Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->YAB1                                                                             <---------YAB1                                                                            --------->AHL20(2)                                                                            --------->AHL20(1)                                                                          --------->ARR11(3)                                                                          --------->ICU4                                                                          <---------AHL20(1)                                                 <-----------RAV1(1)      --------->AHL20(1)                                          <-----------GT1            ----------->GT1                   --------->AHL20(2) ------->TEIL               ----------->GT1<---------YAB1           ---------->DOF2         ----------->GT1     ----------->GT1    <---------ARR11(3)   aaactattgctcttaaagaaaaaaaatgtttactgagatgtatataacattttgttgttgttaaaaatggttagaaaatattataactagagtttttggt  12923700                                   <---------AHL20(2)                                   --------->AHL20(2)                                   --------->AHL20(1)                               --------->AHL20(1)                               <---------AHL20(2)                               <---------AHL20(1)                               --------->AHL20(2)                              --------->AHL20(2)                              <---------AHL20(2)                           <---------AHL20(2)        <---------RVE1(1)                          <---------AHL20(2)        --------->ARR11(3)                          --------->AHL20(2)        <---------ARR11(3)                      --------->AHL20(2)            <---------GLK1(2)        ----------->GT1  --------->AtMYB61  <---------ATHB12    <---------TOE2(3)           <-------TEIL      --------->ANAC46   ttcaccaaaaccatatataacaaatgaattaaataaattttttgatgttatatagattttttcagtaggcatacatatgttgaaaataaactcaacaaaa  12923800                                                                           --------->GLK1(1)                                                                          <---------ARR11(3)         <---------WRKY18(1)                                              <---------ARR14(2)        --------->WRKY12             --------->YAB1                       --------->ARR11(3)        --------->WRKY38(1)      <---------AHL20(2)            <------ZmHOX2a(1)                 <---        --------->WRKY45         --------->AHL20(2)          --------->LBD16                     <---     --------->ALFIN1           --------->AHL20(2)          <---------HSFB2a(2)           <----------DOF2    ------->MYC3             <---------YAB1                 --------->HSFB2a(2)      <-----------GT1    <-------MYC3          <-----------GT1---------->DOF2    <---------LBD16--------->CCA1(2)  <------   aaaacatgtgttgaccgtatcagtttattttctaattaataagaaaagtattctattgttttccaggaaggaagaagatatcgaattttgctctttctac  12923900                                                                            --------->DREB2C(2)                                                                            ------->GAMYB                                                                            --------->At1g77200                                                                            ----------->HVH21      <-                                                                           --------->DEAR3(2)      <-                                                                           --------->MYB46(3)  <-----                                                                           <---------MYB55(2)  ------                                                        <----------DOF2   ------>MYB46(1)    --------                                                  --------->ANAC46        -------->P --------->ANAC58                                                  --------->ANAC58        ------>MYB83--------->HSFC1(2)                                                  --------->ANAC58       --------->MYB52(1)--------->HSFB2a(2)                                             ----------->HVH21          --------->MYB46(3) <---------LBD16   <---------GLK1(2)                        <-----------HVH21           <---------ALFIN1  <---------ANAC46 ------DAG2                ---------->DOF2  --------->At5g28300       --------->ANAC46<---------HSFC1(2) -------DOF2          <------ZmHOX2a(1)    ----------->GT1      <---------GLK1(2)    --------->ANAC58 -----GT1            ----------->GT1      <---------DEAR3(1) --------->ANAC46----------->RAV1(1)  <--   ttttcgattctctctcgatcgagaggagaaaaagacagagaggcacggtgacacgctgctttcacagaatttccccaaccgacagacaagcttcgcggat  12924000                                                <---------ANAC58           --------->ATHB12                     <---------ANAC46     *TSS --------TOE1(3)                                <---------ANAC58    <---------ZAT2 --------TOE2(3)                          <---------AHL20(2)      ------>ZmHOX2a(1) ----ARR14(2)                   <---------GLK1(1)       <---------ARR11(3)                        <-- --->ARR14(2)                  <---------ARR11(3)       <-----------ARR10<----------DOF2          --- ->LBD16  <---------YAB1       --------->ARR11(3)       --------->ARR11(3)                      <---- ---------RAV1(2) <------ZmHOX2a(2)       --------->AHL20(2)   ------>ZmHOX2a(1)    <-----------GT1   tcaggtttttctatgattcgatccatttcttaagaactctgcattttattccttgtaaaatcttcctcctagctcctttcttcaattttcgatttttgat  12924100                                  <---------ANAC58                                  <---------ANAC58                         <----------DOF2                      <---------ARR11(1)                 <---------------AtSPL3                      --------->ARR11(3)         ----------------------->TaNAC69(2)          <-------                      <---------ARR11(3)         <----------DOF2                             -------- -------AHL20(2)     <---------CCA1(2)   --------->ARR14(2)                       <---------ANAC58 ------>AHL20(2)   --------->YAB1 <---------ANAC46       --------------->AtSPL8   <---------ANAC58 -----WOX13(1)    <------ZmHOX2a(2)      <---------ARR14(2)     <---------------AGL15        --------   ttatattgtttcaattttggatcatatctttttatttcttgtgaatcgggtctttgtacttggtacctctatgtagcatttttggcttctgtacaaatct  12924200    ----------->RAV1(2)    --------->At4g35610                                                                             <    <---------At4g35610     ---------->DOF2               <----------DOF2    <-----------GT1        -  <-----------GT1        --------->TOE2(3)           ------>ZmHOX2a(1)     <----------DOF2          < --ARR14(2)              >>>>>>>>>RAP2.2             <---------At4g35610<-----------GT1            <- ->ARR14(2)     --------->ANAC46               <---------GLK1(1)--------->At4g35610             ----- ->GLK1(2)     --------->SPL7                 <---------GLK1(2) <---------At4g35610        --------->AHL20(2)   gatttcacctgtatgcatacgactcaatctaaaagaacccaagttttggattttcctctgctttggagctcaattttctttacattctgaaaaaaaaatc  12924300                                                                                                <----                                                                                        <---------YAB1                                                                                     <------NtERF2                                                                                    <-----------HVH21                                                                                    <---------RAP2.6(3)                                                                                    <-----------TGA1                                                                                   --------->TGA2(1)                                                                                   <---------bZIP60(1)                                                                                   <---------TGA2(1)                                                                                   <---------ANAC58      <---------TOE2(3)                                          <------ZmHOX2a(2) --------->bZIP60(1) ---------------AGL15                                           --------->ARR11(3) <---------ANAC58 -------------->AGL15                         <---------ZAT6    <---------ARR11(3) <---------ANAC46 ----------DOF2                <---------ANAC46           <---------YAB1      <---------At4g35610 ----------------AGL3      --------------------->WRI1  --------->ICU4         --------->At4g35610 ---->YAB1         <---------DAG2      <---------SPL7<---------ICU4     <----------DOF2 --------->AtLEC2   atctttttatggaaatgttcaatttttgtagttgtttgtatcgtccgagtcttaatacttatgagagatcatgtctttgcagatggcgtcatgctaatat  12924400                                                                  <---------ANAC58                                                                  <---------ANAC58                                                             <---------------AtSPL8                                                             --------->DAG2                         <                     <---------TOE2(3)                       --------------->AtSPL3               <--             --------->LBD16                      ------>ZmHOX2a(1)                        --------->At4g35610         --------->GLK1(2)                       --------------->AGL15                     <---------At4g35610         <---------ARR14(2)                      <---------------AGL15         --------->LBD16    ---        <---------GLK1(2)                       ----------------->AG     <---------ATERF1(1)      ---      ----------->ARR10                         ----------------->AGL1  --------->ANAC46 --------->MYB46(3) -----YAB1   <---------LBD16           --------->At5g28300  ---------->DOF2   --------->ANAC46    <--   gactaaatgagattctggggattaagtttaagtgggaaggctgtaatagttcctaatggggataaagtacttgcccgtctccgtagcatcaacagctctc  12924500  <-----------RAV1(1)                                        <---------WOX13(1) ----------DOF2                                            --------->ATHB12 -------At4g35610                                  --------->At4g35610 ------>ZAT2                                    <---------At4g35610                   --------->GLK1(2) ------>At4g35610                             <---------HSFB2a(2)                 <------ZmHOX2a(1) -------ZAT2                                  --------->HSFB2a(2)            <----------DOF2        <   agctttgttggacttcaagtctggacagagttgtctctcgatagacttcgagcagatgggctgattgccaagaacatttctttaggagactctgagcatg  12924600  Previous    Next  AGI:  At4g25230.1    Description:  RIN2 (RPM1 INTERACTING PROTEIN 2); protein binding / zinc ion binding. similar to RIN3 (RPM1 INTERACTING PROTEIN 3), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G51450.1); similar to ERAD RING E3 [synthetic construct] (GB:ABG85250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42690.1); contains InterPro domain Ubiquitin system component Cue (InterPro:IPR003892); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 12924069    to: 12929166    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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