT14                                                                  --------->ZAT14                                                               <---------ANAC46                                                             --------->ZAT14                                                     <---------YAB1     --------->ARR14(2)     ------                               ------>ZmHOX2a(1)  --------->ICU4<---------At4g35610        ----------        ------->TEIL<---------ALFIN1 <---------TOE1(3)       <---------ZAT14            --------->GLK1(2) ----------DOF2  <-----------GT1     <---------TOE2(3)   <-----------RAV1(1)     ---------->DOF2   ggctttaatgaactctgtatcaccacttgattcctcttcaaggtttctagccatgactattgctgcagtggacagatacagaacaaagagaatcaaagaa  12936600     <---------HSFC1(2)     <---------HSFB2a(1)     --------->HSFC1(2)     --------->HSFB2a(1) --------->ANAC58                                                                      --------->LBD16 --------->ANAC58                                   <-----------GT1                   <-----------RAV1(2) ---->DOF2                                 <---------YAB1           *TSS       --------->MYB52(1) >DOF2                                ----------->GT1 --------->MYB46(3)--------->At4g35610 <--------   agctcgaaatttctagccattttagatttaaaacacaaatgggttattttagtttaacaactacaaatgagagtagcagaataagggtccagggttttat  12936700                                            --------->ARR11(3)                                            <---------ARR11(3)                                        ------>ZmHOX2a(1)                                       --------->TOE1(3)                                       --------->TOE2(3)              ------->TEIL            =====================================HOX2a_HOX2a           <---------YAB1             ------>ZmHOX2a(2)         <---------ICU4         <------------CBF         --------->DAG2                       -------         --------->YAB1       <-------TEIL <---------CCA1(2)        ------>ZmHOX2a(1)         <------      --------->YAB1         --------->CCA1(2)          ---------->DOF2                      --------  ---------->DOF2           <---------ARR14(2)       --------->ANAC46                        -------- ---TBP --------->ICU4      --------->ARR14(2)<---------ICU4        <----------DOF2       -----------   agagaaaagaataatgaatgtgtgaatgcagatacattgatccttaaatctttacacaaaaagcactatcctttttttagagcaaaaatgggagttagtt  12936800                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                -----                                                                                               <-----                                                                                            <--------                                                                                      ------>ZmHOX2a(2)                                                                                     <------ZmHOX2a(2)       --------->AHL20(2)                                                           --------->ARR14(2)  --------->TOE2(3)                                                                 <---------ARR14(2) -->At4g35610                                      --------->At5g28300      <---------ARR11(3) ------ -GAMYB<---------ATHB12                           ----------->GT1        ----------->RAV1(1)========= ->MYB52(2)          ----------->GT1            --------->At4g35610     --------->REM1(1)<---------TOE1(2) ->MYB46(2)   --------->At4g35610        <------ZmHOX2a(1)          --------->At4g35610 ------>ZmHOX2a(1) ->MYB.PH3(2)--------->ALFIN1     --------->MYB52(1)           --------->YAB1 <---------ARR14(2)<----   gaaacatcaataaatgtgctgcaatgtgaataccaataacagaggataagagctgtaactatttgtcatcatctacaacatatttggatcctagctttct  12936900                          ------->MYC3                          <-------MYC3                          <-------MYC2                          <-------MYC4                          ------->PIF4                          ------->MYC2                          <-------PIF5                          ------->PIF5                          ------->MYC4                          <-------PIF4                         <---------ANAC55(2)                         <---------TGA1a                         --------->TGA1a                         <---------O2                         --------->O2              --------->TCP15(1)              <---------PCF2             <------MYB46(1)             <------MYB83--------->bZIP60(2)            <---------MYB46(3)            --------->MYB55(2)           --------->ALFIN1           <---------ANAC46         <---------MYB46(3)----------->HVH21        <---------AtMYB61--------->ANAC46 ------->ARR11(3)        --------->ANAC58 --------ARR11(3)        --------->ANAC58 --------AHL20(1)        --------->ANAC55(2)   <-------MYC3 ------->AHL20(1)      <------------OsbHLH66   ------->MYC3 ---------->AGL15  ================bZIP_DOF   <---------O2                           <---------ANAC58 ------------AGL2  ---------->DOF2<---------ATHB12                                   <---------ANAC58 --DOF2 --------->ALFIN1------->TEIL          --------->O2                     <------ZmHOX2a(1) ----------->AGL3  =====================================bZIP_DOF           <---------O2 ==================================bZIP_DOF   --------->TGA1a              --------->O2 -----------AGL15 ------>ZmHOX2a(1)           <---------TGA1a          <-----------HVH21      -------   atatattgaagtggtgggtcctaatgcacgtgaccaatgactaaacccatgtgtctaaaccatatgaaacactggtcacgaggaatagcttatcaattga  12937000                   --------->GLK1(2)             ----------->GT1           ---------->DOF2        >>>>>>>>>>E2Fc        >>>>>>>>>>E2Fe        >>>>>>>>>>E2Fa        >>>>>>>>>>E2Fd                                                        ---------->DOF2       -       --------->LBD16                                                  --------->GLK1(2)           <      <---------ANAC46                                                  <---------ARR14(2)        ---     <---------LBD16         <<<<<<<<<<<<<<<<<LFY                       --------->ARR14(2)      -----     <---------At4g35610    --------->bZIP60(1)                        <---------GLK1(2)       ------     --------->At4g35610 <---------ZAT6             ---------->DOF2--------->O2     <---------RAP2.6(3) -->AHL20(2)--------->DAG2  <---------bZIP60(1)  --------->TOE2(3) --------->ANAC46--------->RAP2.6(2)   ataatgcagcgggaaaagtagaatctagtgatgacattggtttaagtcaattcttaaagaagacatcccacgagaatctacaaagccgaaatcactccta  12937100          --------->YAB1         <---------ATHB12             <----------DOF2        ------>MYB83                 ------>ZmHOX2a(2)        ------>MYB46(1)            --------->ARR11(3)       --------->WOX13(1)       ------->MYC3     --------->MYB46(3)         <-------MYC3   --------->MYB52(1)     --------->ANAC55(1) <---------MYB52(2)       --------->ANAC46 -------->At4g35610       --------->ANAC58 ---------At4g35610       --------->ANAC58                                                          - ------>MYB46(3)        --------->ANAC46                           <---------ANAC46               <-- ---->MYB52(1)          <---------ALFIN1            --------->MYB46(3)------->TEIL           <------- >ZmHOX2a(1)      <-----------HVH21<---------ARR11(3) --------->MYB52(1)          <-------TEIL    <--   acagctaaccaatcagacgcgttcacacacggcatgtgatctttttctctatgaacaaacaggtctcttgtgtatgtgtgtaagttcataactcaacatg  12937200  Previous    Next  AGI:  At4g25260.1    Description:  invertase/pectin methylesterase inhibitor family protein. similar to invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22) [Arabidopsis thaliana] (TAIR:AT5G62350.1); similar to putative ripening-related protein [Vitis vinifera] (GB:CAB85625.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 12935720    to: 12936668    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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