Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->ANAC58                       --------->ANAC58                --------->ANAC58                      <---------TOE2(3)                --------->ANAC58                 --------->ANAC58         <-----------GT1                --------->ANAC46                 --------->ANAC46        <-----------GT1     <-----------GT1 <---------ALFIN1            --------->ANAC58<---------ARR11(3) --->NtERF2   <-----------GT1         <-------TEIL  ---------->DOF2<---------ICU4    ---------->DOF2 --DOF2 <----------DOF2--------->ANAC46     <-------TEIL     --------->YAB1  ------>ZmHOX2a(1)   ctccaattttctttattcacgacacacgctcacataaacatacacatacacacacaaaggtaatcaaaatcattttttcctgctcgacaaagcttagaag  12876600                                                                                 <---------ANAC55(1)                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                                 <---------ANAC46                               <----------DOF2                                  --------->MYB52(2) --                              <---------ANAC58                     <---------ANAC58       <----------                              <---------ANAC58                     <---------ANAC58     --------->YAB1    ---------->DOF2--------->REM1(1)              <---------MYB46(3)        ----------->GT1        <-   aaacacaaaagaattcatactacatctgttttgctttcagactgtgttccaattgttgatatatgtttggcttccatgttgttacttgtataatactctt  12876700            <---------MYB52(2)       --------->ANAC46                                                           <---------AHL20(2)       --------->ANAC58                                                          --------->AHL20(2) ------->DOF5.7(2)                           --------->At4g35610            <---------AHL20(2) -GT1  --------->ANAC58                    --------->DAG2                   --------->AHL20(2) --------MYB52(1)                         ---------->DOF2               --------->AHL20(2)   <-------   cgttacctcacccaaataacccaaatacaggttttttgagaacaaaaagctgaatttcatatagttaggggcaaaaatataaattttatatagttgaggg  12876800                                               ---------->DOF2                      <---------TCP15(1)                                            --------->YAB1                          --------->PCF2                                  --------->TOE2(3)                                <---------PCF2                                  ----------->GT1                                  --------->TCP15(1)                                  --------->TOE1(3)                          <---------TOE2(3)                           <---------------------WRI1                        <---------YAB1                        --------->DAG2     <---------YAB1                <----------DOF2      ---------->DOF2 ---------->DOF2--------->AHL20(2)       ----------->HVH21    <-----------HVH21 --ANAC46     <---------ANAC46   ----------->GT1    --------->GLK1(2)  --------->LBD16   caaaactagaaagtttgtgtataaaaaaggtcgaaacgttaaaatatgataaagaaactggtctgtgacataccgcattaagatgggtcccatagaaatc  12876900                                      --------->YAB1                                      --------->TOE2(3)                                    <---------TOE2(3)               ------>ZmHOX2a(1)   <---------DOF5.7(2)        ==============HOX2a_HOX2a  --------->MYB52(1)        ===============================HOX2a_HOX2a        ------>ZmHOX2a(2)       <------ZmHOX2a(1)      --------->ARR14(2)      --------->LBD16      <---------ARR14(2)     <---------LBD16  <---------ALFIN1         --------->ANAC58           <--   --------->ALFIN1 <---------CCA1(2) --------->TOE1(3)   *TSS         --------->ANAC58    <---------   gaaatgtggatcgtctccttccctatcttatccaggataacgataacaacactctctctctcactgcaagagcgcgaaacagagtaaggctcactttgtt  12877000                                                                                       <---------ALFIN1                                                                                      <---------ALFIN1                                      <---------ANAC58                           --------->GLK1(1)                                      <---------ANAC58                           <---------GLK1(1)                                      --------------------->WRI1                <---------ARR14(2)                         <---------ANAC58                                       <---------GLK1(2)                         <---------ANAC46                               <---------ANAC58 --------->ANAC46                         <---------ANAC58                               <---------ANAC58 --------->ANAC58  <----------DOF2   ---------->DOF2   <---------ANAC46                <---------ARR11(3) --------->ANAC58 ---------GT1       <---------ICU4 ------>ZmHOX2a(1)     ------>ZmHOX2a(1)      --------->ARR14(2) -DOF2   ------>ZmHOX2a(1) <---------MYB52(1)           --------->TOE2(3)     <---------TOE1(2)     <   ttagctttctcctctacttcgataatgccgtttgctccttccttgttgtcatcgtcttcctcagtctctcaatttcttcccagattccccaacgcgacta  12877100                                    <------NtERF2                                    --------->ATERF1(1)                                   <-----------HVH21                                  <---------DEAR3(1)                                  <---------O2                               --------->DEAR3(1)                              --------->DEAR3(2)                              <------NtERF2                             ------>NtERF2                            --------->DEAR3(1)                           --------->ERF1                           <---------ABI4(2)                           --------->MYB46(3)                           <------NtERF2                           --------->ATERF1(1)                          <---------ATERF1(1)                          ------>NtERF2                          <---------RAP2.6(3)                         --------->DEAR3(1)                         --------->ANAC58                         <---------ATERF1(2)                         >>>>>>>>>AtERF-5                         --------->RRTF1(3)                         >>>>>>>>>AtERF-2                         >>>>>>>>>AtERF-3                         >>>>>>>>>AtERF-4                         >>>>>>>>>>AtTINY2                         >>>>>>>>>AtERF-7                         --------->ANAC58                         --------->RAP2.6(2)                         --------->RRTF1(2)                  <---------LBD16                         --------->ATERF1(2)                <---------LBD16                         --------->ANAC46                  <---------ZAT2                         --------->RAP2.3(2)               --------->ZAT2                         >>>>>>>>>AtERF-1                 ------>MYB83                         --------->RAP2.3(3)              ------>MYB46(1)                        --------->ERF1                ------>MYB83                        --------->RAP2.3(1)         --------->MYB46(3)                        --------->RRTF1(1)          --------->DEAR3(1)                        --------->ATERF1(1)         --------->DREB2C(2)                       <---------ATERF1(1)          --------->DEAR4(1)                      --------->ARR14(2)            <---------MYB46(2)                  <---------ZAT2  --------->O2 <-----------HVH21   --------->ETT(2)                 -                  --------->ZAT2<-----------HVH21  --------->DEAR3(2)                         -------                  <---------At4g35610          <-----------TGA1<------NtERF2          <---------SPL7<                  --------->At4g35610  <------NtERF2----------->HVH21             ------->GAMYB<-----              --------->ANAC46--------->MYB46(3)----------->HVH21  <---------ETT(2)  --------->DEAR3(1)       ------->TEIL ----------->ARR10 <---------LBD16--------->ORA47(1)           ------------------>SPL14       <-----------GT1<---------ARR14(2) <------NtERF2------>MYB46(1)            --------->MYB46(3) - -------TEIL <---------LBD16<---------ALFIN1  --------->ANAC46--------->LBD16 --------->MYB46(3)   <-   gattcaatgtaactccacggagcagagccgccaccgtcgtcgcggcatccgtcaccgacctagccggggtcgacagtacaacaatcgccgtactcggtgg  12877200                                                       --------->ARR14(2)                                                      <------NtERF2                                                     --------->LBD16                                              --------->ALFIN1                                        =====================================HOX2a_HOX2a                                        ===============HOX2a_HOX2a                                        <---------LBD16<---------ARR14(2)           <---------ALFIN1    ===============HOX2a_HOX2a       --------->At4g35610     ================HOX2a_HOX2a    --------->LBD16           --------->TOE2(3)     <---------ANAC46   --------->ANAC55(2)        --------->TOE1(3)    <------NtERF2   <---------ANAC55(2)  <---------MYB46(3)--------->LBD16                     <---------DEAR3(1)  ------>ZmHOX2a(2)    <---------AtMYB61------>ZmHOX2a(2)                     <---------ANAC46  ====================================HOX2a_HOX2a--------->ALFIN1            <---------LBD16 =====================================HOX2a_HOX2a<---------DEAR3(1)          <------NtERF2 <------ZmHOX2a(2)  <---------DEAR3(1) ================HOX2a_HOX2a         <---------DEAR3(1) -------->GLK1(2)  ------>NtERF2       <------ZmHOX2a(2)         --------->ALFIN1<---------DEAR3(1) -->ALFIN1--------->At4g35610----------------->AGL1<---------LBD16 <------NtERF2--------->ATERF1(1) ---------ARR14(2) <------NtERF2      --------->ARR14(2)        --------->ATERF1(1) ----MYB46(3)    <---------DEAR3(1)   <---------ARR14(2)     <-----------RAV1(2)<------NtERF2 <------ -------->ARR14(2)--------->LBD16--------->MYB52(1)--------->ATERF1(1)<------ZmHOX2a(1)    <------ZmHOX2a(1) -----ZmHOX2a(1)<---------LBD16------>ZmHOX2a(1)<------ZmHOX2a(1)<---------DEAR3(1)<------NtERF2   aggatccgtagcagcactcgcggcgatggtttccttaacggatccggagaggaggcggaaattgcaggcggaggaagttggcggaggcgataaggaggtt  12877300                                            ------>ZmHOX2a(2)                                           <------ZmHOX2a(2)                                           --------->CCA1(2)                                          --------->ARR14(2)                                          <-----------ARR10                                       <--                                          --------->ARR11(3)                        --------->KAN4(2)                                          <---------ARR14(3)                       --------->GLK1(1)                                          <---------ARR11(3)                       --------->KAN4(1)                                          --------->ARR14(3)                       <---------KAN4(1)                                          --------->AGP1                           <----------TaMYB80                                          <---------ARR14(2)                       <---------GLK1(1)                                        ----------->ARR10                         --------->ARR11(3)                              <---------AtMYB61                                   <---------ARR14(2)                           <---------HSFB2a(2)                                    --------->ARR14(2)                           --------->HSFB2a(2)                                    <---------ARR11(3)                    <-------PIF5      =============HOX2a_HOX2a            <---------ZAT14      ------                    ------->PIF5      <------ZmHOX2a(1)                   --------->ZAT14     <------ -GAMYB           <---------LBD16--------->ALFIN1             ----------->GT1    <------ZmHOX2a(1)---   gtgagggagtatttcaatagcacggggttcgagaggtggaggaagatctacggtgagactgatgaagtgaatcgagtacagaaggatattcgactcggtc  12877400                                                                                  --------->TCP20                                                                                  --------->ARR14(2)                                                                               <---------HSFB2a(2)                                                         ----------->HVH21     --------->HSFB2a(2)                                                        <-----------HVH21    <---------MYB46(3)                                                       ----------->HVH21   <---------MYB52(1)                                                     <---------DEAR3(2)    <-------GAMYB                                                    <---------DEAR3(1)    <---------DEAR3(2)                                              <---------ANAC58            <---------MYB46(3)                                              <---------ANAC58           <---------DEAR3(1)                                             ------>ZmHOX2a(2)          <------NtERF2                                            <------ZmHOX2a(2)          ------>NtERF2                                           <---------GLK1(2)           <---------RAP2.3(1)                                           <---------ARR14(2)         --------->DEAR3(1)         --------->ALFIN1                  --------->ARR14(2)         <---------DEAR3(1)      <---------DEAR3(1)    <---------At4g35610     <---------MYB46(3)<---------O2<---------ARR14(2) -------YAB1                --------->At4g35610    <---------ORA47(1) --------->O2--------->TCP16(1) --->WRKY18(1)         <---------ANAC58    --------->ARR11(3)        --------->ATERF1(1) -----HVH21            <---------ANAC58    <---------ARR11(3)       <---------ATERF1(1) <---------MYB52(1) ------>AtLEC2    --------->ANAC46       ----------->ARR10         ----------->HVH21   <---------MYB52(1)   atgctaagacggtggagaacacgatgcttatgctgactgaagatagatccttggccggtgtcacggtttgcgacgccggttgtggaaccggtttgctctc  12877500  Previous    Next  AGI:  At4g25070.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G48860.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO68373.1) Range:  from: 12872456    to: 12876744    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g25080.1    Description:  CHLM (MAGNESIUM-PROTOPORPHYRIN IX METHYLTRANSFERASE); magnesium protoporphyrin IX methyltransferase. similar to unnamed protein product [Vitis vinifera] (GB:CAO68385.1); contains InterPro domain Magnesium-protoporphyrin IX methyltransferase, C-terminal; (InterPro:IPR010940); contains InterPro domain Magnesium protoporphyrin O-methyltransferase; (InterPro:IPR010251) Range:  from: 12876958    to: 12878657    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version