Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->ZAT14        ------>MYB83                          <---------ZAT18        ------>MYB46(1)                                   --                          --------->ZAT18        -------->P                              --------->At4g35610                          <---------ZAT14       <---------ALFIN1                     --------->At4g35610             <---------CCA1(2)                  ------>MYB46(1)          <---------GLK1(1)     <-----           --------->ANAC46                     ------>MYB83             --------->GLK1(1)     ------           --------->TOE2(1)                  --------->MYB46(3)       <------ZmHOX2a(1) <---------ZAT2           --------->TOE1(1)                 --------->ANAC58        --------->ANAC46<---------At4g35610          ------>ZmHOX2a(1)  --------->ANAC46--------->ANAC46    --------->ANAC58   --------->ANAC58 ---------ZAT14      <---------ARR14(2)      --------->ANAC58    --------->ANAC58   --------->ANAC58 -------->ZAT14  <---------LBD16 ------>NtERF2<---------MYB59<-----------HVH21    <--------P <-------   agtacagacatcctcgtaactcggattgtgcacgatgccatggctatacccaacctcggtcttggtcacaccaggaactctctggtaagctagctccact  12899700                       <---------ANAC46                                        <---------ANAC46               <------NtERF2                                                  ------>NtERF2             --------->RRTF1(2)                                               <------NtERF2             --------->RAP2.3(3)                                              <---------LBD16             --------->RAP2.3(2)                                            <---------RRTF1(2)             --------->RRTF1(3)                                             <---------RAP2.6(2)             --------->DEAR3(1)                                             <---------RAP2.3(3)            --------->RAP2.3(1)                                             <---------RAP2.3(2)            --------->ERF1                                                  <---------ANAC58            --------->RRTF1(1)                                              <---------RRTF1(3)            --------->ATERF1(1)                                             <---------DEAR3(1)          --------->DEAR3(1)                --------->ANAC58                <---------ANAC46 --------          ------->GAMYB<---------ANAC58     --------->ANAC58                <---------ANAC58 --------         --------->DEAR3(2)                 --------->ANAC46            <-------GAMYB        <-------        --------->MYB52(1)          --------->At4g35610                <---------MYB46(3)    <-------        -------->P     <---------ANAC58     --------->ANAC55(1)       <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      --------->MYB46(3)--------->LBD16     <---------ANAC55(2)  ------>ZmHOX2a(1)         <--------- --------->LBD16      <---------LBD16       --------->ANAC55(2) <---------ANAC58         <-----------HVH21 ------->LBD16------>NtERF2      ----------->HVH21              <---------ANAC58 <------NtERF2 ----ALFIN1<---------ATERF1(1)  <---------ANAC58           <---------DEAR3(2)<---------RAP2.3(1)    < --->ANAC46<---------DEAR4(2)   <---------ANAC58           <---------MYB46(3)<---------RRTF1(1)     < --ALFIN1--------->MYB46(3)    --------->At4g35610      <-----------HVH21  <---------LBD16 <---------WRKY12   ccccagaaacaaccggcgccaaattgcgcgaattgctgacctgaagacggaacatcatcgtcgggtccttgggcgattgcggcggaagatgggtcagctt  12899800                                                                         <------NtERF2                                                                    <------MYB83      <------ZmHOX2a(1)                                             <------MYB46(1) <----------DOF2                                                   <---------AtMYB61 ->ZAT2                     --------->At4g35610              --------->LBD16 ->At4g35610                <-------GAMYB                   --------->ANAC46 --At4g35610               <---------MYB46(3)            --------->ARR14(2)<---------HSFB2a(2) --ZAT2               --------->LBD16              <---------ARR14(2)  <---------DEAR3(1)    <------ZmHOX2a(1) --RAV1(2)        <---------ARR14(2)       --------->ATHB12<---------LBD16--------->ETT(2)  <-------- ---------ANAC58  --------->GLK1(2)--------->DAG2  --------->ARR14(2)  <---------MYB46(3)---------->DOF2 ---------ANAC58  --------->ARR14(2)   <---------MYB46(3)<---------ARR14(2)--------->HSFB2a(2)   gggcttgaggacgagacccgaatccgagtctgttgaaaaggttgttcattggggatttgtatacggagattggtcgtcgagaggtttgagggaaaggaca  12899900                                                                             --------->At4g35610                                                                         <----------CDC5                                                                       <---------DEAR3(1)                                                                      --------->ATERF1(1)                                                                      <------NtERF2                                                                     <---------ATERF1(1)                                                                     <---------DEAR4(2)                                                                     ------>NtERF2                                                                     <---------ORA47(2)                                                                     <---------RAP2.3(1)                                                                     <---------ERF1                                                                    --------->DEAR3(1)                                                                    <---------DEAR3(1)                                                                    <---------RAP2.3(3)                                                                    <---------ANAC46                                                                    <---------ATERF1(2)                                                                    <---------RAP2.3(2)                                                                    --------->ATERF1(2)                                                                   <---------ABI4(1)                                                                   <------NtERF2                                                                   ------>NtERF2                                                                   --------->ATERF1(1)                                                                  <---------DEAR4(2)                                                                  <---------RAP2.3(1)                                                                  <---------RRTF1(1)                                                                  <---------ATERF1(1)                                                                 <---------RRTF1(2)                                                                 <---------RAP2.6(2)                                                                 <---------RAP2.3(2)             ----                              <----------DOF2                    <---------DEAR3(1)              <---                          <---------RAP2.6(2)                   <-------TEIL <---------At4g35610<----                        --------->ALFIN1                        <---------LBD16          ----------->HVH21                ---------->DOF2                                --------->ALFIN1        --------->CCA1(2) --ID1    <---------LBD16 <---------DEAR3(1)                 --------->CCA1(2)     <------ZmHOX2a(1)   aatgggtttggctctggagaaagagagtgcggctttagagagagaattgagaggtttagagagagatgcggcggcgatgagcggaggagagacgacgagg  12900000                             >>>>>>>>>SARD1                      ----------->GT1                   <---------ANAC58                   <---------ANAC55(1)                   --------->ANAC55(2)                   <---------ANAC55(2)                   <---------ANAC46                   --------->bZIP60(1)                   <---------bZIP60(2)                                                           <---                   --------->O2                                                                  ----                   =============================bZIP_DOF                                         <---                   <---------ANAC58                                                              ----                   <---------O2                                                                  ----                   --------->TGA1a                                                           <-------                   <---------bZIP60(1)                                                      <--------                   <---------TGA1a                                                        <---------GLK1(2)                  <-----------------------TaNAC69(2)                                   <---------HSFB2a(2)         ---------->DOF2     >>>>>>>>>CBP60g                                           <---------HSFC1(1)         ====================bZIP_DOF                              <-----------GT1     >>>>>>>ZML2---       <---------YAB1--------->ALFIN1                             <---------CCA1(2)    --------->HSFB2a(2) ----->ARR14(2)   ----------->STF1                          <---------AHL20(2)         --------->HSFC1(1) ------ARR14(2) ----------->TGA1                           <---------YAB1       <------------CBF<---- --ZmHOX2a(1)   ----------->HVH21    <----------DOF2    --------->AHL20(2)*TSS --------->ATHB12<-----   acctgcattatcaaagcagtgacgtggtgaaatttggaacttttaagaggcagatagatttattatttgtatccattttcttcattgttctagaatgtcg  12900100                                                             <---------PCF2                                                        <-----------RAV1(1)                                                      <---------GLK1(1)                                                      --------->CCA1(2)                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                               <---------ATHB12                                            --------------->AGL15                                           ------------>CBF ----------->TCP11(1) ------ANAC55(2)                           ----------------->AGL1 ----->ANAC58                              ----------------->AG ---NtERF2                                 <-----------------AGL1 ----->ANAC58                              <-----------------AG<---------ANAC46 ----->ANAC55(2)                           ----------------->AGL2 ----HVH21                                 <-----------------AGL3 ---RAV1(1)                                <-----------------AGL2 ------>LBD16                <-----------GT1<---------------AGL15 -----LBD16           ------>ZmHOX2a(1)    ----------------->AGL3 --------->REM1(2) ----ANAC46          --------->TOE2(3)<-----------RAV1(1) --------->ALFIN1 --------->GLK1(2)   cggaacaaattttaaaactaaatcctaaatttttctaattttgttgccaatagtggatatgtgggccgtatagaaggaatctattgaaggcccaaaccca  12900200                                                         --------->GLK1(2)            <----------DOF2                                                        <---------GLK1(2)        ------->MYC3                           <----------DOF2           ----------->RAV1(1)         <-------MYC3                        <---------ANAC58             <---------ALFIN1           --------->O2                 --------->MYB52(2)                =======================================MYC_MYB                <-------TEIL   <---------YAB1      ------->GAMYB                =================bZIP_DOF             <---------HSFB2a(1)                  --------->ANAC58              <---------TGA1a             --------->HSFB2a(1)                  --------->ANAC46              --------->TGA1a   <---------bZIP60(2)  <---------ANAC58          --------->ANAC58          <---------MYB52(2)   <---------ANAC58     <---------ANAC46     ------>NtERF2     <---------ZAT2   <---------O2   <---------ANAC58    ---------->ID1    --------->MYB52(2)    --------->ZAT2 --------->MYB52(1)    -   tactgacgagcccaaaggttcgttttgcgttttatgtttcggttcgatgccaacgccacattctgagctaggcaaaaaacaaacgtgtctttgaatagac  12900300                                            <-------PIF5                                            -------->ABF1                                            <-------MYC2                                            ------->MYC4                                            <-------MYC3                                            ------->MYC3                                 ------>NtERF2                                --------->ANAC58                                --------->ANAC58                                --------->ANAC46                               ----------->HVH21                                <---------TGA2(1)                             <-------MYC2                                --------->TGA2(1)                             <-------MYC3                                --------->bZIP60(1)                           ------->MYC3                                <---------bZIP60(1)   <------------CBF        ------->MYC2                       <------NtERF2        ------->MYC2                     --------->O2                    <---------At4g35610     ------->PIF5                     <---------TGA1a                    --------->At4g35610     <-------MYC4                     --------->TGA1a                   <---------ATERF1(1)     --------->O2                      <---------O2                   <---------MYB46(3)      --------->TGA1a<---------ANAC58   --------->bZIP60(2)                   <---------RAP2.3(1)     <---------O2   <---------AtLEC2   --------->ANAC58                  <---------DEAR3(1)       <---------TGA1a<---------ANAC58   --------->ANAC58                 <---------At4g35610       --------->ANAC55(2)               --------->ANAC55(1)            <-------MYC2      <---------TGA2(2) <---------ANAC58             --------->ANAC55(2)            ------->MYC3      <---------ATERF1(1)  ------------>CBF          <---------ANAC55(2)            <-------MYC3     ----------->HVH21  <---------ANAC58             --------->ANAC46    ----            ------->MYC2     ----------->TGA1   <---------ANAC46             ========================     --------->DOF5.7(2)<---------AtLEC2   --------->ANAC46             ----------->HVH21        ---- ----->ZmHOX2a(1)--------->At4g35610       <---------ANAC55(2)        <------------CBF        <------   tcctctcgttaacacatgcagcggctgcatggtgacgccattaacacgtggcctacaattgcatgatgtctccattgacacgtgacttctcgtctccttt  12900400     <---------ARR11(3)    <---------CCA1(2)   --------->ARR11(3)   <---------AHL20(1)   <---------AHL20(2) -------->P    --------->ARR11(3)   <---------ARR11(3) ------>MYB83  --------->AHL20(1)   --------->AHL20(1) ------>MYB46(1)    --------->ANAC46              --------->ARR11(3) ----->TOE2(3)       ------>ZmHOX2a(1)  *TSS   <----------DOF2         <---------ARR11(3) ====bZIP_DOF  <---------ALFIN1     <---------ARR11(3)                <---------GLK1(2) ----->YAB1    --------->ZAT6      --------->AHL20(2)              --------->YAB1 ----DOF2  --------->MYB46(3) --------->HSFB2a(2)       --------->WOX13(1)   cttaatatatctaacaaacactcctacctcttccaaaatatatacacatctttttgatcaatctctcattcaaaatctcattctctctagtaaacaagaa  12900500             <-------TEIL                                                                           <            --------->CCA1(2)                                                                       <           --------->ARR14(2)                                                                      --           <---------ARR14(2)         <---------YAB1                                             <---          <------NtERF2              <---------ARR11(3)                                          ----         <---------MYB46(3)      --------->ANAC58                                                ----        <---------ANAC46         --------->ANAC58                                               -----        <---------ANAC58    --------->ANAC46                            ----------->HVH21       <----        <---------ANAC58<---------ARR14(2)     <------NtERF2           <------NtERF2           <-----       <---------LBD16  --------->ARR14(2)  --------->At4g35610--------->ATHB12           --------->At4g35610 --------->AHL20(2)    <------ZmHOX2a(1) --------->At4g35610  <---------ATHB12          <-----------RAV1(2)   caaaaaaatggcggatacagctagaggaacccatcacgatatcatcggcagagaccagtacccgatgatgggccgagaccgagaccagtaccagatgtcc  12900600  Previous    Next  AGI:  At4g25130.1    Description:  peptide methionine sulfoxide reductase, putative. Identical to Peptide methionine sulfoxide reductase (PMSR) [Arabidopsis Thaliana] (GB:P54150;GB:Q9SW13); similar to PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1), peptide-methionine-(S)-S-oxide reductase [Arabidopsis thaliana] (TAIR:AT5G61640.1); similar to PMSR protein [Brassica napus] (GB:CAA62760.1); contains InterPro domain Methionine sulphoxide reductase A; (InterPro:IPR002569) Range:  from: 12898601    to: 12900074    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g25140.1    Description:  OLEO1 (OLEOSIN1). Identical to Oleosin 18.5 kDa [Arabidopsis Thaliana] (GB:P29525); similar to OLEO3 (OLEOSIN3) [Arabidopsis thaliana] (TAIR:AT5G51210.1); similar to Oleosin Bn-III (BnIII) (GB:P29110); contains InterPro domain Oleosin; (InterPro:IPR000136) Range:  from: 12900440    to: 12901587    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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