Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------YAB1                                          <---------AHL20(1)                                          --------->AHL20(1)                                          <---------AHL20(2)                                         <---------AHL20(2)                                         --------->YAB1                                         --------->AHL20(2)                                        --------->ICU4                                      --------->YAB1                                    --------->At5g28300 ----------->GT1               ------->GAMYB                                                        - -------->ANAC58              --------->MYB46(3)                                              ------- -------->ANAC58             --------->At4g35610                                             -------- ------->DOF2  <-----------HVH21   ----------->GT1         --------->At4g35610              --------- ->DOF2     --------->ZAT14 --------->MYB52(1)             <---------At4g35610             ----------   gaaagctaaaactctccagtcagtgggaatcaacagacagtaattatatttgaactcacatagctgaatgttgaatatcaactcatcaaaccgaaaaggc  12906900                                                   <---------------AGL15        --------->ANAC55(2)                        --------------->AGL15    --------->YAB1                             <---------GLK1(2)    <---------ICU4                             --------->ARR11(3)   <---------YAB1                              <---------ARR11(3)   --------->ICU4                              <---------ARR14(2) --------->YAB1              <---------TOE2(2) --------->ARR14(2) -------->AHL20(2)  <-----------ARR10    --------->YAB1     <---------ANAC58 ---->GT1          <---------GLK1(2)     <---------ICU4     <---------ANAC58 ->DAG2 <---------ANAC55(2)------->GAMYB<------ZmHOX2a(2)   <---------ANAC46 ->DOF2<---------ICU4   --------->MYB52(1)   ----------->ARR10   ---------->DOF2 >DOF2--------->ICU4--------->GLK1(2)   <---------ATHB12   <-----------------------TaNAC69(2)      --   aaataataataagtattgacagaatctaacggaggtataccgatcatgagatactcttaatagcgttgaaagtcaaatgtctcagagtctaatttggacg  12907000                                  <---------------------WRI1                       --------->ANAC58                  --------->MYB46(3)             --------->ANAC58   --------->AtMYB61             --------->ANAC58  --------->MYB46(3)            --------->DAG2   ------->GAMYB           ---------->DOF2  --------->MYB46(3)         <---------GLK1(2)        ----------->GT1--------->ANAC46           <---------STY1(2)        ------>ZmHOX2a(2) --------->MYB52(1)      --------->STY1(2)                             <----     <------ZmHOX2a(1) --------->ANAC58   --------->MYB52(1)     ----------->GT1               ------ ---------->DOF2  --------->REM1(1)    --------->At4g35610     ---------->DOF2                 ------ ------->AtMYB61----------->RAV1(1)    <---------At4g35610 <---------YAB1                     <------   accaaaaggatcgtaaagcaacaacactcaacgaccatcgaagctaacaaatagctagcttcttataaagataaaaaaaaaaactcaaactttccaataa  12907100       <----------DOF2                       <---------YAB1             <---------PCF5 -----AHL20(2)                          ----------->GT1            ---------->DOF2                  - --->YAB1                              --------->DAG2             --------->YAB1                    - --->AHL20(2)                   --------->ARR14(2)               <---------ATHB12          ---------- ---ATHB12                      <---------ARR14(2)             --------->WOX13(1)          <---------ZAT6   aaatgtcaactttgagcacaatgcaattgcagagaattcgaaaggttatgaaacattgatcaagtcaatcaaagggaccatcttcagggcatagagttaa  12907200                         ----------->GT1                      ----------->RAV1(2)                     ------>MYB46(1)                     -------->P --------->MYB52(1)                     ------>MYB83   <------ZmHOX2a(1)                     --------->MYB52(1)                                                 <---------HSFC1(2)                    --------->MYB55(1)                                                  <---------HSFB2a(1)                   <---------MYB111(1)                                                  --------->At4g35610 -------->ANAC58   <---------MYB46(2)       <----------DOF2      --------->DAG2         --------->HSFB2a(1) -------->ANAC58   <---------MYB59<---------TOE2(3)   --------->ANAC58                  --------->HSFC1(2) ->GT1           ------->TEIL   ---------->DOF2       --------->ANAC58                  <---------At4g35610   acaagaaaaccagaaattgaacctacctggtaaataaaggatgcgactttagtcaaacccaatacaaaaattgagagaagaaatggtggaagcttccatt  12907300                                                                   <---------At4g35610                                                                <---------At4g35610                                                             <------MYB83                                                             <------MYB46(1)                                                            <---------AtMYB61                                                *TSS        <---------DEAR3(1)                                    --------->At4g35610   <-------MYC3                                 --------->At4g35610      ------->MYC3              ------------>CBF                                 <---------At4g35610     --------->O2              <<<<<<<<<<<<<<<<<LFY                                ----------->RAV1(1)      <---------O2              --------->ANAC46        <---------ATHB12      <---------At4g35610        <---------TGA1a        <-------TEIL   <-----       --------->ANAC58---------->DOF2  >>>>>>>>>TBF1    --------->TGA1a       --------->CCA1(2)       --------->ANAC58============================================bZIP_DOF   <---------ARR14(2)      --------->WOX13(1)      --------->At4g35610      <---------ALFIN1       --------->ARR14(2)   <-   tcacagagcaatcaatttcagaaaataaagagagcagcagaagaagaagatgaagacccacgttggtgctgctaatctcagatacaaacaatgggttctt  12907400                                                                                        <------ZmHOX2a(2)                                                                                        =============                                                                                       <---------ARR14(2)                                                                                       --------->ARR14(2)                                                                                      <------ZmHOX2a(1)                    --------->CCA1(2)                                          ---------->DOF2                   <---------ARR11(3)        --------->YAB1                   <---------WRKY12      -        --------->GLK1(2)                 --------->YAB1       <------MYB46(1)<---------WRKY45 ------       <---------GLK1(2) ---------->DOF2--------->AHL20(2)     <------MYB83   <---------WRKY38(1)   - ----YAB1          --------->ARR11(1)   --------->AHL20(1)   <--------P      --------->WRKY18(1)<---- ----------GT1 ---------->DOF2         --------->YAB1 <----------ID1        <-----------HVH21 <------   ataaccagagaatctaaaaaagatttgaaaagaagcatcaaaaataataagaaaatgagacaagttggtcatgttaatggtcaaaggaggatcagtcctg  12907500        <----------DOF2   <-----------GT1  --------->ARR14(2)  <---------ARR14(2) <----------TaMYB80 =HOX2a_HOX2a                                                                             --------->TOE1(3) ---------->ARR10                      <---------YAB1                                     --------->TOE2(3) >ZmHOX2a(1)                         <---------ICU4                 ---------->DOF2<-----------GT1 --------->TaMYB80                  --------->ICU4                <---------HSFB2a(2)   ------>MYB83< -----TOE1(2)                <-----------GT1 ----------->HVH21    --------->HSFB2a(2)   -------->P -- ---LBD16            ----------->RAV1(2)--------->YAB1<------ZmHOX2a(1) ---------->DOF2 ------>MYB46(1)   ggtatatactcttttgttctctcgcctgaattttcttcattatcagagtgacagaaggagagtgtgttctaaaagaaagaagttttctccaaccttaggc  12907600                                                                              <---------AHL20(2)                                                                             --------->YAB1                                                                            <---------YAB1                                                                           --------->AHL20(2)                                                     <-----------GT1      --------->YAB1                                                    --------->AHL20(2)    --------->ATHB51                                                    <---------AHL20(2)    <---------ICU4                                              <------MYB46(1)             <--------HAHB4                                              <------MYB83               <---------YAB1                                             --------->MYB59             --------->ICU4               <---------ICU4            <---------ICU4              ------->GAMYB               --------->YAB1            --------->AHL20(2)         --------->ANAC58              <---------YAB1             --------->ATHB51           --------->ANAC58              <---------ATHB12           <---------AHL20(2)         --------->ANAC46 ---------WRKY18(1)                      --------->ATHB12       ------>ZmHOX2a(1) ------->WRKY38(1)                      --------->ICU4         --------->TOE2(3)   cttgactattagtttaatcatagtttatctcttaattccctaattatttggtatttaactacattcctcaacgccattattatatcgagtttggccatag  12907700                        --------->ANAC58                        <---------ANAC55(2)                        ===============bZIP_DOF                        --------->ANAC55(2)                        --------->ANAC58                        --------->O2                        <---------O2                        ===============bZIP_DOF                        --------->TGA1a           ----------------------->TaNAC69(2)               <---------ZAT6          ==================HOX2a_HOX2a                     <---------------AtSPL8          ------>ZmHOX2a(2)                               <---------ANAC46          ====================================HOX2a_HOX2a <---------ANAC58                -----------        --------->ARR11(3)        ---------->ID1        --------->ZAT14                  --------->REM1(1)        <---------ARR11(3)  <----------DOF2 <---------DAG2<---------ANAC58              ------>MYB46(1)  --------->ANAC46      <---------TGA1a     <----------DOF2 --------->ALFIN1            -------->P  --------->ANAC58    <---------ALFIN1 ------>ZmHOX2a(1)<---------ZAT14        <---------ZAT6   <----  --------->ANAC58   ------>ZmHOX2a(1)<---------ALFIN1  --------->ZAT18<----------DOF2  ------>MYB83   ttgcacgcatgatctatgtcttcctcacgtctttttgtctcctcccctttatgcatagtggagtggtacaagactttggtagagttcacctacaacattg  12907800  Previous    Next  AGI:  At4g25160.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G61550.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G51270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60843.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78862.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro dom Range:  from: 12903201    to: 12907348    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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