Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->ANAC58                                                                 --------->ANAC58                                                      --------->ZAT6                  --------->AHL20(2)                <<<<<<<<<<<<<<<<<LFY                 --------->YAB1                   <---------ANAC58          --------->ANAC58     ------->TEIL     <---------YAB1<------NtERF2                     <xxxx        ---------->DOF2     --------->ALFIN1<---------------------WRI1                        ------>MYB83 -------DOF2    --------->AHL20(2)       <------ZmHOX2a(2)   ------>NtERF2                    ------>MYB46(1) -----GT1 --------->ANAC58 <---------------AtSPL3 <---------ANAC58               --------->CCA1(2)   tttgttaagagaaagcaaataaaaatagaagtgtacgtttgagatcgatgatgcttacactggtgccaagaaaacgatgaacgatatgatgttacctaca  12856200                                                                                                    <                       ----------->GT1                  --------->ARR11(3)                          <                     ---------->DOF2                    >>>>>>>>>>GT-1                             --            ---------->DOF2                   --------->YAB1                                     ----  <-------TEIL --------->YAB1              --------->YAB1   ----------->GT1  <-----------GT1  <------ xxxxxxxxxxxxxxxxsmallRNA(fl3)          ------->TEIL   --------->YAB1   <---------ANAC46<---------AHL20(2)   aaaatacatataggtaaagataacaaagttaaatttgatatgcacttataagaacaatgatatagtatatagttttgtataacttgatgtttatttatga  12856300                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                    <---------ARR14(2)                                      --------- ---------ANAC58               ------->GAMYB                                           --------->ZAT14 ---------ANAC58              <------------AtMYB77                                 <---------ARR11(3) ------->ATHB12 <------ZmHOX2a(1)   --------->ARR14(2)                            <---------ZAT2 --->TEIL     --------->LBD16 --------->MYB46(3)                                --------->ZAT18 ---YAB1  -------->P        ------->TEIL    <---------YAB1  <---------TOE2(3)   <---------ZAT18   atgcttgaaacttacccaggactccaaatgtaactgccaatacgttgtgagtgagaaccattttggttattttgtgaatgagcgagctcttcagtatctt  12856400                                                                 ------>ZmHOX2a(2)                                                                 ========================HOX2a_HOX2a                                                                <------ZmHOX2a(2)                                                                =========================HOX2a_HOX2a                                                               <---------ARR11(3)                                                               --------->AGP1                                                               <---------ARR14(2)                                                               --------->ARR14(2)                                                               <---------ARR14(3)     <---------YAB1                                            --------->ARR14(3)  <----------DOF2                                      --------->AHL20(1) -ARR11(1)                                      ----------->GT1--------->ARR11(3) ---ARR10                                      ----------->GT1<---------GLK1(1) >ARR14(2)          <------NtERF2  ====================================HOX2a_HOX2a -ARR11(3)        <---------ANAC46 =====================================HOX2a_HOX2a -ARR14(2)        --------->ETT(1) <------ZmHOX2a(1)   --------->ARR11(3) >GLK1(2)       <-----------HVH21 ----------->GT1      <---------AHL20(1) >ARR11(3)     --------->ALFIN1  <---------TOE2(3)    --------->AHL20(2)          ------>ZmHOX2a(1)   tctacttttgaatgggagtgtcggagaaaactaataaggaaacaagagaagggaaaatatatagagatcttcgactcttgattcctctatttgagttttc  12856500                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                               <-----                                                                                              <------                                 --------------->AGL15                                      <------NtERF2                             --------->ZAT18                                              <---------DEAR3(1)                          <---------MYB46(3)                                           --------->TGA1a                    ------>NtERF2<---------------AGL15                                 ==============                <---------ANAC58<-----------------AGL3                                 <---------bZIP60(2)                <---------ANAC58----------------->AGL3                                 <---------bZIP60(1)          <-----------GT1<---------ATHB12          *TSS                                <---------TGA1a         --------->AHL20(2)  <---------ZAT18    ----------->GT1       --------->AtLEC2 --------->bZIP60(1)   ttcgatatgaattaactagcgaggccaatggttcactatatatagagacatggtaatatgtgtaatggttccatgcttatatgctagggacgtcgtcgtt  12856600                                           <---------RVE1(1)     ---------->DOF2                      <---------ARR11(3)                          <-----------RAV1(1)  --------->At5g28300                     --------->ARR11(3)          <---------AHL20(1) -------ANAC46                 --------->MYB52(1)                     --------->AHL20(1) -------ANAC58               <---------WOX13(1)                       --------->ARR11(3)      ------- -------ANAC58              <------------CBF              <---------------AGL15    <---------AHL20(2) ----MYB52(1)               --------->ARR14(2)            --------------->AGL15   <---------AHL20(2) ---DEAR3(2)                <---------ARR14(2)     <---------TOE2(3)  <---------ARR11(3)      <------ ===============bZIP_DOF  <---------TOE2(2)<---------CCA1(1)     ----------->GT1  --------->AHL20(2)   tcgtggtaaaagagagagaagaacatcgcagattgacggtctcagatatttctatggtttttaaaaatggaaaatattcgataattttatgtggtatgca  12856700                                                          --------->YAB1                <----------DOF2                                                         <---------YAB1              ---------->ID1 -    <---------ANAC58                               <---------YAB1                <----------DOF2   --    <---------ANAC46                               --------->AHL20(2)   ----------->HVH21        ----    <---------ANAC58                    --------->TOE2(3)<---------TOE2(3)   <----------DOF2     ---- -->ZAT18    <---------YAB1<----------DOF2         <---------AHL20(2) --------->ANAC55(2)   <-------- ---ZAT18   <---------AHL20(2)       <---------ALFIN1 <---------YAB1<---------AHL20(2) --------->TOE2(3)   ctcttggcgtgtattattttggtgtcaaacttttatgccaaaccttggtttatattattatcgtagtcatttaagtgacctttctttttcctttaaacca  12856800                                                                                              -------                                                                                              <------                                                                                              <------                                                                                             <-------                                                                                             --------                                                                                             --------      <---------AHL20(2)                                                                     <-------     --------->AHL20(2)                                                                   --------->AHL20(2)     <---------AHL20(2)                                                                  <---------ATHB12   --------->YAB1                                                                  <---------WRKY18(1) --------->AHL20(2)                                                               ----------->HVH21 -------->YAB1                                                                  <---------ANAC58    < ------->AHL20(2)                                             ----------->GT1   <---------ANAC58  --- -->MYB46(1)                     <---------ZAT14 --------->TOE2(3)              <---------AtLEC2  <-- -->MYB83       --------->AHL20(2)      ---------->DOF2   --------->ATHB12 <----------DOF2--------->YAB1 ---GT1       <----------DOF2    --------->ZAT14 --------->TOE1(3)     ---------->ID1    <---------ATHB51   aataaaaataaatgagcttttaatataggcgttactaaactgcaaagaaacccttaaaacttattggtaatttgttcctttggcatgaccaataatataa  12856900                                                      <---------AHL20(2)                                                 --------->ARR11(3)                                                 --------->AHL20(2)                                          --------->AHL20(2)                                         <---------AHL20(2)       --------->ATHB12            ------>MYB46(1)    --------->AHL20(2) -->AHL20(2)                       --------->AtLEC2  --------->AHL20(2) ---YAB1  ------>ZmHOX2a(2)   --------->MYB52(1) <---------AHL20(1)                     <---------ANAC55(2) ---AHL20(2)                <---------MYB52(2)   --------->AHL20(1)                     --------->ANAC55(1) --AHL20(2)                --------->STY1(2) <---------AHL20(2)                   <---------AHL20(2) ->AHL20(1)   ----------->HVH21    ------>MYB83  <---------AHL20(2)      --------->ATHB12 ->AHL20(2) <---------At4g35610  ------->GAMYB   <---------ARR11(3)      <---------ICU4 --------->ANAC55(2) --AHL20(1) --------->At4g35610 --------->MYB46(3)<---------AHL20(2)    <---------YAB1  --------->ANAC46 -----------GT1            <---------At4g35610--------->AHL20(2)        --------->ICU4  --------->ANAC58 ------>AHL20(2)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        --------->YAB1    --------->ANAC58 -------AHL20(2)     <----------DOF2     --------->AHL20(2) <---------YAB1        --------->AHL20(2)   ttaaaccattgatcggctgatagctttctagctaaccatccaaataaataatatatttaattttgatggttttcatcattgtattaaaaaacgtaatcta  12857000                                               <---------CCA1(1)                                               <---------RVE1(1)                         <-----------RAV1(1)                                              --------->ARR11(3)        --------->ARR11(3)                                  --------->AHL20(2)                    <---------ARR11(3)                                  --------->AHL20(1)       <---------SPL7--------->CCA1(2)                                  <---------AHL20(1)       --------->LBD16  <-----------GT1----------                            --------->STY1(2) <---------ARR11(3) ------->MYC3        <----------DOF2                 <------ZmHOX2a(1)<---------AHL20(2)   ------------------>SPL14   <---------ARR11(3)            -------->P      <---------STY1(2)<<<<<<<<<RAP2.2     <-------MYC3    --------->REM1(1)---   attttccaatattctaccaggactcaaactagctaattaattagtttagatatttgttctccgtacacatgtaagatataactacatctttttgttgcca  12857100  Previous    Next  AGI:  At4g25010.1    Description:  nodulin MtN3 family protein. similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT5G50800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68342.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71371.1); contains InterPro domain MtN3 and saliva related transmembrane protein (InterPro:IPR004316) Range:  from: 12854395    to: 12856551    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version